BLASTX nr result

ID: Atractylodes22_contig00016211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016211
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD08452.1| TATA box-binding protein associated factor 10 [F...   100   2e-19
ref|XP_004138687.1| PREDICTED: transcription initiation factor T...    97   1e-18
ref|XP_002267115.1| PREDICTED: transcription initiation factor T...    96   2e-18
ref|XP_002266754.1| PREDICTED: transcription initiation factor T...    96   2e-18
ref|XP_002324360.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18

>dbj|BAD08452.1| TATA box-binding protein associated factor 10 [Flaveria trinervia]
          Length = 136

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/69 (76%), Positives = 55/69 (79%)
 Frame = -3

Query: 209 VEHYLAKSGFQCPDVRLIRLVAVAAQKFVSDVATDALQQCKARQAAVVXXXXXXXXXXXR 30
           VEHYLAKSGFQCPDVRL RLVAVAAQKFVSD+A DALQ CKARQAAVV           R
Sbjct: 37  VEHYLAKSGFQCPDVRLTRLVAVAAQKFVSDIAIDALQHCKARQAAVVRDKKEKQQRDKR 96

Query: 29  LIMNMDDLS 3
           LIMNM+DLS
Sbjct: 97  LIMNMEDLS 105


>ref|XP_004138687.1| PREDICTED: transcription initiation factor TFIID subunit 10-like
           [Cucumis sativus] gi|449493281|ref|XP_004159243.1|
           PREDICTED: transcription initiation factor TFIID subunit
           10-like [Cucumis sativus]
          Length = 136

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/69 (73%), Positives = 54/69 (78%)
 Frame = -3

Query: 209 VEHYLAKSGFQCPDVRLIRLVAVAAQKFVSDVATDALQQCKARQAAVVXXXXXXXXXXXR 30
           VEHYL KSGFQCPDVRLIRLVAVA QKFV+DVA+DALQ CKARQAAVV           R
Sbjct: 37  VEHYLGKSGFQCPDVRLIRLVAVATQKFVADVASDALQHCKARQAAVVKDKRDKQQKDKR 96

Query: 29  LIMNMDDLS 3
           LI+ MDDLS
Sbjct: 97  LILTMDDLS 105


>ref|XP_002267115.1| PREDICTED: transcription initiation factor TFIID subunit 10 [Vitis
           vinifera] gi|302143599|emb|CBI22352.3| unnamed protein
           product [Vitis vinifera]
          Length = 136

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/69 (72%), Positives = 56/69 (81%)
 Frame = -3

Query: 209 VEHYLAKSGFQCPDVRLIRLVAVAAQKFVSDVATDALQQCKARQAAVVXXXXXXXXXXXR 30
           VEHYLAKSGFQCPDVRLIRLVAVA QKFV++VA+DALQQCKARQ+AVV           R
Sbjct: 37  VEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVASDALQQCKARQSAVVKDKRDKQQKDKR 96

Query: 29  LIMNMDDLS 3
           LI+ M+DLS
Sbjct: 97  LILTMEDLS 105


>ref|XP_002266754.1| PREDICTED: transcription initiation factor TFIID subunit 10 [Vitis
           vinifera] gi|302143597|emb|CBI22350.3| unnamed protein
           product [Vitis vinifera]
          Length = 136

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/69 (72%), Positives = 56/69 (81%)
 Frame = -3

Query: 209 VEHYLAKSGFQCPDVRLIRLVAVAAQKFVSDVATDALQQCKARQAAVVXXXXXXXXXXXR 30
           VEHYLAKSGFQCPDVRLIRLVAVA QKFV++VA+DALQQCKARQ+AVV           R
Sbjct: 37  VEHYLAKSGFQCPDVRLIRLVAVATQKFVTEVASDALQQCKARQSAVVKDKRDKQQKDKR 96

Query: 29  LIMNMDDLS 3
           LI+ M+DLS
Sbjct: 97  LILTMEDLS 105


>ref|XP_002324360.1| predicted protein [Populus trichocarpa] gi|222865794|gb|EEF02925.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 50/69 (72%), Positives = 54/69 (78%)
 Frame = -3

Query: 209 VEHYLAKSGFQCPDVRLIRLVAVAAQKFVSDVATDALQQCKARQAAVVXXXXXXXXXXXR 30
           VEHYLAKSGFQCPDVRL+RLVAVA QKFV+DVATDALQQCKAR A VV           R
Sbjct: 45  VEHYLAKSGFQCPDVRLVRLVAVATQKFVADVATDALQQCKARPAPVVKDKRDKQQKEKR 104

Query: 29  LIMNMDDLS 3
           LI+ M+DLS
Sbjct: 105 LILTMEDLS 113


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