BLASTX nr result

ID: Atractylodes22_contig00016262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016262
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632479.1| PREDICTED: putative uncharacterized protein ...    64   1e-08
emb|CBI33150.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_003601917.1| Pre-mRNA splicing factor ATP-dependent RNA h...    61   2e-07

>ref|XP_003632479.1| PREDICTED: putative uncharacterized protein At4g01020,
           chloroplastic-like [Vitis vinifera]
          Length = 1686

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/92 (38%), Positives = 52/92 (56%)
 Frame = +2

Query: 299 RPPGSPPSCTTNRSPNFIIELRAQTSDYNSYNRHEIVTLMGKFQCHPDDFTIYENGVVAA 478
           RP  +PP   +   PNFIIELR        + + ++  L+   +  P+  T+  +G +AA
Sbjct: 51  RPEVAPPFHPS--PPNFIIELRP---GLGGFKKIDVDELLATCKLMPEKVTVLSSGPIAA 105

Query: 479 RFFFQQWPNTLETVVYLWDAVLNGALSFMPRL 574
             FF+QW +TLET+VYLW+  L G   F P+L
Sbjct: 106 TLFFRQWVDTLETMVYLWELRLEGKHLFTPKL 137


>emb|CBI33150.3| unnamed protein product [Vitis vinifera]
          Length = 1988

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/92 (38%), Positives = 52/92 (56%)
 Frame = +2

Query: 299 RPPGSPPSCTTNRSPNFIIELRAQTSDYNSYNRHEIVTLMGKFQCHPDDFTIYENGVVAA 478
           RP  +PP   +   PNFIIELR        + + ++  L+   +  P+  T+  +G +AA
Sbjct: 51  RPEVAPPFHPS--PPNFIIELRP---GLGGFKKIDVDELLATCKLMPEKVTVLSSGPIAA 105

Query: 479 RFFFQQWPNTLETVVYLWDAVLNGALSFMPRL 574
             FF+QW +TLET+VYLW+  L G   F P+L
Sbjct: 106 TLFFRQWVDTLETMVYLWELRLEGKHLFTPKL 137


>ref|XP_003601917.1| Pre-mRNA splicing factor ATP-dependent RNA helicase-like protein
           [Medicago truncatula] gi|355490965|gb|AES72168.1|
           Pre-mRNA splicing factor ATP-dependent RNA helicase-like
           protein [Medicago truncatula]
          Length = 1718

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/108 (33%), Positives = 56/108 (51%)
 Frame = +2

Query: 251 SNHRYFDQRHHHRWRDRPPGSPPSCTTNRSPNFIIELRAQTSDYNSYNRHEIVTLMGKFQ 430
           SNHR+          DRPP   P    +R PNFI++L        + NR ++ +L+GK +
Sbjct: 34  SNHRF----------DRPPERNPP---HRPPNFILKLHLGR---RALNRDDVDSLIGKCK 77

Query: 431 CHPDDFTIYENGVVAARFFFQQWPNTLETVVYLWDAVLNGALSFMPRL 574
            +PD++  Y    VAA   F QW +  + VV+ W++ ++G   F P L
Sbjct: 78  PNPDNYCFYPCDGVAASLNFLQWTDARDAVVWFWESRISGGHDFTPEL 125


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