BLASTX nr result

ID: Atractylodes22_contig00016431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016431
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155478.1| PREDICTED: pentatricopeptide repeat-containi...    85   7e-15
ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containi...    85   7e-15
ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
ref|XP_004137020.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
ref|XP_002319039.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12

>ref|XP_004155478.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 259

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/89 (47%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
 Frame = -3

Query: 263 SWNEFYCASSRFFRVLLYSTQTLTPNHVATATDATLYHRLVRSRDP--SVLPLLDQWVAE 90
           SW   +C++ +  R L YST++L     + +T+ TL+ R+ R+ DP  S++ +LDQWV E
Sbjct: 9   SW--LFCSNFKLLRALFYSTKSLP----SPSTEDTLFRRVYRAGDPRTSIVRVLDQWVEE 62

Query: 89  GRAVDQEDLHKIIKQIRKFGRYKHALQIC 3
           GR V+Q DL K+IKQ+R FGR+ HALQ+C
Sbjct: 63  GRQVNQSDLQKLIKQLRTFGRFNHALQLC 91


>ref|XP_004136821.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 486

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/89 (47%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
 Frame = -3

Query: 263 SWNEFYCASSRFFRVLLYSTQTLTPNHVATATDATLYHRLVRSRDP--SVLPLLDQWVAE 90
           SW   +C++ +  R L YST++L     + +T+ TL+ R+ R+ DP  S++ +LDQWV E
Sbjct: 9   SW--LFCSNFKLLRALFYSTKSLP----SPSTEDTLFRRVYRAGDPRTSIVRVLDQWVEE 62

Query: 89  GRAVDQEDLHKIIKQIRKFGRYKHALQIC 3
           GR V+Q DL K+IKQ+R FGR+ HALQ+C
Sbjct: 63  GRQVNQSDLQKLIKQLRTFGRFNHALQLC 91


>ref|XP_004155477.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 493

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
 Frame = -3

Query: 263 SWNEFYCASSRFFRVLLYSTQTLTPNHVATATDATLYHRLVRSRDP--SVLPLLDQWVAE 90
           SW   +C++ +  R L YST++L     + +T+ TL+ R+ R+ DP  S++ +LDQWV E
Sbjct: 9   SW--LFCSNFKLLRALFYSTKSLP----SPSTEDTLFRRVYRAGDPRTSIVRVLDQWVEE 62

Query: 89  GRAVDQEDLHKIIKQIRKFGRYKHALQIC 3
           GR V Q DL  +IKQ+RKFGR+  ALQ+C
Sbjct: 63  GRQVKQSDLQTLIKQLRKFGRFNQALQLC 91


>ref|XP_004137020.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Cucumis sativus]
          Length = 146

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/89 (46%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
 Frame = -3

Query: 263 SWNEFYCASSRFFRVLLYSTQTLTPNHVATATDATLYHRLVRSRDP--SVLPLLDQWVAE 90
           SW   +C++ +  R L YST++L     + +T+ TL+ R+ R+ DP  S++ +LDQWV E
Sbjct: 9   SW--LFCSNFKLLRALFYSTKSLP----SPSTEDTLFRRVYRAGDPRTSIVRVLDQWVEE 62

Query: 89  GRAVDQEDLHKIIKQIRKFGRYKHALQIC 3
           GR V Q DL  +IKQ+RKFGR+  ALQ+C
Sbjct: 63  GRQVKQSDLQTLIKQLRKFGRFNQALQLC 91


>ref|XP_002319039.1| predicted protein [Populus trichocarpa] gi|222857415|gb|EEE94962.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/45 (77%), Positives = 41/45 (91%)
 Frame = +2

Query: 335 GELRREILEQVDKELSKGDDRAALSLVKDLKSKPGGLRCFGAAQQ 469
           G  R+++LEQVDKELSKGD+RAALSLVKDL+ KPGGLRCFGA +Q
Sbjct: 28  GVQRQQVLEQVDKELSKGDERAALSLVKDLQGKPGGLRCFGAGRQ 72


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