BLASTX nr result

ID: Atractylodes22_contig00016241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016241
         (1734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cy...   359   1e-96
ref|XP_003546769.1| PREDICTED: polyadenylate-binding protein, cy...   345   3e-92
emb|CAI84654.1| hypothetical protein [Nicotiana tabacum]              339   1e-90
ref|XP_002298913.1| predicted protein [Populus trichocarpa] gi|2...   339   2e-90
ref|NP_001240174.1| uncharacterized protein LOC100779109 [Glycin...   338   2e-90

>ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear
            [Vitis vinifera] gi|296088694|emb|CBI38144.3| unnamed
            protein product [Vitis vinifera]
          Length = 292

 Score =  359 bits (921), Expect = 1e-96
 Identities = 193/269 (71%), Positives = 208/269 (77%)
 Frame = +3

Query: 621  IVDMLSTLKLNPMAKEFFPSSYSPVDRNGDHPELTLNFFAPAYYTNSPGDGVEGYPXXXX 800
            IVDMLS LKLNP+AKEFFPSSYS       H  L    F+     +SP D    YP    
Sbjct: 35   IVDMLSNLKLNPLAKEFFPSSYS-------HDHLIPTDFSK----DSPNDA---YPNNRR 80

Query: 801  XXXXXXXXXXXXXXXAYRAQREDSIKRTVYVSDIDHNVTEERLAALFSAYGHVLDCRVCG 980
                           A+RAQREDSI+RTVYVSDID +VTEERLAALFS+ G V+DCRVCG
Sbjct: 81   RRNNYNQGRRRLSGRAFRAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVVDCRVCG 140

Query: 981  DPHSRLRFAFVEFADENSARAALNLCGIMLGFSQVRVLPSKTAILPVNPTFLPRSEDEKE 1160
            DPHS LRFAFVEFADE+ ARAALNL G MLG+  VRVLPSKTAILPVNPTFLPRSEDE+E
Sbjct: 141  DPHSVLRFAFVEFADEHGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDERE 200

Query: 1161 MCARTVYCTNIDKKVSQAEVKNFFEARCGEVSRIRLLGDHVHSTRIAFVEFVMAGCAIMA 1340
            MCARTVYCTNIDKKVSQAEVKNFFE  CGEVSR+RLLGDHVHSTRIAFVEF MA  AI+A
Sbjct: 201  MCARTVYCTNIDKKVSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAFVEFAMAESAIVA 260

Query: 1341 LDCCGQTLGTQPIRVSPSKTPVRPRVARS 1427
            L+C G  LGTQPIRVSPSKTPVRPRV R+
Sbjct: 261  LNCSGLVLGTQPIRVSPSKTPVRPRVPRA 289



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 38/103 (36%), Positives = 53/103 (51%)
 Frame = +3

Query: 1170 RTVYCTNIDKKVSQAEVKNFFEARCGEVSRIRLLGDHVHSTRIAFVEFVMAGCAIMALDC 1349
            RTVY ++ID+ V++  +   F + CG+V   R+ GD     R AFVEF     A  AL+ 
Sbjct: 107  RTVYVSDIDQHVTEERLAALFSS-CGQVVDCRVCGDPHSVLRFAFVEFADEHGARAALNL 165

Query: 1350 CGQTLGTQPIRVSPSKTPVRPRVARSLPTN*SDILVCIHEGVC 1478
             G  LG  P+RV PSKT + P     LP +  +  +C     C
Sbjct: 166  GGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCARTVYC 208


>ref|XP_003546769.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
            nuclear-like [Glycine max]
          Length = 296

 Score =  345 bits (884), Expect = 3e-92
 Identities = 182/271 (67%), Positives = 206/271 (76%), Gaps = 1/271 (0%)
 Frame = +3

Query: 615  QDIVDMLSTLKLNPMAKEFFPSSYSPVDRNGDHPELTLNFFAPAYYTNSPGDGV-EGYPX 791
            Q +VDM +  KLNP+AKEFFPSSYSP   N D+     N  +P ++  S      E +P 
Sbjct: 27   QKLVDMFT--KLNPLAKEFFPSSYSP---NHDNRFQGFNQLSPTHFLVSTKPSADENFPN 81

Query: 792  XXXXXXXXXXXXXXXXXXAYRAQREDSIKRTVYVSDIDHNVTEERLAALFSAYGHVLDCR 971
                              + +AQREDSI+RTVYVS+ID +VTEERLAALFS+ G V+DCR
Sbjct: 82   NRRRRNSFNQGRRKVSGRSLKAQREDSIRRTVYVSEIDQHVTEERLAALFSSCGQVIDCR 141

Query: 972  VCGDPHSRLRFAFVEFADENSARAALNLCGIMLGFSQVRVLPSKTAILPVNPTFLPRSED 1151
            +CGDPHS LRFAFVEFADE  AR ALNL G +LG+  VRVLPSKTAILPVNPTFLPRS+D
Sbjct: 142  ICGDPHSVLRFAFVEFADEYGARTALNLGGTVLGYYPVRVLPSKTAILPVNPTFLPRSDD 201

Query: 1152 EKEMCARTVYCTNIDKKVSQAEVKNFFEARCGEVSRIRLLGDHVHSTRIAFVEFVMAGCA 1331
            E+EMCARTVYCTNIDKKVSQAEVKNFFE+ CGEV R+RLLGDHVHSTRIAFVEF MA  A
Sbjct: 202  EREMCARTVYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGDHVHSTRIAFVEFAMAESA 261

Query: 1332 IMALDCCGQTLGTQPIRVSPSKTPVRPRVAR 1424
            I+AL+C G  LGTQPIRVSPSKTPVRPRV R
Sbjct: 262  IIALNCSGMLLGTQPIRVSPSKTPVRPRVTR 292



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 38/103 (36%), Positives = 52/103 (50%)
 Frame = +3

Query: 1170 RTVYCTNIDKKVSQAEVKNFFEARCGEVSRIRLLGDHVHSTRIAFVEFVMAGCAIMALDC 1349
            RTVY + ID+ V++  +   F + CG+V   R+ GD     R AFVEF     A  AL+ 
Sbjct: 111  RTVYVSEIDQHVTEERLAALFSS-CGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNL 169

Query: 1350 CGQTLGTQPIRVSPSKTPVRPRVARSLPTN*SDILVCIHEGVC 1478
             G  LG  P+RV PSKT + P     LP +  +  +C     C
Sbjct: 170  GGTVLGYYPVRVLPSKTAILPVNPTFLPRSDDEREMCARTVYC 212


>emb|CAI84654.1| hypothetical protein [Nicotiana tabacum]
          Length = 201

 Score =  339 bits (870), Expect = 1e-90
 Identities = 163/195 (83%), Positives = 185/195 (94%)
 Frame = +3

Query: 846  AYRAQREDSIKRTVYVSDIDHNVTEERLAALFSAYGHVLDCRVCGDPHSRLRFAFVEFAD 1025
            AY+AQREDSI+RTVYV++ID+NVTEE+LAALFSAYG V+DCR+CGDPHSRLRFAFVEFAD
Sbjct: 5    AYKAQREDSIRRTVYVAEIDNNVTEEQLAALFSAYGQVVDCRICGDPHSRLRFAFVEFAD 64

Query: 1026 ENSARAALNLCGIMLGFSQVRVLPSKTAILPVNPTFLPRSEDEKEMCARTVYCTNIDKKV 1205
            E SARAAL+LCG +LGFS ++VLPSKTAILPVNPTFLPRSEDE+EMCARTVYCTNIDKKV
Sbjct: 65   EYSARAALSLCGTILGFSPLKVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNIDKKV 124

Query: 1206 SQAEVKNFFEARCGEVSRIRLLGDHVHSTRIAFVEFVMAGCAIMALDCCGQTLGTQPIRV 1385
            +QA+VKNFFE RCGEVSR+RLLGDHVHSTRIAFVEFVMA  AI+ALDCCG+ LG+Q IRV
Sbjct: 125  TQADVKNFFETRCGEVSRLRLLGDHVHSTRIAFVEFVMAESAILALDCCGEILGSQRIRV 184

Query: 1386 SPSKTPVRPRVARSL 1430
            SPSKTPVRPR+ R++
Sbjct: 185  SPSKTPVRPRLPRAM 199



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 38/103 (36%), Positives = 50/103 (48%)
 Frame = +3

Query: 1170 RTVYCTNIDKKVSQAEVKNFFEARCGEVSRIRLLGDHVHSTRIAFVEFVMAGCAIMALDC 1349
            RTVY   ID  V++ ++   F A  G+V   R+ GD     R AFVEF     A  AL  
Sbjct: 16   RTVYVAEIDNNVTEEQLAALFSAY-GQVVDCRICGDPHSRLRFAFVEFADEYSARAALSL 74

Query: 1350 CGQTLGTQPIRVSPSKTPVRPRVARSLPTN*SDILVCIHEGVC 1478
            CG  LG  P++V PSKT + P     LP +  +  +C     C
Sbjct: 75   CGTILGFSPLKVLPSKTAILPVNPTFLPRSEDEREMCARTVYC 117


>ref|XP_002298913.1| predicted protein [Populus trichocarpa] gi|222846171|gb|EEE83718.1|
            predicted protein [Populus trichocarpa]
          Length = 307

 Score =  339 bits (869), Expect = 2e-90
 Identities = 197/332 (59%), Positives = 224/332 (67%)
 Frame = +3

Query: 429  MAAGPEISDETATIAASPDVAHQSSLKTAVATNESENINVANPDDDGXXXXXXXXXXXXX 608
            MAA  EI+ E A           +S  T  A N+++N N  N D +              
Sbjct: 1    MAAVAEITSEAAV----------ASNNTTTAANKNDNNN--NLDSE-----TKPTSESEF 43

Query: 609  XXQDIVDMLSTLKLNPMAKEFFPSSYSPVDRNGDHPELTLNFFAPAYYTNSPGDGVEGYP 788
              Q +VDM +  KLNP+AKEFFPSSYS  + N    EL  N FA     ++     + +P
Sbjct: 44   TVQKLVDMFT--KLNPLAKEFFPSSYSKNNPN----ELHFNNFAVPVKQSAN----DNFP 93

Query: 789  XXXXXXXXXXXXXXXXXXXAYRAQREDSIKRTVYVSDIDHNVTEERLAALFSAYGHVLDC 968
                               AYRAQ+EDSI+RTVYVSDID +VTEERLA LFS  G V+DC
Sbjct: 94   KRKRNNFNQGRRKLNGR--AYRAQQEDSIRRTVYVSDIDQHVTEERLAGLFSGCGQVVDC 151

Query: 969  RVCGDPHSRLRFAFVEFADENSARAALNLCGIMLGFSQVRVLPSKTAILPVNPTFLPRSE 1148
            RVCGDPHS LRFAFVEFADE  ARAALNL G MLG+  VRVLPSKTAILPVNPTFLPRSE
Sbjct: 152  RVCGDPHSVLRFAFVEFADEQGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSE 211

Query: 1149 DEKEMCARTVYCTNIDKKVSQAEVKNFFEARCGEVSRIRLLGDHVHSTRIAFVEFVMAGC 1328
            DE+EMC RTVYCTNIDKKVSQ EVKNFFE+ CGEV+R+RLLGD VHSTRIAFVEF MA  
Sbjct: 212  DEREMCTRTVYCTNIDKKVSQVEVKNFFESICGEVTRLRLLGDQVHSTRIAFVEFAMAES 271

Query: 1329 AIMALDCCGQTLGTQPIRVSPSKTPVRPRVAR 1424
            AI+AL+C G  LG+QP+RVSPSKTPVRPRV R
Sbjct: 272  AIVALNCSGMALGSQPVRVSPSKTPVRPRVTR 303



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 38/109 (34%), Positives = 55/109 (50%)
 Frame = +3

Query: 1152 EKEMCARTVYCTNIDKKVSQAEVKNFFEARCGEVSRIRLLGDHVHSTRIAFVEFVMAGCA 1331
            +++   RTVY ++ID+ V++  +   F   CG+V   R+ GD     R AFVEF     A
Sbjct: 116  QEDSIRRTVYVSDIDQHVTEERLAGLFSG-CGQVVDCRVCGDPHSVLRFAFVEFADEQGA 174

Query: 1332 IMALDCCGQTLGTQPIRVSPSKTPVRPRVARSLPTN*SDILVCIHEGVC 1478
              AL+  G  LG  P+RV PSKT + P     LP +  +  +C     C
Sbjct: 175  RAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTVYC 223


>ref|NP_001240174.1| uncharacterized protein LOC100779109 [Glycine max]
            gi|255639113|gb|ACU19856.1| unknown [Glycine max]
          Length = 296

 Score =  338 bits (868), Expect = 2e-90
 Identities = 180/271 (66%), Positives = 203/271 (74%), Gaps = 1/271 (0%)
 Frame = +3

Query: 615  QDIVDMLSTLKLNPMAKEFFPSSYSPVDRNGDHPELTLNFFAPAYYTNSPGDGV-EGYPX 791
            Q +VDM +  KLNP+AKEFFPSSYSP   N DH     N  +P  +  S      E +  
Sbjct: 27   QKLVDMFT--KLNPLAKEFFPSSYSP---NHDHGFQGFNQLSPTQFLVSTKPSANENFLN 81

Query: 792  XXXXXXXXXXXXXXXXXXAYRAQREDSIKRTVYVSDIDHNVTEERLAALFSAYGHVLDCR 971
                              + +AQREDSI+RTVYVS+ID +VTEERLAALFS+ G V+DCR
Sbjct: 82   SRRRRNSFNQGRRRVSGRSLKAQREDSIRRTVYVSEIDQHVTEERLAALFSSCGQVIDCR 141

Query: 972  VCGDPHSRLRFAFVEFADENSARAALNLCGIMLGFSQVRVLPSKTAILPVNPTFLPRSED 1151
            +CGDPHS LRFAFVEFADE  AR ALNL G +LG+  VRVLPSKTAILPVNPTFLPRS+D
Sbjct: 142  ICGDPHSVLRFAFVEFADEYGARTALNLGGTVLGYYPVRVLPSKTAILPVNPTFLPRSDD 201

Query: 1152 EKEMCARTVYCTNIDKKVSQAEVKNFFEARCGEVSRIRLLGDHVHSTRIAFVEFVMAGCA 1331
            E+EMCART+YCTNIDKKVSQAEVKNFFE+ CGEV R+RLLGD VHSTRIAFVEF MA  A
Sbjct: 202  EREMCARTIYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGDQVHSTRIAFVEFAMAESA 261

Query: 1332 IMALDCCGQTLGTQPIRVSPSKTPVRPRVAR 1424
            I+AL+C G  LGTQPIRVSPSKTPVRPRV R
Sbjct: 262  IIALNCSGMLLGTQPIRVSPSKTPVRPRVPR 292



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 38/103 (36%), Positives = 52/103 (50%)
 Frame = +3

Query: 1170 RTVYCTNIDKKVSQAEVKNFFEARCGEVSRIRLLGDHVHSTRIAFVEFVMAGCAIMALDC 1349
            RTVY + ID+ V++  +   F + CG+V   R+ GD     R AFVEF     A  AL+ 
Sbjct: 111  RTVYVSEIDQHVTEERLAALFSS-CGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNL 169

Query: 1350 CGQTLGTQPIRVSPSKTPVRPRVARSLPTN*SDILVCIHEGVC 1478
             G  LG  P+RV PSKT + P     LP +  +  +C     C
Sbjct: 170  GGTVLGYYPVRVLPSKTAILPVNPTFLPRSDDEREMCARTIYC 212


Top