BLASTX nr result

ID: Atractylodes22_contig00016252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016252
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550827.1| PREDICTED: uncharacterized protein LOC100791...    58   7e-07
ref|XP_003609288.1| Dynein light chain [Medicago truncatula] gi|...    57   2e-06
ref|XP_003609287.1| Dynein light chain [Medicago truncatula] gi|...    57   2e-06

>ref|XP_003550827.1| PREDICTED: uncharacterized protein LOC100791759 [Glycine max]
          Length = 210

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
 Frame = -3

Query: 506 NKKGVMYVYKLDTGNRHRDXXXXXXXXXXXXXXXXPISRSLGSFLRRSKTYRENTHHHYX 327
           +K+G MY+YK  TGN+ +                   SRS  + + R++ + +  H    
Sbjct: 8   HKRGFMYIYKGGTGNQRKKELEHGVGQEKKSN-----SRSWLNRISRTRIFNDG-HRDLD 61

Query: 326 XXXXXXXEMVQESSRKSVLAIEGGRRSVPAIEHGRKTVSAIAEGRKTVSGTGEL---GRK 156
                  E V+  +RKS+  ++ G  +   +E GRK+VS I       +  G +   GRK
Sbjct: 62  IGTRGEGEFVE--ARKSMSCLDLGTPAGGYVE-GRKSVSFIEAAASPAAAIGSIVEEGRK 118

Query: 155 VASGIEV-----GVVAGRRSAENRAEMVMINVAAVAALIHVKVLVTDMPAFMQVHA 3
             S IE      G+V  R+S  +     +  +++V A + VKVLV+DMP FMQVHA
Sbjct: 119 SVSHIEKNFAVEGMVEARKSVSH-----IETLSSVIAYLQVKVLVSDMPTFMQVHA 169


>ref|XP_003609288.1| Dynein light chain [Medicago truncatula]
           gi|355510343|gb|AES91485.1| Dynein light chain [Medicago
           truncatula]
          Length = 212

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 54/179 (30%), Positives = 78/179 (43%), Gaps = 11/179 (6%)
 Frame = -3

Query: 506 NKKGVMYVYKLDTGNRHRDXXXXXXXXXXXXXXXXPISRSLGSFLRRSKTYRENTHHHYX 327
           +KKG MY+YK+ TGN+ +                     S  S+L+R +    N    Y 
Sbjct: 8   HKKGFMYIYKIGTGNQRKKDSEQGVEKEKKL-------SSSRSWLQRLR----NPTRSYN 56

Query: 326 XXXXXXXEMVQESSRKSVLAIEG-------GRRSVPAIEHGR----KTVSAIAEGRKTVS 180
                    V+  +  S   +E        GR SV  IE       K    + EGRK+VS
Sbjct: 57  NKELNNGGFVEARNSTSCFELESIKGGYVEGRNSVSCIEASSSPAIKRGIIVEEGRKSVS 116

Query: 179 GTGELGRKVASGIEVGVVAGRRSAENRAEMVMINVAAVAALIHVKVLVTDMPAFMQVHA 3
              E   K+A+  +VG     R + +  E     +++V   + VKVLV+DMP+FMQVHA
Sbjct: 117 YVDE--TKLAAEEKVGKFVEARKSVSHIE----TLSSVIEKLQVKVLVSDMPSFMQVHA 169


>ref|XP_003609287.1| Dynein light chain [Medicago truncatula]
           gi|355510342|gb|AES91484.1| Dynein light chain [Medicago
           truncatula]
          Length = 245

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 54/179 (30%), Positives = 78/179 (43%), Gaps = 11/179 (6%)
 Frame = -3

Query: 506 NKKGVMYVYKLDTGNRHRDXXXXXXXXXXXXXXXXPISRSLGSFLRRSKTYRENTHHHYX 327
           +KKG MY+YK+ TGN+ +                     S  S+L+R +    N    Y 
Sbjct: 8   HKKGFMYIYKIGTGNQRKKDSEQGVEKEKKL-------SSSRSWLQRLR----NPTRSYN 56

Query: 326 XXXXXXXEMVQESSRKSVLAIEG-------GRRSVPAIEHGR----KTVSAIAEGRKTVS 180
                    V+  +  S   +E        GR SV  IE       K    + EGRK+VS
Sbjct: 57  NKELNNGGFVEARNSTSCFELESIKGGYVEGRNSVSCIEASSSPAIKRGIIVEEGRKSVS 116

Query: 179 GTGELGRKVASGIEVGVVAGRRSAENRAEMVMINVAAVAALIHVKVLVTDMPAFMQVHA 3
              E   K+A+  +VG     R + +  E     +++V   + VKVLV+DMP+FMQVHA
Sbjct: 117 YVDE--TKLAAEEKVGKFVEARKSVSHIE----TLSSVIEKLQVKVLVSDMPSFMQVHA 169


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