BLASTX nr result

ID: Atractylodes22_contig00016599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016599
         (1001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...   346   4e-93
ref|XP_002529286.1| pentatricopeptide repeat-containing protein,...   331   2e-88
ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|2...   299   6e-79
ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containi...   298   2e-78
gb|AAB65486.1| membrane-associated salt-inducible protein isolog...   293   4e-77

>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic [Vitis vinifera]
            gi|298204537|emb|CBI23812.3| unnamed protein product
            [Vitis vinifera]
          Length = 659

 Score =  346 bits (888), Expect = 4e-93
 Identities = 183/325 (56%), Positives = 239/325 (73%), Gaps = 1/325 (0%)
 Frame = +3

Query: 30   MEISPVLGHGMQSIFFTVSPLP-LPFSTRPIKNSQRQCXXXXXXXXXXNNCRTLRNQSHD 206
            MEIS VLG G + +   +SPLP L     P+ ++ R             +  +    +H 
Sbjct: 1    MEIS-VLGGGFKQVITRLSPLPSLSSPASPLPSTTRAKSSHLTSATPPLHKESQIEPTH- 58

Query: 207  GASVNSSPKSKEYTSISRQARRLSILDIQQSPDLQLALSRSGSVLKGQDFNVVMRHLGKQ 386
               V+ +P+ K   S+  +AR+ +IL++QQS DL  AL+R G +LK QD NV++RH GK 
Sbjct: 59   ---VSVTPR-KRCHSVGYKARQSAILEVQQSSDLGSALARLGDMLKVQDLNVILRHFGKL 114

Query: 387  NRLKDLSQLFEWMLQNGKLNFASYSSYVKLMGKSLHPNKALEIYSGIEDKLTRVNPSVCN 566
             R +DLSQLF+WM ++ K+ F+SYS+Y+K MGKSL+P KALEIY+ I+D+  R N SVCN
Sbjct: 115  CRWQDLSQLFDWMQKHEKITFSSYSTYIKFMGKSLNPIKALEIYNSIQDESVRNNVSVCN 174

Query: 567  SVLGCLTKSGKLESSLELFRRMKQDGLVPDVVTYSTLLAGCAKVQDGYKKAMELVQELQK 746
            SVL CL ++GK E+SL+LF +MKQDGL PD VTYSTLLAGC KV+ GY KA+ELVQE+++
Sbjct: 175  SVLSCLIRNGKFENSLKLFHQMKQDGLRPDAVTYSTLLAGCMKVKHGYSKALELVQEMER 234

Query: 747  KGLQMDSVIYGSLISVCASCNQCKEAEGYFNQMKIEGHIPNVFHYSSLLNAYSVDGNYEK 926
              L MDSVIYG+L++VCAS N+CKEAE YFNQMK EGH+PNVFHYSSLLNAYS DG+Y+K
Sbjct: 235  SRLPMDSVIYGTLLAVCASNNRCKEAENYFNQMKDEGHLPNVFHYSSLLNAYSADGDYKK 294

Query: 927  AEEIFREMKSVGLVPNKVVLTTLLK 1001
            A+ + ++MKS GLVPNKV+LTTLLK
Sbjct: 295  ADMLVQDMKSAGLVPNKVILTTLLK 319


>ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223531275|gb|EEF33118.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 672

 Score =  331 bits (848), Expect = 2e-88
 Identities = 156/251 (62%), Positives = 207/251 (82%)
 Frame = +3

Query: 249  SISRQARRLSILDIQQSPDLQLALSRSGSVLKGQDFNVVMRHLGKQNRLKDLSQLFEWML 428
            S S  AR+ +IL++QQSPDL  AL R G++LK QD NV++R+LGKQ+R +DLS+LF+WM 
Sbjct: 80   SKSYLARQAAILEVQQSPDLDSALRRLGAILKAQDLNVILRNLGKQSRWQDLSKLFDWMQ 139

Query: 429  QNGKLNFASYSSYVKLMGKSLHPNKALEIYSGIEDKLTRVNPSVCNSVLGCLTKSGKLES 608
            Q+ K++ +SY+SY+K MGKSL+P KALEIY+ I D+  + N  +CNSVL CL +SGK + 
Sbjct: 140  QHSKISVSSYTSYMKFMGKSLNPAKALEIYNSIADESVKNNVFICNSVLSCLVRSGKFDI 199

Query: 609  SLELFRRMKQDGLVPDVVTYSTLLAGCAKVQDGYKKAMELVQELQKKGLQMDSVIYGSLI 788
            SL+LF +MKQ+GL PD +TYSTLL+GC K +DGY K ++ VQEL+  GLQMD+VIYG+++
Sbjct: 200  SLKLFHKMKQNGLTPDTITYSTLLSGCIKAKDGYSKTLDFVQELKYNGLQMDTVIYGTIL 259

Query: 789  SVCASCNQCKEAEGYFNQMKIEGHIPNVFHYSSLLNAYSVDGNYEKAEEIFREMKSVGLV 968
            +VCAS N+C+EAE YF+QMK EGH+PNVFHYSSLLNAY+  GNY+KAEE+ ++MKS+GLV
Sbjct: 260  AVCASHNRCEEAESYFSQMKNEGHLPNVFHYSSLLNAYASSGNYKKAEELVQDMKSLGLV 319

Query: 969  PNKVVLTTLLK 1001
            PNKV+ TTLLK
Sbjct: 320  PNKVIWTTLLK 330



 Score = 61.2 bits (147), Expect = 4e-07
 Identities = 42/146 (28%), Positives = 80/146 (54%), Gaps = 1/146 (0%)
 Frame = +3

Query: 564 NSVLGCLTKSGKLESSLELFRRMKQDGLVPDVVTYSTLLAGCAKVQDG-YKKAMELVQEL 740
           +S+L     SG  + + EL + MK  GLVP+ V ++TLL     V+ G ++K+ +L+ EL
Sbjct: 291 SSLLNAYASSGNYKKAEELVQDMKSLGLVPNKVIWTTLLK--VYVRGGLFEKSQQLLLEL 348

Query: 741 QKKGLQMDSVIYGSLISVCASCNQCKEAEGYFNQMKIEGHIPNVFHYSSLLNAYSVDGNY 920
           +  G   D + Y  L+   +   +  EA  +F++MK +    + + YS +++AY      
Sbjct: 349 ETLGYAEDEMPYCLLMDGLSKAGRVDEARSFFDEMKEKNVKSDGYAYSIMISAYCRGRLL 408

Query: 921 EKAEEIFREMKSVGLVPNKVVLTTLL 998
           E+A+++ +E ++     + V+L T+L
Sbjct: 409 EEAKQLAKEFEAKYDKYDVVILNTML 434


>ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|222846925|gb|EEE84472.1|
            predicted protein [Populus trichocarpa]
          Length = 562

 Score =  299 bits (766), Expect = 6e-79
 Identities = 138/222 (62%), Positives = 183/222 (82%)
 Frame = +3

Query: 336  VLKGQDFNVVMRHLGKQNRLKDLSQLFEWMLQNGKLNFASYSSYVKLMGKSLHPNKALEI 515
            +LK QD N+++R+ G+Q R +DLSQLF+WM ++ K++ +SYSSY+K MG SL+P KALEI
Sbjct: 1    MLKVQDLNIILRNFGEQCRWQDLSQLFDWMQRHNKISASSYSSYIKFMGTSLNPAKALEI 60

Query: 516  YSGIEDKLTRVNPSVCNSVLGCLTKSGKLESSLELFRRMKQDGLVPDVVTYSTLLAGCAK 695
            Y  I D+ T+ N  +CNS+L CL ++ K +SS++ F +MK +GL PD +TYSTLLAGC K
Sbjct: 61   YHSIPDESTKTNVFICNSLLRCLVRNTKFDSSMKFFHKMKNNGLTPDAITYSTLLAGCMK 120

Query: 696  VQDGYKKAMELVQELQKKGLQMDSVIYGSLISVCASCNQCKEAEGYFNQMKIEGHIPNVF 875
            ++DGY KA++LVQEL   GLQMDS++YG+L++VCAS N+C+EA+ YFNQMK EGH PN+F
Sbjct: 121  IKDGYSKALDLVQELNYNGLQMDSIMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPNIF 180

Query: 876  HYSSLLNAYSVDGNYEKAEEIFREMKSVGLVPNKVVLTTLLK 1001
            HYSSLLNAYS DGNY+KAEE+ ++MKS GLVPNKV+LTTLLK
Sbjct: 181  HYSSLLNAYSSDGNYKKAEELVQDMKSSGLVPNKVILTTLLK 222


>ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like [Cucumis sativus]
          Length = 668

 Score =  298 bits (762), Expect = 2e-78
 Identities = 142/268 (52%), Positives = 198/268 (73%)
 Frame = +3

Query: 198  SHDGASVNSSPKSKEYTSISRQARRLSILDIQQSPDLQLALSRSGSVLKGQDFNVVMRHL 377
            S +   +N + K    + + RQ+   +I  ++   +L  AL+R G +LK QD NV++RH 
Sbjct: 57   SSNAKLINGAQKRHSKSYLERQS---AIAQVKDCSELAPALARYGGLLKAQDLNVILRHF 113

Query: 378  GKQNRLKDLSQLFEWMLQNGKLNFASYSSYVKLMGKSLHPNKALEIYSGIEDKLTRVNPS 557
            G  +R KDLSQLFEWM + GK N +SYSSY+K MG+ L+P KALE+Y+ IE+   + +  
Sbjct: 114  GMLSRWKDLSQLFEWMQETGKTNVSSYSSYIKFMGRGLNPLKALEVYNNIEEVSIKNSIF 173

Query: 558  VCNSVLGCLTKSGKLESSLELFRRMKQDGLVPDVVTYSTLLAGCAKVQDGYKKAMELVQE 737
            +CNS+L CL ++GK ++S++LF +MK DGL PD VTYST+L GC +V+ GY KAMEL++E
Sbjct: 174  ICNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGCIRVKHGYAKAMELLKE 233

Query: 738  LQKKGLQMDSVIYGSLISVCASCNQCKEAEGYFNQMKIEGHIPNVFHYSSLLNAYSVDGN 917
            LQ  GL MD V YG+LI++CAS N+ ++AE +FNQM+ EGH PN+FHY SLLNAYS++G+
Sbjct: 234  LQDNGLCMDCVSYGTLIAICASHNRLEDAERFFNQMRAEGHSPNMFHYGSLLNAYSINGD 293

Query: 918  YEKAEEIFREMKSVGLVPNKVVLTTLLK 1001
            Y+KA+E+  +MK  GLVPNKV+LTTLLK
Sbjct: 294  YKKADELIEDMKLTGLVPNKVILTTLLK 321


>gb|AAB65486.1| membrane-associated salt-inducible protein isolog; 88078-84012
            [Arabidopsis thaliana]
          Length = 652

 Score =  293 bits (750), Expect = 4e-77
 Identities = 142/264 (53%), Positives = 204/264 (77%)
 Frame = +3

Query: 210  ASVNSSPKSKEYTSISRQARRLSILDIQQSPDLQLALSRSGSVLKGQDFNVVMRHLGKQN 389
            A+V  +P+SK +++ S  AR+ +I ++Q+S D   +L R  +VLK QD NV++R  G   
Sbjct: 54   ANVAEAPRSKRHSN-SYLARKSAISEVQRSSDFLSSLQRLATVLKVQDLNVILRDFGISG 112

Query: 390  RLKDLSQLFEWMLQNGKLNFASYSSYVKLMGKSLHPNKALEIYSGIEDKLTRVNPSVCNS 569
            R +DL QLFEWM Q+GK++ ++YSS +K +G   + +KALEIY  I D+ T++N  +CNS
Sbjct: 113  RWQDLIQLFEWMQQHGKISVSTYSSCIKFVGAK-NVSKALEIYQSIPDESTKINVYICNS 171

Query: 570  VLGCLTKSGKLESSLELFRRMKQDGLVPDVVTYSTLLAGCAKVQDGYKKAMELVQELQKK 749
            +L CL K+GKL+S ++LF +MK+DGL PDVVTY+TLLAGC KV++GY KA+EL+ EL   
Sbjct: 172  ILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHN 231

Query: 750  GLQMDSVIYGSLISVCASCNQCKEAEGYFNQMKIEGHIPNVFHYSSLLNAYSVDGNYEKA 929
            G+QMDSV+YG+++++CAS  + +EAE +  QMK+EGH PN++HYSSLLN+YS  G+Y+KA
Sbjct: 232  GIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKA 291

Query: 930  EEIFREMKSVGLVPNKVVLTTLLK 1001
            +E+  EMKS+GLVPNKV++TTLLK
Sbjct: 292  DELMTEMKSIGLVPNKVMMTTLLK 315


Top