BLASTX nr result

ID: Atractylodes22_contig00016400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016400
         (2487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing fac...   276   3e-71
emb|CBI40588.3| unnamed protein product [Vitis vinifera]              275   4e-71
ref|XP_002523299.1| arginine/serine-rich splicing factor, putati...   275   4e-71
ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing fac...   274   1e-70
ref|XP_002302651.1| predicted protein [Populus trichocarpa] gi|2...   268   4e-69

>ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Cucumis
           sativus] gi|449477961|ref|XP_004155176.1| PREDICTED:
           arginine/serine-rich-splicing factor RSP31-like [Cucumis
           sativus]
          Length = 253

 Score =  276 bits (705), Expect = 3e-71
 Identities = 144/198 (72%), Positives = 151/198 (76%), Gaps = 3/198 (1%)
 Frame = -3

Query: 922 AGFAFVYYEDERDAEDAIHALDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 743
           +GFAFVY+EDERDAEDAI  LDN PFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT
Sbjct: 35  SGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 94

Query: 742 LFIINFDPIRTRVRDIERHFEPYGNVLHVRIRRNFAFVQFETQEEATKALECTHMSKILD 563
           LF+INFDPIRTRVRDIERHFEPYG VL+VRIRRNFAFVQFETQE+ATKALECTHMSKILD
Sbjct: 95  LFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILD 154

Query: 562 RVVSVEYALRDDSERG---SRSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARSPV 392
           RVVSVEYALRDD ERG     S                                RA SP 
Sbjct: 155 RVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYGRAHSPA 214

Query: 391 YDKYSGPSYERPRSPAYG 338
           YD+Y+GP YER RSP YG
Sbjct: 215 YDRYNGP-YERRRSPDYG 231


>emb|CBI40588.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score =  275 bits (703), Expect = 4e-71
 Identities = 139/204 (68%), Positives = 155/204 (75%)
 Frame = -3

Query: 949 FSCLTLFTLAGFAFVYYEDERDAEDAIHALDNAPFGYDRRRLSVEWARGERGRHRDGSKS 770
           F    L   +GFAFVY+EDE DA+DAI  LDN PFGYDRRRLSVEWA+GERGRHR+GS+S
Sbjct: 9   FCASALHISSGFAFVYFEDEHDADDAIRGLDNIPFGYDRRRLSVEWAKGERGRHREGSRS 68

Query: 769 MANQRPTKTLFIINFDPIRTRVRDIERHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 590
           MANQRPTKTLF+INFDPIRTR+RDIERHFEPYG VLHVRIRRNFAFVQ+ETQE+ATKALE
Sbjct: 69  MANQRPTKTLFVINFDPIRTRIRDIERHFEPYGKVLHVRIRRNFAFVQYETQEDATKALE 128

Query: 589 CTHMSKILDRVVSVEYALRDDSERGSRSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 410
           CTHMSKILDRVVSVEYALRDDS++   S                                
Sbjct: 129 CTHMSKILDRVVSVEYALRDDSDKYD-SPRRGGYSRRGESPYGRSPSPVNRRGRPSPDYG 187

Query: 409 RARSPVYDKYSGPSYERPRSPAYG 338
           RA+SPVYD+Y+GP+YER RSP YG
Sbjct: 188 RAQSPVYDRYNGPAYERNRSPEYG 211


>ref|XP_002523299.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223537387|gb|EEF39015.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 259

 Score =  275 bits (703), Expect = 4e-71
 Identities = 140/195 (71%), Positives = 151/195 (77%)
 Frame = -3

Query: 922 AGFAFVYYEDERDAEDAIHALDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 743
           +GFAFVY+EDERDA DAI  LDN  FGYDRR+LSVEWARGERGRHRDGS+SMANQRPTKT
Sbjct: 36  SGFAFVYFEDERDAADAIRGLDNISFGYDRRKLSVEWARGERGRHRDGSRSMANQRPTKT 95

Query: 742 LFIINFDPIRTRVRDIERHFEPYGNVLHVRIRRNFAFVQFETQEEATKALECTHMSKILD 563
           LF+INFDPI TRV DI+RHFE YG VLHVRIRRNFAFVQFETQE+ATKALECTHM+KILD
Sbjct: 96  LFVINFDPIHTRVEDIKRHFERYGEVLHVRIRRNFAFVQFETQEDATKALECTHMTKILD 155

Query: 562 RVVSVEYALRDDSERGSRSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARSPVYDK 383
           RVVSVEYALRDDSERG +S                                RARSPVYDK
Sbjct: 156 RVVSVEYALRDDSERGDKS------DSPRRGSHYGRSPSPVYRRRPSPDYGRARSPVYDK 209

Query: 382 YSGPSYERPRSPAYG 338
           Y+GPSY+R RSP YG
Sbjct: 210 YNGPSYDRRRSPEYG 224


>ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Vitis
           vinifera]
          Length = 241

 Score =  274 bits (700), Expect = 1e-70
 Identities = 137/195 (70%), Positives = 153/195 (78%)
 Frame = -3

Query: 922 AGFAFVYYEDERDAEDAIHALDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 743
           +GFAFVY+EDE DA+DAI  LDN PFGYDRRRLSVEWA+GERGRHR+GS+SMANQRPTKT
Sbjct: 35  SGFAFVYFEDEHDADDAIRGLDNIPFGYDRRRLSVEWAKGERGRHREGSRSMANQRPTKT 94

Query: 742 LFIINFDPIRTRVRDIERHFEPYGNVLHVRIRRNFAFVQFETQEEATKALECTHMSKILD 563
           LF+INFDPIRTR+RDIERHFEPYG VLHVRIRRNFAFVQ+ETQE+ATKALECTHMSKILD
Sbjct: 95  LFVINFDPIRTRIRDIERHFEPYGKVLHVRIRRNFAFVQYETQEDATKALECTHMSKILD 154

Query: 562 RVVSVEYALRDDSERGSRSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARSPVYDK 383
           RVVSVEYALRDDS++   S                                RA+SPVYD+
Sbjct: 155 RVVSVEYALRDDSDKYD-SPRRGGYSRRGESPYGRSPSPVNRRGRPSPDYGRAQSPVYDR 213

Query: 382 YSGPSYERPRSPAYG 338
           Y+GP+YER RSP YG
Sbjct: 214 YNGPAYERNRSPEYG 228


>ref|XP_002302651.1| predicted protein [Populus trichocarpa] gi|222844377|gb|EEE81924.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  268 bits (686), Expect = 4e-69
 Identities = 136/195 (69%), Positives = 148/195 (75%)
 Frame = -3

Query: 922 AGFAFVYYEDERDAEDAIHALDNAPFGYDRRRLSVEWARGERGRHRDGSKSMANQRPTKT 743
           +GFAFVY+ED+RDA DA+  LDN PFGYDRRRLSVEWARGERGRHRDG +S ANQRPTKT
Sbjct: 36  SGFAFVYFEDDRDAADAVRGLDNIPFGYDRRRLSVEWARGERGRHRDGPRSTANQRPTKT 95

Query: 742 LFIINFDPIRTRVRDIERHFEPYGNVLHVRIRRNFAFVQFETQEEATKALECTHMSKILD 563
           LF+INFDPI TRV DI+RHFE YG VLHVRIRRNFAFVQFETQE+ATKALECTHM+KILD
Sbjct: 96  LFVINFDPIHTRVEDIKRHFERYGEVLHVRIRRNFAFVQFETQEDATKALECTHMTKILD 155

Query: 562 RVVSVEYALRDDSERGSRSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARSPVYDK 383
           RVVSVEYALRDDSERG R                                 RARSPVYDK
Sbjct: 156 RVVSVEYALRDDSERGDR------YDSPRRGSYNGRSPSPVYRRRPSPDYVRARSPVYDK 209

Query: 382 YSGPSYERPRSPAYG 338
           Y+GP Y+R +SP YG
Sbjct: 210 YNGPVYDRRQSPDYG 224


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