BLASTX nr result

ID: Atractylodes22_contig00016379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016379
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16338.3| unnamed protein product [Vitis vinifera]               86   4e-15
ref|XP_003520650.1| PREDICTED: uncharacterized protein LOC100813...    74   9e-12
ref|XP_002318937.1| chromatin remodeling complex subunit [Populu...    70   2e-10
ref|XP_003575536.1| PREDICTED: uncharacterized protein LOC100840...    68   7e-10
ref|XP_002328309.1| chromatin remodeling complex subunit [Populu...    68   9e-10

>emb|CBI16338.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 45/91 (49%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
 Frame = -2

Query: 322 SDDKIKELLVKLPTIPAGSPSGMDNIHLSYVKKLHDAWIKGHNSLVFDDQERTMRIVLFI 143
           +D   K  LVKL  +P     G+D+ HLS V KL + W KG N++V DD +R MR+VLFI
Sbjct: 662 TDKGRKASLVKLSKLPGAGSIGIDDNHLSCVNKLRENWHKGLNAIVIDDHDRVMRVVLFI 721

Query: 142 FSLKG-VTLPFLLITTSSSVPRWEAMFLKIA 53
            SL+  V  PFL+I+TSS +P WEA F ++A
Sbjct: 722 LSLQADVCRPFLIISTSSVLPLWEAEFSRLA 752


>ref|XP_003520650.1| PREDICTED: uncharacterized protein LOC100813574 [Glycine max]
          Length = 1429

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
 Frame = -2

Query: 292 KLPTIPAGSPSGMDNIHLSYVKKLHDAWIKGHNSLVFD---DQERTMRIVLFIFSLK-GV 125
           +L  +P G   G  N HL+YV KL   W KG ++L+ D   DQER M+++LFI SL   V
Sbjct: 146 ELSVLPTGDSPGFYNQHLTYVNKLRMCWHKGQSALIVDDQIDQERVMKVILFILSLNCNV 205

Query: 124 TLPFLLITTSSSVPRWEAMFLKIA 53
             PFL+I+TS+++  WE  FL++A
Sbjct: 206 RRPFLIISTSAALSVWETEFLRLA 229


>ref|XP_002318937.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222857313|gb|EEE94860.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 2283

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
 Frame = -2

Query: 304 ELLVKLPTIPAGSPSGMDNIHLSYVKKLHDAWIKGHNSLVFDDQERTMRIVLFIFSL-KG 128
           E L  +  + AG     D  HL +V  LHD W+KG N+++ DDQE+  +++ FI SL   
Sbjct: 572 EYLSIIDKLSAGGSPEFDYNHLDFVNYLHDYWLKGENAVLIDDQEQITKVISFILSLSSN 631

Query: 127 VTLPFLLITTSSSVPRWEAMFLKIA 53
            + PFL+ITTS+S+  WE    ++A
Sbjct: 632 ASWPFLIITTSASLHSWEEELFRLA 656


>ref|XP_003575536.1| PREDICTED: uncharacterized protein LOC100840452 [Brachypodium
           distachyon]
          Length = 1992

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
 Frame = -2

Query: 328 ASSDDKIKEL----LVKLPTIPAGSPSGMDNIHLSYVKKLHDAWIKGHNSLVFDDQERTM 161
           AS   KIK+       KL  +P G P G+DN+HLS + +L + W     +++ DDQER +
Sbjct: 417 ASDTAKIKKAKQSPFQKLRRLPDGCPPGLDNVHLSSLNQLREFWHNSRGAILVDDQERII 476

Query: 160 RIVLFIFS-LKGVTLPFLLITTSSSVPRWEAMFLKIA 53
           + VLF  S L  V+ P L+++TS S+  WEA F ++A
Sbjct: 477 KTVLFAMSILPDVSCPLLIVSTSVSL--WEAKFNRLA 511


>ref|XP_002328309.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222837824|gb|EEE76189.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1996

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/86 (39%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = -2

Query: 307 KELLVKLPTIPAGSPSGMDNIHLSYVKKLHDAWIKGHNSLVFDDQERTMRIVLFIFSL-K 131
           K  LVKL  + AG     DN HL +V  L + W +G N ++ DDQE+  +++ FI S+  
Sbjct: 204 KVSLVKLLQLSAGGSPEFDNNHLDFVNYLLECWHRGENVVLIDDQEQIAKVIYFILSISS 263

Query: 130 GVTLPFLLITTSSSVPRWEAMFLKIA 53
             T PFL+ITTS+++  WE    ++A
Sbjct: 264 NATWPFLIITTSAALHSWEEGLFRLA 289


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