BLASTX nr result

ID: Atractylodes22_contig00016573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016573
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleop...   248   2e-63
ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleop...   241   2e-61
gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo]        238   2e-60
ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|2...   233   5e-59
ref|XP_004166896.1| PREDICTED: U11/U12 small nuclear ribonucleop...   225   2e-56

>ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
           [Vitis vinifera] gi|302141700|emb|CBI18903.3| unnamed
           protein product [Vitis vinifera]
          Length = 176

 Score =  248 bits (632), Expect = 2e-63
 Identities = 117/175 (66%), Positives = 146/175 (83%)
 Frame = +1

Query: 247 EPTSSAVKEDDNVALEYNSNNVKKAKLNSTXXXXXXXXXXXXXXKKPTLSDVDTLISLEL 426
           E +    +E+++V   YNSNNVKKA+L+ST              K+PTLSDVDTLI+LEL
Sbjct: 2   ESSGGGKREEEDVG-SYNSNNVKKARLHSTLTALLDDPILADVPKEPTLSDVDTLINLEL 60

Query: 427 GSAMRVSVLKLDRTSFDVAVMNSATLKDLKLAVQKKINEMEQSKMGHRHISWKHVWRNFC 606
           GSAMR+SV+KLD TSFDVAV+NSAT+KDLKLA++KKIN+MEQSKMGHRHISWKHVW NFC
Sbjct: 61  GSAMRISVIKLDSTSFDVAVLNSATVKDLKLAIKKKINDMEQSKMGHRHISWKHVWANFC 120

Query: 607 LSYHNEKLLNDEAILQDHGVRNHSQVHFIPYVMSRASKQHSRRRKHRFFHGLNRR 771
           LSY+N+KL+ND + LQD G+ N+SQVHF+P++MS+ S++HSRRRKHRFFHGLN+R
Sbjct: 121 LSYYNDKLINDGSALQDFGIHNNSQVHFVPFIMSKGSQRHSRRRKHRFFHGLNKR 175


>ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
           protein-like [Cucumis sativus]
          Length = 181

 Score =  241 bits (616), Expect = 2e-61
 Identities = 117/170 (68%), Positives = 141/170 (82%)
 Frame = +1

Query: 259 SAVKEDDNVALEYNSNNVKKAKLNSTXXXXXXXXXXXXXXKKPTLSDVDTLISLELGSAM 438
           S +K+++N A+ Y+SNNVKK +LNST              K PTLS VDTLISLELGSAM
Sbjct: 11  SIIKDEEN-AVGYHSNNVKKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAM 69

Query: 439 RVSVLKLDRTSFDVAVMNSATLKDLKLAVQKKINEMEQSKMGHRHISWKHVWRNFCLSYH 618
           R+SVLKLD T+ DV +MNSATLKDLKLA++KK+NEMEQSKMGHRHISWKHVW NFCL++ 
Sbjct: 70  RISVLKLDGTAIDVVIMNSATLKDLKLAIKKKVNEMEQSKMGHRHISWKHVWANFCLAHL 129

Query: 619 NEKLLNDEAILQDHGVRNHSQVHFIPYVMSRASKQHSRRRKHRFFHGLNR 768
           NEKLL+D ++LQD G+RN+SQV FIPYVMS++S+ HSRRRKHRFFHGLN+
Sbjct: 130 NEKLLDDSSVLQDFGIRNNSQVRFIPYVMSKSSRTHSRRRKHRFFHGLNK 179


>gb|ADN34128.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 181

 Score =  238 bits (606), Expect = 2e-60
 Identities = 115/170 (67%), Positives = 139/170 (81%)
 Frame = +1

Query: 259 SAVKEDDNVALEYNSNNVKKAKLNSTXXXXXXXXXXXXXXKKPTLSDVDTLISLELGSAM 438
           S  K+++NV + Y+SNNVKK +LNST              K PTLS VDTLISLELGSAM
Sbjct: 11  SMSKDEENV-VGYHSNNVKKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAM 69

Query: 439 RVSVLKLDRTSFDVAVMNSATLKDLKLAVQKKINEMEQSKMGHRHISWKHVWRNFCLSYH 618
           R+SVLKLD T+ DV +MNSATLKDLKLA+++K+NE EQSKMGHRHISWKHVW NFCL++H
Sbjct: 70  RISVLKLDGTAIDVLIMNSATLKDLKLAIKQKVNETEQSKMGHRHISWKHVWANFCLAHH 129

Query: 619 NEKLLNDEAILQDHGVRNHSQVHFIPYVMSRASKQHSRRRKHRFFHGLNR 768
           NEK+L+D ++LQD G+RN+SQV FIPYVMS+ S+ HSRRRKHRFFHGLN+
Sbjct: 130 NEKILDDSSVLQDFGIRNNSQVRFIPYVMSKNSRTHSRRRKHRFFHGLNK 179


>ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|222843666|gb|EEE81213.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  233 bits (595), Expect = 5e-59
 Identities = 117/171 (68%), Positives = 138/171 (80%)
 Frame = +1

Query: 259 SAVKEDDNVALEYNSNNVKKAKLNSTXXXXXXXXXXXXXXKKPTLSDVDTLISLELGSAM 438
           S+ K +D V   YNS+NVKKAKL ST              KKPTLSDVDTLISLE+GSAM
Sbjct: 3   SSSKGEDEVG-GYNSSNVKKAKLQSTLAALLDDPILSDVPKKPTLSDVDTLISLEMGSAM 61

Query: 439 RVSVLKLDRTSFDVAVMNSATLKDLKLAVQKKINEMEQSKMGHRHISWKHVWRNFCLSYH 618
           R+SV KLD TSFDVA+MNSAT+KDLKLA+++K+ EMEQSKMGHRHISWK VW NF LSYH
Sbjct: 62  RISVQKLDGTSFDVALMNSATVKDLKLAIKRKLIEMEQSKMGHRHISWKKVWANFALSYH 121

Query: 619 NEKLLNDEAILQDHGVRNHSQVHFIPYVMSRASKQHSRRRKHRFFHGLNRR 771
           N+KLL+D + LQD G+RN+SQVHF  YVMS+ S++HS+RRKHRFFHGLN+R
Sbjct: 122 NQKLLDDNSALQDSGIRNNSQVHFASYVMSKDSQRHSKRRKHRFFHGLNKR 172


>ref|XP_004166896.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
           protein-like [Cucumis sativus]
          Length = 209

 Score =  225 bits (573), Expect = 2e-56
 Identities = 107/152 (70%), Positives = 126/152 (82%)
 Frame = +1

Query: 313 KKAKLNSTXXXXXXXXXXXXXXKKPTLSDVDTLISLELGSAMRVSVLKLDRTSFDVAVMN 492
           KK +LNST              K PTLS VDTLISLELGSAMR+SVLKLD T+ DV +MN
Sbjct: 56  KKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMRISVLKLDGTAIDVVIMN 115

Query: 493 SATLKDLKLAVQKKINEMEQSKMGHRHISWKHVWRNFCLSYHNEKLLNDEAILQDHGVRN 672
           SATLKDLKLA++KK+NEMEQSKMGHRHISWKHVW NFCL++ NEKLL+D ++LQD G+RN
Sbjct: 116 SATLKDLKLAIKKKVNEMEQSKMGHRHISWKHVWANFCLAHLNEKLLDDSSVLQDFGIRN 175

Query: 673 HSQVHFIPYVMSRASKQHSRRRKHRFFHGLNR 768
           +SQ+ FIPYVMS++S+ HSRRRKHRFFHGLN+
Sbjct: 176 NSQIRFIPYVMSKSSRTHSRRRKHRFFHGLNK 207


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