BLASTX nr result

ID: Atractylodes22_contig00016233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016233
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146303.1| PREDICTED: F-box protein PP2-B10-like [Cucum...    65   6e-09
ref|XP_003556444.1| PREDICTED: F-box protein PP2-B1-like [Glycin...    65   1e-08
ref|XP_002513764.1| conserved hypothetical protein [Ricinus comm...    65   1e-08
ref|XP_002308717.1| f-box family protein [Populus trichocarpa] g...    64   2e-08
emb|CBI38323.3| unnamed protein product [Vitis vinifera]               63   4e-08

>ref|XP_004146303.1| PREDICTED: F-box protein PP2-B10-like [Cucumis sativus]
          Length = 299

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 44/128 (34%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
 Frame = +3

Query: 6   WEMKLPRDWRVIIHM-----LNIPRAIYRVKKELFSYLHKGILFDDRNKFFSINN-DGKK 167
           W+  LP DW ++I       LN        K   FS     ++ DD NK FS++   GKK
Sbjct: 53  WDSFLPTDWEILISRRKPSNLNFDPISSSKKGIFFSLCDTPLIIDDGNKSFSLDKCSGKK 112

Query: 168 CLSISARRFLDA-----RYTEWALHRDIRFSSVAKFFNGKIHDIKCQIKTSMLSPGTMYA 332
           C+ + AR           Y  W  H + RF+ VA   N    +IK ++   MLSP T YA
Sbjct: 113 CIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKLSCKMLSPATTYA 172

Query: 333 ASLVFTYD 356
           A  VF  D
Sbjct: 173 AYFVFKMD 180


>ref|XP_003556444.1| PREDICTED: F-box protein PP2-B1-like [Glycine max]
          Length = 303

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 48/124 (38%), Positives = 62/124 (50%), Gaps = 10/124 (8%)
 Frame = +3

Query: 6   WEMKLPRDWRVIIHM---LNIPRAIYRVKKELFSYL-HKGILFDDRNKFFSINND-GKKC 170
           W   LP D+  I+     L++P      KK+LF YL  K +L DD  K F ++   GKKC
Sbjct: 49  WNKFLPSDFHTILSQSSSLSLPS-----KKDLFLYLCQKPLLIDDGKKSFQLDKVYGKKC 103

Query: 171 LSISARRFL-----DARYTEWALHRDIRFSSVAKFFNGKIHDIKCQIKTSMLSPGTMYAA 335
             +SAR          RY  W    D RFS VA+  +    +I+  I T MLSP T+Y A
Sbjct: 104 YMLSARNLFIVWGDTPRYWRWTSLPDARFSEVAELRSVCWLEIRGWINTGMLSPETLYGA 163

Query: 336 SLVF 347
            LVF
Sbjct: 164 YLVF 167


>ref|XP_002513764.1| conserved hypothetical protein [Ricinus communis]
           gi|223546850|gb|EEF48347.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 301

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 47/123 (38%), Positives = 63/123 (51%), Gaps = 9/123 (7%)
 Frame = +3

Query: 6   WEMKLPRDWRVIIHMLNIPRAIYRV--KKELF-SYLHKGILFDDRNKFFSINN-DGKKCL 173
           WE  LP+D+  II   + P  +     KK LF S   K I+ D+  K FS++  +GKKC 
Sbjct: 48  WESFLPQDYNSIISQSSHPSLLSSCSSKKHLFLSLCQKPIIIDNGKKSFSLDKRNGKKCY 107

Query: 174 SISARRFLDA-----RYTEWALHRDIRFSSVAKFFNGKIHDIKCQIKTSMLSPGTMYAAS 338
            +SAR    +      Y  W    D RF  VA+  +    +I   I TS+LSP TMY+A 
Sbjct: 108 MLSARDLKISWGGTPTYWRWISDPDSRFGEVAELISVCWLEISGTISTSLLSPSTMYSAY 167

Query: 339 LVF 347
           LVF
Sbjct: 168 LVF 170


>ref|XP_002308717.1| f-box family protein [Populus trichocarpa]
           gi|222854693|gb|EEE92240.1| f-box family protein
           [Populus trichocarpa]
          Length = 292

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 51/139 (36%), Positives = 67/139 (48%), Gaps = 16/139 (11%)
 Frame = +3

Query: 6   WEMKLPRDWRVIIHMLN--IPRAIYRVKKELFSYL-HKGILFDDRNKFFS-INNDGKKCL 173
           WE  LPRD++ II   +  +  +    KKEL+  L  K I+ DD  K FS +   GKKC 
Sbjct: 43  WERFLPRDYQSIIFTSDSYVLLSSLSSKKELYLRLCEKPIIIDDGKKSFSLVKKSGKKCY 102

Query: 174 SISARRFL-----DARYTEWALHRDIRFSSVAKFFNGKIHDIKCQIKTSMLSPGTMYAAS 338
            +SAR  +        Y  W      RF  VA+       +I  +I  +MLSP T+YAA 
Sbjct: 103 MLSARDLMIVWGDTPTYWRWNSDSSSRFGEVAELIGVCWLEICGKINATMLSPATLYAAY 162

Query: 339 LVFT-------YDWQPNEV 374
           LVF         D+QP EV
Sbjct: 163 LVFKPKEGAYGLDYQPVEV 181


>emb|CBI38323.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 66/219 (30%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
 Frame = +3

Query: 6   WEMKLPRDWRVIIHMLN--IPRAIYRVKKELFSYL-HKGILFDDRNKFFSINND-GKKCL 173
           WE  LP D+R II   +    R  +  KKELF  L +  +L D   K F ++ + GKKC 
Sbjct: 94  WETFLPADYREIIGRSSESSARQDFSSKKELFFRLCNSPLLIDGGKKSFWLDKESGKKCY 153

Query: 174 SISARRFL-----DARYTEWALHRDIRFSSVAKFFNGKIHDIKCQIKTSMLSPGTMYAAS 338
            I+AR          RY  W      RF+ VA         IK ++ T MLSP T YAA 
Sbjct: 154 MIAARELTIIWSETPRYWTWISPPQSRFTEVANLKIVWWFVIKGKMNTCMLSPCTNYAAY 213

Query: 339 LVFTYDWQPNEVPQRFRSITFKWKTEELNVSSIQVAE---------------LSVDNWYV 473
           L+F    Q N++   F     +     + V+  + A+                 +D WY 
Sbjct: 214 LIF----QRNDIFDGFEDNPIE---SSIGVTGGETAKKVIYLDPEHDISPNPTRIDGWYE 266

Query: 474 MKMWHFINHVPEA-EFDIVIEELSSFEDPYKSDILVLGI 587
           +++  F N   E+ E ++ I E+++F    KS +L+ GI
Sbjct: 267 VELGEFFNEGRESVELEMSIMEVNTFIG--KSGLLIEGI 303


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