BLASTX nr result

ID: Atractylodes22_contig00016556 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016556
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18266.3| unnamed protein product [Vitis vinifera]              212   2e-53
gb|AFL55357.1| Fanconia anemia complementation group M-like prot...   211   4e-53
ref|NP_001185141.1| fanconi anemia group M protein [Arabidopsis ...   204   5e-51
ref|XP_003530407.1| PREDICTED: ATP-dependent DNA helicase MPH1-l...   194   5e-48
ref|XP_001753469.1| predicted protein [Physcomitrella patens sub...   177   1e-42

>emb|CBI18266.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score =  212 bits (540), Expect = 2e-53
 Identities = 103/129 (79%), Positives = 116/129 (89%), Gaps = 9/129 (6%)
 Frame = -3

Query: 365 SKGQSQKVQQTVLQKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGR 186
           SKGQSQKVQQ VL+KFRAGGFNVIVATSIGEEGLDIMEVDLVICFDAN+SPLRMIQRMGR
Sbjct: 568 SKGQSQKVQQAVLEKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANISPLRMIQRMGR 627

Query: 185 TGRKNEGRV---------VVLACEGSELKGYLRKQASSKAIKKHMLNGGMNSFRFHSSPR 33
           TGRK++GRV         +VLACEGSE+KGY+RKQA+SK ++KHM NGGMNSF FHSSPR
Sbjct: 628 TGRKHDGRVDILLSFMLLLVLACEGSEMKGYMRKQANSKTVRKHMRNGGMNSFNFHSSPR 687

Query: 32  MVPHVFRPE 6
           M+PH+F+PE
Sbjct: 688 MIPHIFKPE 696


>gb|AFL55357.1| Fanconia anemia complementation group M-like protein [Arabidopsis
           thaliana]
          Length = 1344

 Score =  211 bits (538), Expect = 4e-53
 Identities = 102/119 (85%), Positives = 109/119 (91%)
 Frame = -3

Query: 362 KGQSQKVQQTVLQKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRT 183
           KGQSQK+QQ VL+KFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRT
Sbjct: 511 KGQSQKIQQAVLEKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRT 570

Query: 182 GRKNEGRVVVLACEGSELKGYLRKQASSKAIKKHMLNGGMNSFRFHSSPRMVPHVFRPE 6
           GRKN GRVVVLACEGSE   Y+RKQAS +AIKKHM NGG NSF FH SPRM+PHV++PE
Sbjct: 571 GRKNNGRVVVLACEGSEKNSYMRKQASGRAIKKHMRNGGTNSFNFHPSPRMIPHVYKPE 629


>ref|NP_001185141.1| fanconi anemia group M protein [Arabidopsis thaliana]
           gi|332193686|gb|AEE31807.1| fanconi anemia group M
           protein [Arabidopsis thaliana]
          Length = 1390

 Score =  204 bits (520), Expect = 5e-51
 Identities = 100/120 (83%), Positives = 109/120 (90%), Gaps = 1/120 (0%)
 Frame = -3

Query: 362 KGQSQKVQQTVLQKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRT 183
           KGQSQK+QQ VL+KFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRT
Sbjct: 509 KGQSQKIQQAVLEKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRT 568

Query: 182 GRKNEGR-VVVLACEGSELKGYLRKQASSKAIKKHMLNGGMNSFRFHSSPRMVPHVFRPE 6
           GRKN GR ++VLACEGSE   Y+RKQAS +AIKKHM NGG NSF FH SPRM+PHV++PE
Sbjct: 569 GRKNNGRPLLVLACEGSEKNSYMRKQASGRAIKKHMRNGGTNSFNFHPSPRMIPHVYKPE 628


>ref|XP_003530407.1| PREDICTED: ATP-dependent DNA helicase MPH1-like [Glycine max]
          Length = 1262

 Score =  194 bits (494), Expect = 5e-48
 Identities = 95/120 (79%), Positives = 108/120 (90%), Gaps = 1/120 (0%)
 Frame = -3

Query: 362 KGQSQKVQQTVLQKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGRT 183
           KGQSQKVQQ VL+KFR+G +NVIVATSIGEEGLDIMEVDLVI FDAN+SPLRMIQRMGRT
Sbjct: 493 KGQSQKVQQAVLKKFRSGAYNVIVATSIGEEGLDIMEVDLVISFDANISPLRMIQRMGRT 552

Query: 182 GRKNEGR-VVVLACEGSELKGYLRKQASSKAIKKHMLNGGMNSFRFHSSPRMVPHVFRPE 6
           GRK++GR ++V ACEG+ELKGYL+KQA SK I KHM NGG+NSF FH SPRM+PHV +PE
Sbjct: 553 GRKHDGRSLLVFACEGTELKGYLQKQAKSKTISKHMRNGGINSFTFHPSPRMIPHVLKPE 612


>ref|XP_001753469.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162695348|gb|EDQ81692.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 624

 Score =  177 bits (448), Expect = 1e-42
 Identities = 89/121 (73%), Positives = 103/121 (85%), Gaps = 8/121 (6%)
 Frame = -3

Query: 365 SKGQSQKVQQTVLQKFRAGGFNVIVATSIGEEGLDIMEVDLVICFDANVSPLRMIQRMGR 186
           SKGQ+QK+QQ VLQKFR+GGFN IVATSI EEGLDIMEVDLVICFDAN+SPLRMIQRMGR
Sbjct: 471 SKGQTQKMQQAVLQKFRSGGFNTIVATSIAEEGLDIMEVDLVICFDANISPLRMIQRMGR 530

Query: 185 TGRKNEGRV--------VVLACEGSELKGYLRKQASSKAIKKHMLNGGMNSFRFHSSPRM 30
           TGRK +GRV        +VLA EG+E++GYL+KQA +KA+ KHM +GG+NSF FH SPRM
Sbjct: 531 TGRKRDGRVDILINTYSLVLASEGAEVQGYLKKQAKNKALGKHMQHGGVNSFSFHPSPRM 590

Query: 29  V 27
           V
Sbjct: 591 V 591


Top