BLASTX nr result

ID: Atractylodes22_contig00016593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016593
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vini...   296   2e-78
ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucum...   276   2e-72
ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, put...   275   6e-72
ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arab...   245   5e-63
ref|NP_174061.1| DNA repair metallo-beta-lactamase family protei...   244   1e-62

>ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vinifera]
           gi|296081253|emb|CBI17997.3| unnamed protein product
           [Vitis vinifera]
          Length = 435

 Score =  296 bits (758), Expect = 2e-78
 Identities = 142/197 (72%), Positives = 166/197 (84%)
 Frame = +1

Query: 67  MERGMISVDRWAAGSQVYFLTHLHADHTAGLSSSWKKGPLYCSRITAKLFPPKFPGFDLS 246
           ME+G+ISVDRW+  SQVYFLTHLH+DHT  LSSSW KGPL+CSR+TAKLFP KFP F+LS
Sbjct: 1   MEKGLISVDRWSDHSQVYFLTHLHSDHTQCLSSSWTKGPLFCSRLTAKLFPFKFPNFNLS 60

Query: 247 LLRILEIGQWCXXXXXXXXXXXETRVEVIAIDANHCPGAVMYLFRGEFGSMLYTGDFRWE 426
           LLRILEIG W            ET V+V+AIDA+HCPGAVMYLFRG+FG ML+TGDFRWE
Sbjct: 61  LLRILEIGSWHSVSLVSPSSGSETTVDVMAIDAHHCPGAVMYLFRGDFGCMLFTGDFRWE 120

Query: 427 VTSKVAQIGKNMLLSALKNDKVNTLYIDNTYCNPSYSFPSREVAAQQVVNIINFYPEHDI 606
            T++ A+IG+ MLL AL+ D+VN LY+DNTYCNPS+SFPSRE AAQQVV+II  +P+HDI
Sbjct: 121 ATNERAKIGRTMLLHALEGDRVNILYLDNTYCNPSFSFPSREAAAQQVVDIIASHPKHDI 180

Query: 607 IIGIDSLGKEDLLLYIS 657
           IIGID+LGKEDLLLYIS
Sbjct: 181 IIGIDTLGKEDLLLYIS 197


>ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
           gi|449493187|ref|XP_004159216.1| PREDICTED: 5'
           exonuclease Apollo-like [Cucumis sativus]
          Length = 428

 Score =  276 bits (707), Expect = 2e-72
 Identities = 127/197 (64%), Positives = 162/197 (82%)
 Frame = +1

Query: 67  MERGMISVDRWAAGSQVYFLTHLHADHTAGLSSSWKKGPLYCSRITAKLFPPKFPGFDLS 246
           ME G+ISVDRW+ GSQ+YFLTHLH+DHT GLSS W KGPL+CSR+TAK FP KFP F+LS
Sbjct: 1   MENGLISVDRWSEGSQIYFLTHLHSDHTKGLSSQWSKGPLFCSRLTAKFFPLKFPSFNLS 60

Query: 247 LLRILEIGQWCXXXXXXXXXXXETRVEVIAIDANHCPGAVMYLFRGEFGSMLYTGDFRWE 426
           LLR+LEIG W               ++V+AIDA+HCPGAVM LFRG+FG +LYTGDFRWE
Sbjct: 61  LLRVLEIGLWHSISLVSPSSGSRKVIKVVAIDAHHCPGAVMLLFRGDFGCLLYTGDFRWE 120

Query: 427 VTSKVAQIGKNMLLSALKNDKVNTLYIDNTYCNPSYSFPSREVAAQQVVNIINFYPEHDI 606
           ++S+ A  G+  LL+AL+++ V+ LY+DNTYCNPSY+FPSRE+AA+Q+V+II  +P+HDI
Sbjct: 121 MSSERANKGRIALLNALEDNTVDVLYLDNTYCNPSYAFPSREIAARQIVDIIASHPQHDI 180

Query: 607 IIGIDSLGKEDLLLYIS 657
           IIG++SLGKEDLL++IS
Sbjct: 181 IIGVNSLGKEDLLVHIS 197


>ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223538070|gb|EEF39682.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 427

 Score =  275 bits (703), Expect = 6e-72
 Identities = 128/197 (64%), Positives = 160/197 (81%)
 Frame = +1

Query: 67  MERGMISVDRWAAGSQVYFLTHLHADHTAGLSSSWKKGPLYCSRITAKLFPPKFPGFDLS 246
           ME+G++SVD+W  GSQVYFLTHLH+DHT GL+S+W +GPL+CSR+TA LFP +FP F+LS
Sbjct: 1   MEKGLVSVDQWKEGSQVYFLTHLHSDHTKGLTSAWARGPLFCSRLTANLFPARFPEFNLS 60

Query: 247 LLRILEIGQWCXXXXXXXXXXXETRVEVIAIDANHCPGAVMYLFRGEFGSMLYTGDFRWE 426
           LL +L+IG W            +T ++V+ IDA+HCPGAVM LFRG+FG +LYTGDFRWE
Sbjct: 61  LLCVLDIGVWHSLSVVSPSSGSQTVLQVMPIDAHHCPGAVMLLFRGDFGCLLYTGDFRWE 120

Query: 427 VTSKVAQIGKNMLLSALKNDKVNTLYIDNTYCNPSYSFPSREVAAQQVVNIINFYPEHDI 606
            TS+  +IG NMLL+ALK+D V+ LY+DNTYCNPS+ FP R VAA+QVV+II  +P HDI
Sbjct: 121 ATSERGKIGSNMLLNALKDDSVDILYLDNTYCNPSFDFPPRHVAARQVVDIIASHPGHDI 180

Query: 607 IIGIDSLGKEDLLLYIS 657
           IIGIDSLGKEDLLL+IS
Sbjct: 181 IIGIDSLGKEDLLLHIS 197


>ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arabidopsis lyrata subsp.
           lyrata] gi|297336568|gb|EFH66985.1| hypothetical protein
           ARALYDRAFT_472944 [Arabidopsis lyrata subsp. lyrata]
          Length = 422

 Score =  245 bits (626), Expect = 5e-63
 Identities = 114/197 (57%), Positives = 144/197 (73%)
 Frame = +1

Query: 67  MERGMISVDRWAAGSQVYFLTHLHADHTAGLSSSWKKGPLYCSRITAKLFPPKFPGFDLS 246
           ME G+ISVDRW  GSQ YFLTH+ +DHT GLS  W KGPLYCSRITA LFP +FPGFDLS
Sbjct: 1   MESGLISVDRWRKGSQAYFLTHMQSDHTRGLSGGWSKGPLYCSRITASLFPSRFPGFDLS 60

Query: 247 LLRILEIGQWCXXXXXXXXXXXETRVEVIAIDANHCPGAVMYLFRGEFGSMLYTGDFRWE 426
           LLR++ +  W              R+  +AIDA+HCPG++M+LFRG+FG  LYTGDFRW+
Sbjct: 61  LLRVVPLYSWTSLSLRSPSSGSTVRLHFMAIDAHHCPGSMMFLFRGDFGCFLYTGDFRWD 120

Query: 427 VTSKVAQIGKNMLLSALKNDKVNTLYIDNTYCNPSYSFPSREVAAQQVVNIINFYPEHDI 606
             +  +   + +L+ A+    V+ LY+DNTYCNP YSFPSR+VAAQ V +II  +P HDI
Sbjct: 121 --ADASDEARTILVDAIHEFPVDILYLDNTYCNPIYSFPSRQVAAQLVADIIASHPSHDI 178

Query: 607 IIGIDSLGKEDLLLYIS 657
           II +DSLGKE+LLL++S
Sbjct: 179 IIAVDSLGKEELLLHVS 195


>ref|NP_174061.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis
           thaliana] gi|9802533|gb|AAF99735.1|AC004557_14 F17L21.20
           [Arabidopsis thaliana] gi|17473671|gb|AAL38292.1|
           unknown protein [Arabidopsis thaliana]
           gi|20148601|gb|AAM10191.1| unknown protein [Arabidopsis
           thaliana] gi|332192705|gb|AEE30826.1| DNA repair
           metallo-beta-lactamase family protein [Arabidopsis
           thaliana]
          Length = 422

 Score =  244 bits (622), Expect = 1e-62
 Identities = 113/197 (57%), Positives = 143/197 (72%)
 Frame = +1

Query: 67  MERGMISVDRWAAGSQVYFLTHLHADHTAGLSSSWKKGPLYCSRITAKLFPPKFPGFDLS 246
           ME G+ISVDRW  GSQ YFLTH+H+DHT GLS  W +GPLYCSR TA LFP +FPGFDLS
Sbjct: 1   MESGLISVDRWRNGSQAYFLTHIHSDHTRGLSGGWSQGPLYCSRTTASLFPSRFPGFDLS 60

Query: 247 LLRILEIGQWCXXXXXXXXXXXETRVEVIAIDANHCPGAVMYLFRGEFGSMLYTGDFRWE 426
           LLR++ +  W              R+ ++AIDA+HCPG++M+LFRG+FG  LYTGDFRW+
Sbjct: 61  LLRVVPLFSWTSLSLRSPSSGSTVRLHLMAIDAHHCPGSIMFLFRGDFGCFLYTGDFRWD 120

Query: 427 VTSKVAQIGKNMLLSALKNDKVNTLYIDNTYCNPSYSFPSREVAAQQVVNIINFYPEHDI 606
             S  +   +  L++A+    V+ LY+DNTYCNP YSFPSR VA Q V +II  +P HDI
Sbjct: 121 --SDASDEARTTLVAAIDEFPVDILYLDNTYCNPIYSFPSRLVAVQLVADIIASHPSHDI 178

Query: 607 IIGIDSLGKEDLLLYIS 657
           II +DSLGKEDLL+++S
Sbjct: 179 IIAVDSLGKEDLLVHVS 195


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