BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016261
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containi...   122   2e-26
ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containi...   122   3e-26
ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containi...   122   3e-26
ref|XP_002514843.1| pentatricopeptide repeat-containing protein,...   119   3e-25
ref|NP_001031033.1| pentatricopeptide repeat-containing protein ...   118   4e-25

>ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  122 bits (307), Expect = 2e-26
 Identities = 54/113 (47%), Positives = 83/113 (73%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVER 162
           +LI   C  G+WD +  +  EM D+G+ P+++TF+ L+   CKE KV EA+ ++ +M++R
Sbjct: 277 TLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQR 336

Query: 161 GMVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNGY 3
           G+VPNL+TYNSLIDG+C+ G+++ ARE+  SM   S+GL PD I+Y +L+NGY
Sbjct: 337 GIVPNLITYNSLIDGFCMVGDLNSARELFLSM--PSKGLEPDEISYTTLINGY 387



 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/111 (34%), Positives = 60/111 (54%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           L+G L K+  +   F +  EM   G+SP++ T + L    C   +V EA A +  ++ RG
Sbjct: 97  LLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRG 156

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNG 6
            +PN+VTY +LI G C+   +SEA  +   M     G  P+ +TY +L+ G
Sbjct: 157 YIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKL--GCTPNAVTYGTLIKG 205



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/117 (29%), Positives = 71/117 (60%), Gaps = 6/117 (5%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEG------ISPNVITFTTLVVAFCKECKVEEAEAVI 180
           +LI  LC+ G  + A ++ KEM ++         P VIT++ ++   CK  + +EA+ + 
Sbjct: 201 TLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELF 260

Query: 179 NIMVERGMVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLN 9
             M  +GM+P++++Y++LI G+C  G+  +++ + D M    +G+ PD++T++ L++
Sbjct: 261 EEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEM--VDQGVQPDMVTFSVLID 315



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 38/119 (31%), Positives = 70/119 (58%), Gaps = 6/119 (5%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEA----EAVINI 174
           +LI  LC   R  +A R+   M+  G +PN +T+ TL+   C+   V  A    + ++N 
Sbjct: 166 TLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLND 225

Query: 173 MVERGM--VPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNGY 3
             + G+   P ++TY+ +IDG C  G   EA+E+ + M   ++G++PD+I+Y++L++G+
Sbjct: 226 ASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEM--KAQGMIPDVISYSTLIHGF 282



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 29/91 (31%), Positives = 55/91 (60%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           LI  LCK G+ + A+ + +++  EG+ P+V+T+  ++  FCK  +V+ A  +   M E G
Sbjct: 488 LIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENG 547

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEAREILDSM 66
             P+++ YN+L+ G+C   ++ E  ++L  M
Sbjct: 548 CTPDIIAYNTLLCGFCEGNKLEEVIKLLHKM 578



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           L   LC + R  +A   +  +   G  PNV+T+TTL+   C E ++ EA  +   M + G
Sbjct: 132 LANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLG 191

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEA----REILDSMASTSRGLVPDIITYNSLLNG 6
             PN VTY +LI G C  G ++ A    +E+L+  +       P +ITY+ +++G
Sbjct: 192 CTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDG 246



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/111 (30%), Positives = 58/111 (52%)
 Frame = -2

Query: 335 IGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERGM 156
           +  LCK     +A  +  E++      N+  ++ L+   CK  K+E A  +   + + G+
Sbjct: 454 LDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGL 513

Query: 155 VPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNGY 3
            P++VTYN +I G+C  G++  A  + + M     G  PDII YN+LL G+
Sbjct: 514 QPDVVTYNIMIHGFCKVGQVDNANILFEKM--EENGCTPDIIAYNTLLCGF 562



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/92 (33%), Positives = 55/92 (59%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVER 162
           SLI   C +G  + A  +   M  +G+ P+ I++TTL+  +CK  KV+EA  + N M++ 
Sbjct: 347 SLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQV 406

Query: 161 GMVPNLVTYNSLIDGYCLRGEMSEAREILDSM 66
           G  PN+ TY +L+ G   +G++ +A+++   M
Sbjct: 407 GKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVM 438



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/113 (28%), Positives = 59/113 (52%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVER 162
           +L+  L + G+  DA ++   M+  G+S N   +   +   CK   + EA  + N +   
Sbjct: 417 TLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSY 476

Query: 161 GMVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNGY 3
               N+  Y+ LIDG C  G++  A E+ + +  +  GL PD++TYN +++G+
Sbjct: 477 NFKLNIENYSCLIDGLCKAGKLETAWELFEKL--SQEGLQPDVVTYNIMIHGF 527



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 24/76 (31%), Positives = 48/76 (63%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           +I   CK+G+ D+A  + ++ME+ G +P++I + TL+  FC+  K+EE   +++ MV++ 
Sbjct: 523 MIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKD 582

Query: 158 MVPNLVTYNSLIDGYC 111
           + PN  +   ++D  C
Sbjct: 583 VSPNAASCTIVVDMLC 598


>ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  122 bits (306), Expect = 3e-26
 Identities = 55/113 (48%), Positives = 84/113 (74%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVER 162
           SLI   C  G+W+++ R+L EM D+G+ P+++TF  L+   CKE KV EA+ ++ +M+E 
Sbjct: 255 SLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 314

Query: 161 GMVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNGY 3
           G+VP+LVTYNSLI+G+C+ G+++ ARE+  SM   S+G  PD+I+YN L+NGY
Sbjct: 315 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSM--PSKGCEPDVISYNVLINGY 365



 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 43/112 (38%), Positives = 82/112 (73%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           ++  LCK+GR D+A ++ +EM+ +G+ P++I++ +L+  FC   K EE++ +++ M+++G
Sbjct: 221 IVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQG 280

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNGY 3
           + P++VT+N LID  C  G++ EA+++L  M  +  G+VPD++TYNSL+ G+
Sbjct: 281 LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES--GIVPDLVTYNSLIEGF 330



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/117 (35%), Positives = 71/117 (60%), Gaps = 6/117 (5%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDE------GISPNVITFTTLVVAFCKECKVEEAEAVI 180
           +LI  LC  G  + A ++ +EM ++         PNVIT+  +V   CK  + +EA+ + 
Sbjct: 179 TLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLF 238

Query: 179 NIMVERGMVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLN 9
             M  +GM+P++++YNSLI G+C  G+  E++ +LD M    +GL PD++T+N L++
Sbjct: 239 EEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEM--LDQGLQPDMVTFNVLID 293



 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 36/104 (34%), Positives = 65/104 (62%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           LI  LCK G+ + A+ + +++ +EG  PNV+T+T ++  FC+E +V++A  +I  M   G
Sbjct: 466 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 525

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIIT 27
             P+++TYN+L+ G+    ++ E  ++L  MA   + + PD IT
Sbjct: 526 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMA--QKDVSPDAIT 567



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/119 (32%), Positives = 67/119 (56%), Gaps = 6/119 (5%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMV-- 168
           +LI  LC   R  +A R+   M+  G +P+V+T+ TL+   C    +  A  +   M+  
Sbjct: 144 TLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLND 203

Query: 167 ----ERGMVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNGY 3
               E    PN++TYN ++DG C  G   EA+++ + M   ++G++P II+YNSL++G+
Sbjct: 204 ISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEM--KTQGMIPSIISYNSLIHGF 260



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 36/115 (31%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           L+  LC + R  + F     +   G SPN++T+ TL+   C E ++ EA  +   M + G
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEA----REILDSMASTSRGLVPDIITYNSLLNG 6
             P++VTY +LI G C  G ++ A    +E+L+ ++       P++ITYN +++G
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDG 224



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/112 (33%), Positives = 62/112 (55%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVER 162
           SLI   C +G  + A  +   M  +G  P+VI++  L+  + K  KVEEA  + N M+  
Sbjct: 325 SLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLV 384

Query: 161 GMVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNG 6
           G  PN++TY+SL+ G  L G++ +A+++   M   + G+  +  TY   L+G
Sbjct: 385 GKRPNVITYDSLLKGIFLAGKVDDAKKLFSVM--KAHGIAENSYTYGIFLDG 434



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/111 (31%), Positives = 56/111 (50%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           L+  L K+  +   F +  +M   G+S +  T   L+   C   ++ E  A    ++ RG
Sbjct: 75  LLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRG 134

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNG 6
             PN+VTYN+LI G C+   +SEA  +   M     G  PD++TY +L+ G
Sbjct: 135 YSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKL--GCTPDVVTYGTLIKG 183



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/111 (29%), Positives = 56/111 (50%)
 Frame = -2

Query: 335 IGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERGM 156
           +  LCK     +A ++  E++       +     L+   CK  K+E A  +   +   G 
Sbjct: 432 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH 491

Query: 155 VPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNGY 3
            PN+VTY  +I G+C  G++ +A  ++  M   + G  PDIITYN+L+ G+
Sbjct: 492 EPNVVTYTIMIHGFCREGQVDKANVLIQKM--EANGCTPDIITYNTLMRGF 540


>ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  122 bits (306), Expect = 3e-26
 Identities = 56/113 (49%), Positives = 82/113 (72%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVER 162
           SLI   C  G+W++A R+  EM ++G+ PNV+TF  L+   CKE KV EA+ ++ +M++R
Sbjct: 282 SLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQR 341

Query: 161 GMVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNGY 3
           G+VPNL+TYNSLI+G+CL G+++ ARE+  SM   S+G  PD+I Y  L+NGY
Sbjct: 342 GIVPNLLTYNSLIEGFCLVGDLNSARELFVSM--PSKGCEPDVICYTVLINGY 392



 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/112 (43%), Positives = 80/112 (71%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           +I +LCK  R D+A  + +EM+ +G++P VI++T+L+  FC   K EEA+ + N MV +G
Sbjct: 248 IIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQG 307

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNGY 3
           + PN+VT+N LID  C  G++ EA+++L+ M    RG+VP+++TYNSL+ G+
Sbjct: 308 VQPNVVTFNVLIDVLCKEGKVIEAKDLLEVM--IQRGIVPNLLTYNSLIEGF 357



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/117 (29%), Positives = 69/117 (58%), Gaps = 6/117 (5%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEG------ISPNVITFTTLVVAFCKECKVEEAEAVI 180
           +L+  LC+ G    A ++ +EM ++         P VI+++ ++ A CK+ + +EA  + 
Sbjct: 206 TLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLF 265

Query: 179 NIMVERGMVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLN 9
             M  +GM P +++Y SLI G+C  G+  EA+ + + M   ++G+ P+++T+N L++
Sbjct: 266 EEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM--VNQGVQPNVVTFNVLID 320



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 36/111 (32%), Positives = 58/111 (52%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           L+  L K+  +   F +  +M   GISP+  T   L+   C   +V E  AV+  ++ RG
Sbjct: 102 LLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRG 161

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNG 6
            +P++VTY +LI G C+   +S+A  +   M     G  P+ ITY +L+ G
Sbjct: 162 YIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKL--GCTPNAITYGTLMKG 210



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/112 (33%), Positives = 60/112 (53%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVER 162
           SLI   C +G  + A  +   M  +G  P+VI +T L+  +CK  KVEEA  + N M++ 
Sbjct: 352 SLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQV 411

Query: 161 GMVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNG 6
           G  P++ TY +L+ G    G++ +A+++   M     G+  D+  Y   LNG
Sbjct: 412 GKRPDVKTYGALLTGLFQGGKVGDAKKLFGVM--KVYGIPGDLYIYGIFLNG 461



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           L+  LC + R  +   ++  +   G  P+++T+TTL+   C E ++ +A  +   M + G
Sbjct: 137 LLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLG 196

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEA----REILDSMASTSRGLVPDIITYNSLLN 9
             PN +TY +L+ G C  G +S A    +E+L+  +       P +I+Y+ +++
Sbjct: 197 CTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIID 250



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/106 (27%), Positives = 58/106 (54%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           LI  LCK G+ + A+ + +++  E + P+V+T+  ++  FC+  +V +A  +   M + G
Sbjct: 493 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 552

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYN 21
             P+ +TY +LI G+    ++ +  E+L  M      L  +I+ +N
Sbjct: 553 CTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVNILRHN 598



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/111 (27%), Positives = 56/111 (50%)
 Frame = -2

Query: 335 IGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERGM 156
           +  LCK G   +A  +  +++   I  ++  F  L+   CK  K+E A  +   + +  +
Sbjct: 459 LNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEEL 518

Query: 155 VPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNGY 3
            P++VTYN +I  +C  G++ +A  +   M     G  PD ITY +L+ G+
Sbjct: 519 QPDVVTYNIMIHEFCRGGQVVKANILFQKM--EKNGCTPDKITYATLIRGF 567


>ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545894|gb|EEF47397.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 594

 Score =  119 bits (298), Expect = 3e-25
 Identities = 54/113 (47%), Positives = 79/113 (69%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVER 162
           SLI  +CK   W ++  +L EM    I P+V+TF+  V  FCK+  V EA+++IN+M+ER
Sbjct: 354 SLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIER 413

Query: 161 GMVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNGY 3
           G+ PN+VTYNSL+DGYCL  +M EAR++ D M   ++G  PD+++YN L+ GY
Sbjct: 414 GLRPNVVTYNSLMDGYCLHSQMDEARKVFDIM--VNKGCAPDVLSYNILIKGY 464



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 52/148 (35%), Positives = 77/148 (52%), Gaps = 35/148 (23%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVER 162
           SLI  +C  G+W  A  + KEM +  + P+V+TF+ LV A CKE  V EA +V   M++ 
Sbjct: 284 SLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQI 343

Query: 161 GMVPNLVTYNSLIDG-----------------------------------YCLRGEMSEA 87
            M P++VTY+SLI G                                   +C +G +SEA
Sbjct: 344 AMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEA 403

Query: 86  REILDSMASTSRGLVPDIITYNSLLNGY 3
           + I++ M    RGL P+++TYNSL++GY
Sbjct: 404 QSIINLM--IERGLRPNVVTYNSLMDGY 429



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/113 (32%), Positives = 69/113 (61%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVER 162
           SL+   C   + D+A ++   M ++G +P+V+++  L+  +CK  +++EA+ + + M  +
Sbjct: 424 SLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHK 483

Query: 161 GMVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNGY 3
           G+ PN +T+ +LI G C  G    A+E+   M   S G  PD+ITY++LL+G+
Sbjct: 484 GLTPNSITHTTLISGLCQAGRPYAAKELFKKMG--SHGCPPDLITYSTLLSGF 534



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/111 (33%), Positives = 63/111 (56%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           +I SLCK    ++A  +   M   GISP V+T+ +L+   C   + ++A  +   M+E  
Sbjct: 250 IIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWN 309

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNG 6
           M P++VT++ L+D  C  G + EA  +   M   +  + PDI+TY+SL++G
Sbjct: 310 MKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIA--MEPDIVTYSSLIHG 358



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 36/111 (32%), Positives = 61/111 (54%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           LI   CK  R D+A ++  EM  +G++PN IT TTL+   C+  +   A+ +   M   G
Sbjct: 460 LIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHG 519

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNG 6
             P+L+TY++L+ G+C  G + EA  + +++  +   L P+ +    LL G
Sbjct: 520 CPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQ--LKPNHVICKILLGG 568



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/111 (31%), Positives = 63/111 (56%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           L+ +L ++  +D    + ++ME  G+S +V T T L+   C    V    +V+  + + G
Sbjct: 110 LLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLG 169

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNG 6
             P+++T+N+LI+G C+ G + EA E LD +   SRG  P + T+  ++NG
Sbjct: 170 FKPSIITFNTLINGLCIEGRIVEAMEQLDYI--MSRGYQPTVYTHTMIVNG 218



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/110 (30%), Positives = 61/110 (55%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           ++  LCK+G+   A   +K+M +    P V++++ ++ + CK   V EA  +   M   G
Sbjct: 215 IVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIG 274

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLN 9
           + P +VTYNSLI G C  G+  +A  +   M   +  + PD++T++ L++
Sbjct: 275 ISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWN--MKPDVVTFSILVD 322



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/103 (33%), Positives = 58/103 (56%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVER 162
           +LI  LC+ GR   A  + K+M   G  P++IT++TL+  FCK   ++EA A+   + + 
Sbjct: 494 TLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKS 553

Query: 161 GMVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDI 33
            + PN V    L+ G C  G++ +A+E+  S++     L PD+
Sbjct: 554 QLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEE--LQPDV 594



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/112 (34%), Positives = 56/112 (50%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVER 162
           +LI  LC  GR  +A   L  +   G  P V T T +V   CK  K   A   +  MVE 
Sbjct: 179 TLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVEL 238

Query: 161 GMVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNG 6
              P +V+Y+ +ID  C    ++EA ++   M S   G+ P ++TYNSL+ G
Sbjct: 239 DCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSI--GISPTVVTYNSLIYG 288


>ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
           gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity
           to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
           gi|332190806|gb|AEE28927.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  118 bits (296), Expect = 4e-25
 Identities = 54/113 (47%), Positives = 80/113 (70%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVER 162
           +LIG  C  GRWDD  ++L++M    ISPNV+TF+ L+ +F KE K+ EA+ ++  M++R
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362

Query: 161 GMVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNGY 3
           G+ PN +TYNSLIDG+C    + EA +++D M   S+G  PDI+T+N L+NGY
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLM--ISKGCDPDIMTFNILINGY 413



 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/112 (38%), Positives = 75/112 (66%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           LI S  K G+  +A ++LKEM   GI+PN IT+ +L+  FCKE ++EEA  ++++M+ +G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNGY 3
             P+++T+N LI+GYC    + +  E+   M  + RG++ + +TYN+L+ G+
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREM--SLRGVIANTVTYNTLVQGF 448



 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 42/112 (37%), Positives = 71/112 (63%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           +I  LCK G  D+AF +  EME +G   ++IT+ TL+  FC   + ++   ++  M++R 
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNGY 3
           + PN+VT++ LID +   G++ EA ++L  M    RG+ P+ ITYNSL++G+
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEM--MQRGIAPNTITYNSLIDGF 378



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/112 (34%), Positives = 68/112 (60%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVER 162
           SLI   CK  R ++A +M+  M  +G  P+++TF  L+  +CK  ++++   +   M  R
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432

Query: 161 GMVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNG 6
           G++ N VTYN+L+ G+C  G++  A+++   M   SR + PDI++Y  LL+G
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM--VSRRVRPDIVSYKILLDG 482



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 39/110 (35%), Positives = 64/110 (58%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           +I   C+  +   AF  + ++   G  P+ + F TL+   C EC+V EA  +++ MVE G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLN 9
             P L+T N+L++G CL G++S+A  ++D M  T  G  P+ +TY  +LN
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET--GFQPNEVTYGPVLN 236



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/111 (36%), Positives = 61/111 (54%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           LI   CK  R DD   + +EM   G+  N +T+ TLV  FC+  K+E A+ +   MV R 
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNG 6
           + P++V+Y  L+DG C  GE+ +A EI   +  +   L  DI  Y  +++G
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMEL--DIGIYMIIIHG 517



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/111 (30%), Positives = 66/111 (59%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           L  ++ K  +++    + K+ME +GI+ ++ T + ++  FC+  K+  A + +  +++ G
Sbjct: 94  LFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLG 153

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNG 6
             P+ V +N+L++G CL   +SEA E++D M     G  P +IT N+L+NG
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRM--VEMGHKPTLITLNTLVNG 202



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 35/113 (30%), Positives = 59/113 (52%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVER 162
           +L+  LC  G+  DA  ++  M + G  PN +T+  ++   CK  +   A  ++  M ER
Sbjct: 198 TLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER 257

Query: 161 GMVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNGY 3
            +  + V Y+ +IDG C  G +  A  + + M    +G   DIITYN+L+ G+
Sbjct: 258 NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM--EIKGFKADIITYNTLIGGF 308



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/112 (33%), Positives = 59/112 (52%)
 Frame = -2

Query: 341 SLIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVER 162
           +L+  LC   R  +A  ++  M + G  P +IT  TLV   C   KV +A  +I+ MVE 
Sbjct: 163 TLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET 222

Query: 161 GMVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNG 6
           G  PN VTY  +++  C  G+ + A E+L  M    R +  D + Y+ +++G
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKM--EERNIKLDAVKYSIIIDG 272



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/112 (25%), Positives = 64/112 (57%)
 Frame = -2

Query: 338 LIGSLCKLGRWDDAFRMLKEMEDEGISPNVITFTTLVVAFCKECKVEEAEAVINIMVERG 159
           ++  +CK G+   A  +L++ME+  I  + + ++ ++   CK+  ++ A  + N M  +G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293

Query: 158 MVPNLVTYNSLIDGYCLRGEMSEAREILDSMASTSRGLVPDIITYNSLLNGY 3
              +++TYN+LI G+C  G   +  ++L  M    R + P+++T++ L++ +
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDM--IKRKISPNVVTFSVLIDSF 343