BLASTX nr result

ID: Atractylodes22_contig00016418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016418
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...    96   3e-18
emb|CBI27434.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|2...    88   6e-16
emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]    88   8e-16
ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    87   1e-15

>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 46/206 (22%)
 Frame = +3

Query: 3   LLLHRGPLLHFGLSIDELNMSSEIDQIILYLSLSNTLKSFSLVNVLDSEYKLHSSLFSFQ 182
           LLLH GP+  F LS  +L   S+ID+ IL+LS S+ +K F L       YK+ SSLFSF+
Sbjct: 87  LLLHNGPIQKFKLSHRDLLGVSDIDRWILHLSRSS-IKEFILEIWKGQRYKVPSSLFSFE 145

Query: 183 PLEKLYLTCCAFEPPLTYNGLGMLRSLTFSDVDITAKMLQNLLINCPLLEKFTLIGY--- 353
            L  L L  C  +PPLT+ G   L+SL    + +T  + +NL+ +CPLLE+ TL+ +   
Sbjct: 146 HLIHLELFNCLLQPPLTFKGFRSLKSLDLQHITLTQNVFENLIFSCPLLERLTLMNFDGF 205

Query: 354 -------------------------------------------QQNFTEGEKFTFAELFE 404
                                                       +N   G        F 
Sbjct: 206 THLNINAPNLQFFDIGGVYDDVTFENTFQLTLVSIGLYVNVQNDRNVGHGSSSKLLRFFA 265

Query: 405 CLPSIVQLEISEYYMEYLAAGGMPPK 482
            LP I +LE+  Y+++YL+ G +P +
Sbjct: 266 NLPHIRRLEVQSYFLKYLSIGNVPSR 291


>emb|CBI27434.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/117 (41%), Positives = 69/117 (58%)
 Frame = +3

Query: 3   LLLHRGPLLHFGLSIDELNMSSEIDQIILYLSLSNTLKSFSLVNVLDSEYKLHSSLFSFQ 182
           LLLH+GP++ F L +DEL   S+ID  I +LS ++ ++ F+L       YKL S  F+F 
Sbjct: 114 LLLHKGPIVKFVLEVDELESYSDIDHWINFLS-NHDIQEFTLSRAKTEHYKLPSYFFTFL 172

Query: 183 PLEKLYLTCCAFEPPLTYNGLGMLRSLTFSDVDITAKMLQNLLINCPLLEKFTLIGY 353
            L  L L  CAF PP  + G   L SL   D+ + A+   +L+ +CPLLE+ T+ GY
Sbjct: 173 HLRHLKLRGCAFRPPPRFKGFSKLISLQLEDILMDAETFGSLISSCPLLEQLTVSGY 229


>ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|222844192|gb|EEE81739.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 63/206 (30%), Positives = 91/206 (44%), Gaps = 46/206 (22%)
 Frame = +3

Query: 3   LLLHRGPLLHFGLSIDELNMSSEIDQIILYLSLSNTLKSFSLVNVLDSEYKLHSSLFSFQ 182
           LLLH GP+  F LS  +L   S+ID+ IL+LS  +T K F L      +YKL S LFSF+
Sbjct: 166 LLLHNGPIYKFKLSHCDLLAVSDIDRWILHLSRGST-KEFVLEIWKGQQYKLPSCLFSFK 224

Query: 183 PLEKLYLTCCAFEPPLTYNGLGMLRSLTFSDVDITAKMLQNLLINCPLLEKFTLIGY--- 353
            L  L L  C  +PPL + G   L++L    V +  ++ + L+ +C +LE+ TLI +   
Sbjct: 225 NLVYLELFNCLLKPPLAFKGFRNLKNLDLQHVTLAQEVFEKLISSCAMLERLTLINFDGF 284

Query: 354 -------------------------------------------QQNFTEGEKFTFAELFE 404
                                                       QN + G        F 
Sbjct: 285 THLNINAPNLQFFDVGGVFDDVSFENTFVLALVSIGLYVNVKNDQNVSYGSSSKLLRFFV 344

Query: 405 CLPSIVQLEISEYYMEYLAAGGMPPK 482
            LP + +LEI  Y+++YLA G +P K
Sbjct: 345 NLPHVRRLEIQSYFLKYLAIGKVPSK 370


>emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]
          Length = 416

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 63/206 (30%), Positives = 90/206 (43%), Gaps = 46/206 (22%)
 Frame = +3

Query: 3   LLLHRGPLLHFGLSIDELNMSSEIDQIILYLSLSNTLKSFSLVNVLDSEYKLHSSLFSFQ 182
           LLLH GP+  F LS  +    S+ID+ ILYLS +  ++ F L       YKL S L++ Q
Sbjct: 77  LLLHTGPIHKFRLSHRDFLGGSDIDRWILYLSRT-PIREFILEIWKGQHYKLPSCLYNCQ 135

Query: 183 PLEKLYLTCCAFEPPLTYNGLGMLRSLTFSDVDITAKMLQNLLINCPLLEKFTLIGY--- 353
            L  L L     +PP T+ G   L+SL    + +     +NL+ +CPLLEKFTL+ +   
Sbjct: 136 SLIHLELFNSLLKPPPTFKGFXSLKSLDLQHIIMAQDAFENLISSCPLLEKFTLMNFDGF 195

Query: 354 -------------------------------------------QQNFTEGEKFTFAELFE 404
                                                       +N  +G      + F 
Sbjct: 196 THLNIHAPNLQFFDTGGVFYDVNFKNTFLLATVSIGLYVDITNDKNLADGNSRNLVKFFA 255

Query: 405 CLPSIVQLEISEYYMEYLAAGGMPPK 482
            LP I +LEI  Y+++YLAAG +P K
Sbjct: 256 HLPRIQRLEIQSYFLKYLAAGNVPGK 281


>ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
           vinifera]
          Length = 416

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 63/206 (30%), Positives = 90/206 (43%), Gaps = 46/206 (22%)
 Frame = +3

Query: 3   LLLHRGPLLHFGLSIDELNMSSEIDQIILYLSLSNTLKSFSLVNVLDSEYKLHSSLFSFQ 182
           LLLH GP+  F LS  +    S+ID+ ILYLS +  ++ F L       YKL S L++ Q
Sbjct: 77  LLLHTGPIHKFRLSHRDFLGGSDIDRWILYLSRT-PIREFILEIWKGQHYKLPSCLYNCQ 135

Query: 183 PLEKLYLTCCAFEPPLTYNGLGMLRSLTFSDVDITAKMLQNLLINCPLLEKFTLIGY--- 353
            L  L L     +PP T+ G   L+SL    + +     +NL+ +CPLLEKFTL+ +   
Sbjct: 136 SLIHLELFNSLLKPPPTFKGFMSLKSLDLQHIIMAQDAFENLISSCPLLEKFTLMNFDGF 195

Query: 354 -------------------------------------------QQNFTEGEKFTFAELFE 404
                                                       +N  +G      + F 
Sbjct: 196 THLNIHAPNLQFFDTGGVFYDVNFKNTFLLATVSIGLYVDITNDKNLADGNSRNLVKFFA 255

Query: 405 CLPSIVQLEISEYYMEYLAAGGMPPK 482
            LP I +LEI  Y+++YLAAG +P K
Sbjct: 256 HLPRIQRLEIQSYFLKYLAAGNVPGK 281


Top