BLASTX nr result

ID: Atractylodes22_contig00016353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016353
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002883000.1| ATPDR1/PDR1 [Arabidopsis lyrata subsp. lyrat...    85   5e-15
ref|NP_001189911.1| ABC transporter G family member 29 [Arabidop...    84   1e-14
ref|NP_566543.1| ABC transporter G family member 29 [Arabidopsis...    84   1e-14
gb|AAD39650.1|AC007591_15 Similar to gb|Z70524 PDR5-like ABC tra...    83   2e-14
ref|XP_002892853.1| ATPDR7/PDR7 [Arabidopsis lyrata subsp. lyrat...    83   2e-14

>ref|XP_002883000.1| ATPDR1/PDR1 [Arabidopsis lyrata subsp. lyrata]
           gi|297328840|gb|EFH59259.1| ATPDR1/PDR1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1420

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 36/51 (70%), Positives = 42/51 (82%)
 Frame = +2

Query: 2   RLPVIYKERDLLFHPPWALTILTFLLGVPISVVESTVWTIVTYGLIGFAPE 154
           RLPV YK+RDLLFHPPW  T+ TFLLG+PIS+ ES VW  +TY +IGFAPE
Sbjct: 577 RLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIFESVVWVSITYYMIGFAPE 627


>ref|NP_001189911.1| ABC transporter G family member 29 [Arabidopsis thaliana]
           gi|332642279|gb|AEE75800.1| ABC transporter G family
           member 29 [Arabidopsis thaliana]
          Length = 1411

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 35/51 (68%), Positives = 42/51 (82%)
 Frame = +2

Query: 2   RLPVIYKERDLLFHPPWALTILTFLLGVPISVVESTVWTIVTYGLIGFAPE 154
           RLPV YK+RDLLFHPPW  ++ TFLLG+PIS+ ES VW  +TY +IGFAPE
Sbjct: 572 RLPVFYKQRDLLFHPPWTFSLPTFLLGIPISIFESVVWVTITYYMIGFAPE 622


>ref|NP_566543.1| ABC transporter G family member 29 [Arabidopsis thaliana]
           gi|97180273|sp|Q94A18.2|AB29G_ARATH RecName: Full=ABC
           transporter G family member 29; Short=ABC transporter
           ABCG.29; Short=AtABCG29; AltName: Full=Pleiotropic drug
           resistance protein 1 gi|2062169|gb|AAB63643.1| ABC
           transporter (PDR5-like) isolog [Arabidopsis thaliana]
           gi|9279716|dbj|BAB01273.1| ABC transporter [Arabidopsis
           thaliana] gi|28144351|tpg|DAA00870.1| TPA_exp: PDR1 ABC
           transporter [Arabidopsis thaliana]
           gi|332642278|gb|AEE75799.1| ABC transporter G family
           member 29 [Arabidopsis thaliana]
          Length = 1416

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 35/51 (68%), Positives = 42/51 (82%)
 Frame = +2

Query: 2   RLPVIYKERDLLFHPPWALTILTFLLGVPISVVESTVWTIVTYGLIGFAPE 154
           RLPV YK+RDLLFHPPW  ++ TFLLG+PIS+ ES VW  +TY +IGFAPE
Sbjct: 577 RLPVFYKQRDLLFHPPWTFSLPTFLLGIPISIFESVVWVTITYYMIGFAPE 627


>gb|AAD39650.1|AC007591_15 Similar to gb|Z70524 PDR5-like ABC transporter from Spirodela
           polyrrhiza and is a member of the PF|00005 ABC
           transporter family. ESTs gb|N97039 and gb|T43169 come
           from this gene [Arabidopsis thaliana]
          Length = 1451

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 35/51 (68%), Positives = 42/51 (82%)
 Frame = +2

Query: 2   RLPVIYKERDLLFHPPWALTILTFLLGVPISVVESTVWTIVTYGLIGFAPE 154
           RLPV YK+RDLLFHPPW  T+ TFLLG+PIS+ EST W +VTY  IG+AP+
Sbjct: 599 RLPVFYKQRDLLFHPPWTYTLPTFLLGIPISIFESTAWMVVTYYSIGYAPD 649


>ref|XP_002892853.1| ATPDR7/PDR7 [Arabidopsis lyrata subsp. lyrata]
           gi|297338695|gb|EFH69112.1| ATPDR7/PDR7 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1445

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 35/51 (68%), Positives = 42/51 (82%)
 Frame = +2

Query: 2   RLPVIYKERDLLFHPPWALTILTFLLGVPISVVESTVWTIVTYGLIGFAPE 154
           RLPV YK+RDLLFHPPW  T+ TFLLG+PIS+ EST W +VTY  IG+AP+
Sbjct: 599 RLPVFYKQRDLLFHPPWTYTLPTFLLGIPISIFESTAWMVVTYYSIGYAPD 649


Top