BLASTX nr result

ID: Atractylodes22_contig00016448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016448
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525759.1| meiotic recombination repair protein, putati...   190   1e-46
ref|NP_200237.1| double-strand break repair protein MRE11 [Arabi...   187   6e-46
ref|XP_004154884.1| PREDICTED: double-strand break repair protei...   187   8e-46
ref|XP_004146869.1| PREDICTED: LOW QUALITY PROTEIN: double-stran...   187   8e-46
ref|XP_002864322.1| hypothetical protein ARALYDRAFT_495511 [Arab...   187   1e-45

>ref|XP_002525759.1| meiotic recombination repair protein, putative [Ricinus communis]
           gi|223534909|gb|EEF36595.1| meiotic recombination repair
           protein, putative [Ricinus communis]
          Length = 765

 Score =  190 bits (482), Expect = 1e-46
 Identities = 94/117 (80%), Positives = 105/117 (89%)
 Frame = -2

Query: 351 SLIEKCSRRDARKSETMLPLIRLKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKAAK 172
           +LIEK +++   +SE  LPL+R+KVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKA++
Sbjct: 346 NLIEKSNKKAVSRSELKLPLVRVKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASR 405

Query: 171 KAQGEAKIKDGERLRPEELNQQNIEALVAESQLKMEILPVNDLDEALQNFVNKDDRM 1
           K QG+AKI D ERLRPEELNQQNIEALVAES LKMEILPVNDLD AL NFVNKDD+M
Sbjct: 406 KGQGQAKIDDSERLRPEELNQQNIEALVAESNLKMEILPVNDLDVALHNFVNKDDKM 462


>ref|NP_200237.1| double-strand break repair protein MRE11 [Arabidopsis thaliana]
           gi|17380154|sp|Q9XGM2.1|MRE11_ARATH RecName:
           Full=Double-strand break repair protein MRE11
           gi|5524769|emb|CAB50793.1| Mre11 protein [Arabidopsis
           thaliana] gi|9759499|dbj|BAB10749.1| DNA repair and
           meiosis protein Mre11 [Arabidopsis thaliana]
           gi|332009093|gb|AED96476.1| double-strand break repair
           protein MRE11 [Arabidopsis thaliana]
          Length = 720

 Score =  187 bits (476), Expect = 6e-46
 Identities = 93/117 (79%), Positives = 103/117 (88%)
 Frame = -2

Query: 351 SLIEKCSRRDARKSETMLPLIRLKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKAAK 172
           +LIEK S++   +SE  LPL+R+KVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKA+K
Sbjct: 343 NLIEKASKKAVNRSEIKLPLVRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASK 402

Query: 171 KAQGEAKIKDGERLRPEELNQQNIEALVAESQLKMEILPVNDLDEALQNFVNKDDRM 1
           K + EA I D ERLRPEELNQQNIEALVAES LKMEILPVNDLD AL NFVNKDD++
Sbjct: 403 KGRSEANIDDSERLRPEELNQQNIEALVAESNLKMEILPVNDLDVALHNFVNKDDKL 459


>ref|XP_004154884.1| PREDICTED: double-strand break repair protein MRE11-like [Cucumis
           sativus]
          Length = 739

 Score =  187 bits (475), Expect = 8e-46
 Identities = 93/117 (79%), Positives = 103/117 (88%)
 Frame = -2

Query: 351 SLIEKCSRRDARKSETMLPLIRLKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKAAK 172
           +LIEK S+R   +SE  LPL+R+KVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKA++
Sbjct: 346 NLIEKSSKRVVNRSELKLPLVRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASR 405

Query: 171 KAQGEAKIKDGERLRPEELNQQNIEALVAESQLKMEILPVNDLDEALQNFVNKDDRM 1
           K + E KI D ERLRPEELNQQNIEALVAE+ LKMEILPVNDLD AL NFVNKDD+M
Sbjct: 406 KGRNEVKIDDSERLRPEELNQQNIEALVAENNLKMEILPVNDLDVALHNFVNKDDKM 462


>ref|XP_004146869.1| PREDICTED: LOW QUALITY PROTEIN: double-strand break repair protein
           MRE11-like [Cucumis sativus]
          Length = 747

 Score =  187 bits (475), Expect = 8e-46
 Identities = 93/117 (79%), Positives = 103/117 (88%)
 Frame = -2

Query: 351 SLIEKCSRRDARKSETMLPLIRLKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKAAK 172
           +LIEK S+R   +SE  LPL+R+KVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKA++
Sbjct: 355 NLIEKSSKRVVNRSELKLPLVRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASR 414

Query: 171 KAQGEAKIKDGERLRPEELNQQNIEALVAESQLKMEILPVNDLDEALQNFVNKDDRM 1
           K + E KI D ERLRPEELNQQNIEALVAE+ LKMEILPVNDLD AL NFVNKDD+M
Sbjct: 415 KGRNEVKIDDSERLRPEELNQQNIEALVAENNLKMEILPVNDLDVALHNFVNKDDKM 471


>ref|XP_002864322.1| hypothetical protein ARALYDRAFT_495511 [Arabidopsis lyrata subsp.
           lyrata] gi|297310157|gb|EFH40581.1| hypothetical protein
           ARALYDRAFT_495511 [Arabidopsis lyrata subsp. lyrata]
          Length = 733

 Score =  187 bits (474), Expect = 1e-45
 Identities = 93/117 (79%), Positives = 102/117 (87%)
 Frame = -2

Query: 351 SLIEKCSRRDARKSETMLPLIRLKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKAAK 172
           +LIEK S+    +SE  LPL+R+KVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKA+K
Sbjct: 343 NLIEKASKNAVNRSEIKLPLVRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKASK 402

Query: 171 KAQGEAKIKDGERLRPEELNQQNIEALVAESQLKMEILPVNDLDEALQNFVNKDDRM 1
           K + EA I D ERLRPEELNQQNIEALVAES LKMEILPVNDLD AL NFVNKDD++
Sbjct: 403 KGRSEANIDDSERLRPEELNQQNIEALVAESNLKMEILPVNDLDVALHNFVNKDDKL 459


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