BLASTX nr result

ID: Atractylodes22_contig00016398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016398
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317281.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_004137366.1| PREDICTED: F-box protein At5g46170-like [Cuc...    64   2e-08
emb|CBI30928.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_002278480.1| PREDICTED: F-box protein At5g46170 isoform 1...    63   3e-08
emb|CAN73778.1| hypothetical protein VITISV_042179 [Vitis vinifera]    63   3e-08

>ref|XP_002317281.1| predicted protein [Populus trichocarpa] gi|222860346|gb|EEE97893.1|
           predicted protein [Populus trichocarpa]
          Length = 405

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/65 (52%), Positives = 42/65 (64%)
 Frame = -1

Query: 195 VSSLRPDLTNKIYPEPPYIFSSPEEGXXXXXXXXXXXXXLVFNKIGDVRALGRCCVVCKR 16
           +SSLRPD T++I+PEP    ++                 LVFNKIGDV+ALGRCCVVC R
Sbjct: 1   MSSLRPDPTSRIHPEPEPTTTTSSPSIDHFDRLPDSLLLLVFNKIGDVKALGRCCVVCLR 60

Query: 15  FHTLV 1
           FH+LV
Sbjct: 61  FHSLV 65


>ref|XP_004137366.1| PREDICTED: F-box protein At5g46170-like [Cucumis sativus]
           gi|449520084|ref|XP_004167064.1| PREDICTED: F-box
           protein At5g46170-like [Cucumis sativus]
          Length = 406

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 36/72 (50%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
 Frame = -1

Query: 195 VSSLRPDLTNKIYPEPPYIFSSPEEGXXXXXXXXXXXXXL-------VFNKIGDVRALGR 37
           +SSLR DLT+KIYPEP  +FS                  L       +FNKIGDV+ALGR
Sbjct: 1   MSSLRLDLTSKIYPEPDSLFSFNSSSISSTSCCIDHFDRLPDSLLLLIFNKIGDVKALGR 60

Query: 36  CCVVCKRFHTLV 1
           CCVV +RFH LV
Sbjct: 61  CCVVSRRFHCLV 72


>emb|CBI30928.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/69 (50%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
 Frame = -1

Query: 198 MVSSLRPDLTNKIYPEP---PYIFSSPEEGXXXXXXXXXXXXXLVFNKIGDVRALGRCCV 28
           M SS+RPD + +I+PEP   P       E              LVFNKIGDV+ALGRCCV
Sbjct: 33  MASSMRPDPSTRIWPEPQNSPPPVMMMAEAIDHFDRLPDSLLLLVFNKIGDVKALGRCCV 92

Query: 27  VCKRFHTLV 1
           V +RFHTLV
Sbjct: 93  VSRRFHTLV 101


>ref|XP_002278480.1| PREDICTED: F-box protein At5g46170 isoform 1 [Vitis vinifera]
           gi|359483890|ref|XP_003633032.1| PREDICTED: F-box
           protein At5g46170 isoform 2 [Vitis vinifera]
          Length = 399

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/69 (50%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
 Frame = -1

Query: 198 MVSSLRPDLTNKIYPEP---PYIFSSPEEGXXXXXXXXXXXXXLVFNKIGDVRALGRCCV 28
           M SS+RPD + +I+PEP   P       E              LVFNKIGDV+ALGRCCV
Sbjct: 1   MASSMRPDPSTRIWPEPQNSPPPVMMMAEAIDHFDRLPDSLLLLVFNKIGDVKALGRCCV 60

Query: 27  VCKRFHTLV 1
           V +RFHTLV
Sbjct: 61  VSRRFHTLV 69


>emb|CAN73778.1| hypothetical protein VITISV_042179 [Vitis vinifera]
          Length = 399

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/69 (50%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
 Frame = -1

Query: 198 MVSSLRPDLTNKIYPEP---PYIFSSPEEGXXXXXXXXXXXXXLVFNKIGDVRALGRCCV 28
           M SS+RPD + +I+PEP   P       E              LVFNKIGDV+ALGRCCV
Sbjct: 1   MASSMRPDPSTRIWPEPQNSPPPVMMMAEAIDHFDRLPDSLLLLVFNKIGDVKALGRCCV 60

Query: 27  VCKRFHTLV 1
           V +RFHTLV
Sbjct: 61  VSRRFHTLV 69


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