BLASTX nr result

ID: Atractylodes22_contig00016563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016563
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like...   204   8e-51
ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like...   186   2e-45
ref|XP_002525826.1| Splicing factor 3B subunit, putative [Ricinu...   174   1e-41
ref|XP_002323970.1| predicted protein [Populus trichocarpa] gi|2...   169   4e-40
gb|AFW66534.1| hypothetical protein ZEAMMB73_641784 [Zea mays] g...   157   1e-36

>ref|XP_002284022.1| PREDICTED: splicing factor 3B subunit 1-like [Vitis vinifera]
          Length = 1271

 Score =  204 bits (520), Expect = 8e-51
 Identities = 110/205 (53%), Positives = 127/205 (61%), Gaps = 3/205 (1%)
 Frame = +3

Query: 3   KIMEAALAP-NSITFDTELYDGNNRFQDYNREIPXXXXXXXXXXXXXXVARKLASYTAPR 179
           K ME  L+   S+ +D ELY G N+F+DY   IP              + R+L SYTAP 
Sbjct: 16  KKMEQQLSSLTSVNYDPELYGGTNKFEDYVSSIPVNDEEENVDAMDPGLGRRLPSYTAPA 75

Query: 180 SLLNDMPRGG-DDESLGFKKSQXXXXXXXXXXXXXLNQVISPERHDAFANGDKTPKPETR 356
           SLL +MPRGG +++ +GFKK Q             LN+VISP+RHDAFA+GDKTP    R
Sbjct: 76  SLLKEMPRGGVEEDDMGFKKPQRIIDREDDYRRRRLNRVISPDRHDAFASGDKTPDVSVR 135

Query: 357 TYADVMREAALKREKEETLKVIXXXXXXXXXXXXXXXXXXTAAA-QPAQKRRNRWDQSQD 533
           TYADVMRE ALKREKEETLK I                    A  QP QKRRNRWDQSQD
Sbjct: 136 TYADVMREEALKREKEETLKAIAKKKKEEEEAKEQEKETGGGAVQQPTQKRRNRWDQSQD 195

Query: 534 ESGAKKAKTGSDWDMPDSTPGIGRW 608
           +  AKKAKTGSDWD+PDSTPGIGRW
Sbjct: 196 DGSAKKAKTGSDWDLPDSTPGIGRW 220


>ref|XP_004137159.1| PREDICTED: splicing factor 3B subunit 1-like [Cucumis sativus]
           gi|449523197|ref|XP_004168610.1| PREDICTED: splicing
           factor 3B subunit 1-like [Cucumis sativus]
          Length = 1262

 Score =  186 bits (473), Expect = 2e-45
 Identities = 110/204 (53%), Positives = 126/204 (61%), Gaps = 4/204 (1%)
 Frame = +3

Query: 9   MEAALAP-NSITFDTELYDGNNRFQDYNREIPXXXXXXXXXXXXXXVARKLASYTAPRSL 185
           ME  LA  NS+TFDT+LY GN++   Y   IP              V RKLASYTAP+SL
Sbjct: 15  MEQQLASLNSVTFDTDLYGGNDK-AGYVTSIPVNEDDENLESQVNVVGRKLASYTAPKSL 73

Query: 186 LNDMPRGGD-DESLGFKKSQXXXXXXXXXXXXXLNQVISPERHDAFANGDKTPKPETRTY 362
           L +MPRG D DE LG+KK Q             LN+VISPERHDAFA G+KTP P  RTY
Sbjct: 74  LKEMPRGVDEDEDLGYKKPQRIIDREDDYRKRRLNRVISPERHDAFAAGEKTPDPSVRTY 133

Query: 363 ADVMREAALKREKEETLKVI--XXXXXXXXXXXXXXXXXXTAAAQPAQKRRNRWDQSQDE 536
           A+VMRE ALKRE+EETL+ I                     A+A   QKRRNRWDQSQD+
Sbjct: 134 AEVMREEALKREREETLRAIAKKKEEEEAAKASGEKPKEPLASAAAPQKRRNRWDQSQDD 193

Query: 537 SGAKKAKTGSDWDMPDSTPGIGRW 608
            GAKKAKT SDWD+PD+TP  GRW
Sbjct: 194 GGAKKAKT-SDWDLPDTTP--GRW 214


>ref|XP_002525826.1| Splicing factor 3B subunit, putative [Ricinus communis]
           gi|223534831|gb|EEF36520.1| Splicing factor 3B subunit,
           putative [Ricinus communis]
          Length = 1233

 Score =  174 bits (441), Expect = 1e-41
 Identities = 104/213 (48%), Positives = 123/213 (57%), Gaps = 13/213 (6%)
 Frame = +3

Query: 9   MEAALAP-NSITFDTELYDGNNRFQDYNREIPXXXXXXXXXXXXXXVARKLASYTAPRSL 185
           ME  LA   S+TFD +LY G +R   Y   IP              VARKLASYTAP+SL
Sbjct: 15  MEQELASLTSLTFDKDLYGGTDR-DSYVTSIPVNDDDDLDIGDNE-VARKLASYTAPKSL 72

Query: 186 LNDMPRGGDDES-LGFKKSQXXXXXXXXXXXXXLNQVISPERHDAFANGDKTPKPETRTY 362
           L +MPRGGDD++  GFKK               LN+ +SP+RHDAFA G+KTP P  R+Y
Sbjct: 73  LKEMPRGGDDDNDSGFKKPSRIIDREDDYRRRRLNRGLSPDRHDAFAAGEKTPDPSVRSY 132

Query: 363 ADVMREAALKREKEETLKVIXXXXXXXXXXXXXXXXXXTAA----------AQPAQKRRN 512
           A+VM+E ALKREKEETL++I                    A               KRRN
Sbjct: 133 AEVMKEEALKREKEETLRLIAKKKKEEEEAAKEGKVSNGVAGVKEKEVKESGAVVSKRRN 192

Query: 513 RWDQSQDESG-AKKAKTGSDWDMPDSTPGIGRW 608
           RWDQSQDE G AKK K+GSDWD+PD+TPGIGRW
Sbjct: 193 RWDQSQDEGGAAKKVKSGSDWDLPDATPGIGRW 225


>ref|XP_002323970.1| predicted protein [Populus trichocarpa] gi|222866972|gb|EEF04103.1|
           predicted protein [Populus trichocarpa]
          Length = 1267

 Score =  169 bits (428), Expect = 4e-40
 Identities = 97/207 (46%), Positives = 121/207 (58%), Gaps = 5/207 (2%)
 Frame = +3

Query: 3   KIMEAALAP-NSITFDTELYDGNNRFQDYNREIPXXXXXXXXXXXXXXVARKLASYTAPR 179
           K ME  LA   S+TFD +LY G +R   Y   IP              VA+KLASYTAP+
Sbjct: 13  KKMEQQLASLTSLTFDRDLYGGVDR-NAYETSIPATDDEEPEVGLNE-VAQKLASYTAPK 70

Query: 180 SLLNDMPRGGDD--ESLGFKKSQXXXXXXXXXXXXXLNQVISPERHDAFANGDKTPKPET 353
           S+L +MPRGGDD  E  GF+K               L+++ISPERHD F+ G+KTP P  
Sbjct: 71  SVLKEMPRGGDDSEEVNGFRKPSRIIDREDDYRRRRLDRIISPERHDPFSAGEKTPDPSV 130

Query: 354 RTYADVMREAALKREKEETLKVIXXXXXXXXXXXXXXXXXXTAAAQPAQKRRNRWDQSQD 533
           RTY+D+M+E +LKR+KEE L+ I                     +    KRRNRWDQS +
Sbjct: 131 RTYSDIMKEESLKRQKEELLREIAKKKKEEEEARAEKGDKGEKESNSMAKRRNRWDQSME 190

Query: 534 ESG--AKKAKTGSDWDMPDSTPGIGRW 608
           + G  AKKAKTGSDWD+PD+TPGIGRW
Sbjct: 191 DGGNAAKKAKTGSDWDLPDATPGIGRW 217


>gb|AFW66534.1| hypothetical protein ZEAMMB73_641784 [Zea mays]
           gi|413926603|gb|AFW66535.1| hypothetical protein
           ZEAMMB73_641784 [Zea mays]
          Length = 1280

 Score =  157 bits (398), Expect = 1e-36
 Identities = 91/207 (43%), Positives = 111/207 (53%), Gaps = 9/207 (4%)
 Frame = +3

Query: 15  AALAPNSITFDTELYDGN----NRFQDYNREIPXXXXXXXXXXXXXX--VARKLASYTAP 176
           A +A +S+TFDT+LY G     NRF  Y+  IP                  R+LA+YT  
Sbjct: 26  APMAVSSVTFDTDLYGGGGADPNRFAGYDTSIPASEDDAAEDDTELANPAPRRLAAYTGH 85

Query: 177 RSLLNDMPRGGDDESLGFKKSQXXXXXXXXXXXXXLNQVISPERHDAFANGDKTPKPETR 356
                D+PR  DD+    K+SQ             LNQ+ISPERHD FA G+ TP P  R
Sbjct: 86  AIAAADLPRSADDDDGLPKRSQRIIDREDDYRRRRLNQIISPERHDPFAAGEATPDPSVR 145

Query: 357 TYADVMREAALKREKEETLKVIXXXXXXXXXXXXXXXXXXTAAAQPAQKRRNRWDQSQD- 533
           TYADVMR+AAL+++KE+ L+ I                        A KRRNRWDQSQD 
Sbjct: 146 TYADVMRDAALQKKKEDLLREIAKKKKEEEEKEKERKAAAPEQPAAATKRRNRWDQSQDG 205

Query: 534 --ESGAKKAKTGSDWDMPDSTPGIGRW 608
              +G KKAKT SDWD PD+TPGIGRW
Sbjct: 206 DAAAGGKKAKTSSDWDAPDATPGIGRW 232


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