BLASTX nr result

ID: Atractylodes22_contig00016198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016198
         (1098 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativu...   360   4e-97
ref|XP_002315762.1| PAF1 complex component [Populus trichocarpa]...   350   5e-94
ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]     348   1e-93
ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]        346   5e-93
ref|XP_002517109.1| conserved hypothetical protein [Ricinus comm...   345   1e-92

>ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativus]
            gi|449513423|ref|XP_004164322.1| PREDICTED:
            parafibromin-like [Cucumis sativus]
          Length = 407

 Score =  360 bits (923), Expect = 4e-97
 Identities = 190/251 (75%), Positives = 210/251 (83%), Gaps = 6/251 (2%)
 Frame = -3

Query: 1060 MDLIRAIERPLKDRETILECRHRDFYSVLTAATKRDEERQRLGSQQRKDGLVAKNRI--- 890
            M +IRAIERPLKDRE++LEC++R+FY+VL  +TKR+EERQRL SQQRKDGLVAK+R+   
Sbjct: 152  MTMIRAIERPLKDRESLLECKNRNFYNVLVMSTKREEERQRLESQQRKDGLVAKSRLMGS 211

Query: 889  -DRGFXXXXXXXXXGT-PRPKMHLKGSKIGDGVPIILVPSASQTLITIYNVKEFLEDGVF 716
             DRG             P+PKMHLKG KIG+GVPIILVPSA QTLITIYNVKEFLEDGVF
Sbjct: 212  DDRGLVGYGDDLGYDANPKPKMHLKGGKIGEGVPIILVPSAFQTLITIYNVKEFLEDGVF 271

Query: 715  IPTDVKMKQMKGPKPECVTVLKKFS-SRDRVVTAYEVRDKPSALKSEEWGRVVAVFVLGK 539
            IPTDVK+KQMKG +P+CVTV KKFS  RDRVVTAYEVRDKPSALKSE+W RVVAVFVLGK
Sbjct: 272  IPTDVKVKQMKGARPDCVTVQKKFSRDRDRVVTAYEVRDKPSALKSEDWDRVVAVFVLGK 331

Query: 538  XXXXXXXXXXXXHVEIFNKILGFYMRFEDDSVESAKIVKQWNVKIISISKNKRHQDRAAA 359
                        HVEIFNKI+GFYMRFEDDS+ESAK VKQWNVKIISISKNKRHQDRAAA
Sbjct: 332  -EWQFKDWPFKDHVEIFNKIIGFYMRFEDDSLESAKNVKQWNVKIISISKNKRHQDRAAA 390

Query: 358  LDVWDRLEEFV 326
            L+VWDRLEEFV
Sbjct: 391  LEVWDRLEEFV 401


>ref|XP_002315762.1| PAF1 complex component [Populus trichocarpa]
            gi|222864802|gb|EEF01933.1| PAF1 complex component
            [Populus trichocarpa]
          Length = 405

 Score =  350 bits (897), Expect = 5e-94
 Identities = 184/254 (72%), Positives = 208/254 (81%), Gaps = 6/254 (2%)
 Frame = -3

Query: 1069 ENPMDLIRAIERPLKDRETILECRHRDFYSVLTAATKRDEERQRLGSQQRKDGLVAKNRI 890
            EN + LI A ERPLKDRE++LEC++RDFY VL A+T+R+EER +  SQQRKDGLVAK+R+
Sbjct: 147  ENHVSLIYANERPLKDRESLLECKNRDFYGVLVASTRREEERHKFESQQRKDGLVAKSRL 206

Query: 889  ----DRGFXXXXXXXXXGTP-RPKMHLKGSKIGDGVPIILVPSASQTLITIYNVKEFLED 725
                +RG           +  +PKMH KG KIG+GVPIILVPSA QTLITIYNVKEFLED
Sbjct: 207  MGTDERGIGYGGDELGYDSAAKPKMHSKGGKIGEGVPIILVPSAFQTLITIYNVKEFLED 266

Query: 724  GVFIPTDVKMKQMKGPKPECVTVLKKFSS-RDRVVTAYEVRDKPSALKSEEWGRVVAVFV 548
            G+FIPTDVK KQMKGPKPECVTV KKFS+ R+RV+TAYEVRDKPSALK ++W RVVAVFV
Sbjct: 267  GIFIPTDVKAKQMKGPKPECVTVQKKFSTDRNRVMTAYEVRDKPSALKGDDWDRVVAVFV 326

Query: 547  LGKXXXXXXXXXXXXHVEIFNKILGFYMRFEDDSVESAKIVKQWNVKIISISKNKRHQDR 368
            LGK            HVEIFNKI+GF+MRFEDDSVESAKIVKQWNVKIISISKNKRHQDR
Sbjct: 327  LGK-EWQFKDWPFKDHVEIFNKIIGFFMRFEDDSVESAKIVKQWNVKIISISKNKRHQDR 385

Query: 367  AAALDVWDRLEEFV 326
            AAAL+VWDRLEEFV
Sbjct: 386  AAALEVWDRLEEFV 399


>ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]
          Length = 413

 Score =  348 bits (894), Expect = 1e-93
 Identities = 188/252 (74%), Positives = 207/252 (82%), Gaps = 7/252 (2%)
 Frame = -3

Query: 1060 MDLIRAIERPLKDRETILECRHRDFYSVLTAATKRDEERQRLGSQQRKDGLVAKNRI--- 890
            + +IRA ERPLKDRE++LEC+ RDFYSVL A+T+R+EER RL S QRKDGLVAK+R+   
Sbjct: 158  ISMIRASERPLKDRESLLECKQRDFYSVLMASTRREEERHRLESHQRKDGLVAKSRLMGA 217

Query: 889  -DRG---FXXXXXXXXXGTPRPKMHLKGSKIGDGVPIILVPSASQTLITIYNVKEFLEDG 722
             +RG   +         GTP+PKM L  SKIG+GVPIILVPSA QTLITIYNVKEFLEDG
Sbjct: 218  DERGLGFWKDGDELGYDGTPKPKMLLNRSKIGEGVPIILVPSAFQTLITIYNVKEFLEDG 277

Query: 721  VFIPTDVKMKQMKGPKPECVTVLKKFSSRDRVVTAYEVRDKPSALKSEEWGRVVAVFVLG 542
            VFIPTDVK KQMKG KP+CVTV KKFS RDRVV AYEVRDKPSALK+E+W RVVAVFVLG
Sbjct: 278  VFIPTDVKAKQMKGAKPDCVTVQKKFS-RDRVVMAYEVRDKPSALKTEDWDRVVAVFVLG 336

Query: 541  KXXXXXXXXXXXXHVEIFNKILGFYMRFEDDSVESAKIVKQWNVKIISISKNKRHQDRAA 362
            K            HVEIFNKI+GFYMRFEDDSVESAKIVKQWNVKIISISKNKRHQDRAA
Sbjct: 337  KEWQFKDWPFKD-HVEIFNKIIGFYMRFEDDSVESAKIVKQWNVKIISISKNKRHQDRAA 395

Query: 361  ALDVWDRLEEFV 326
            AL+VWDRLEEFV
Sbjct: 396  ALEVWDRLEEFV 407


>ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]
          Length = 389

 Score =  346 bits (888), Expect = 5e-93
 Identities = 179/250 (71%), Positives = 207/250 (82%), Gaps = 5/250 (2%)
 Frame = -3

Query: 1060 MDLIRAIERPLKDRETILECRHRDFYSVLTAATKRDEERQRLGSQQRKDGLVAKNRI--- 890
            + +IR+ E+PLKDR+++LEC++RDFYSVL +ATKR+EERQR+ S QRKDGLVAK+R+   
Sbjct: 136  ISMIRSAEKPLKDRQSLLECKNRDFYSVLVSATKREEERQRMESHQRKDGLVAKSRLMGS 195

Query: 889  -DRGFXXXXXXXXXG-TPRPKMHLKGSKIGDGVPIILVPSASQTLITIYNVKEFLEDGVF 716
             DRG            TP+PKMHLKG+KIG+GVPIILVPSA QTLITIYNVKEFLEDGV+
Sbjct: 196  DDRGLGFSDDMGGYDPTPKPKMHLKGTKIGEGVPIILVPSAFQTLITIYNVKEFLEDGVY 255

Query: 715  IPTDVKMKQMKGPKPECVTVLKKFSSRDRVVTAYEVRDKPSALKSEEWGRVVAVFVLGKX 536
            IPTDVK+KQMKG +P+CVTV KK  SRDRVVTAYEVRDKPS LK ++W RVVAVFVLGK 
Sbjct: 256  IPTDVKVKQMKGARPDCVTVQKKL-SRDRVVTAYEVRDKPSTLKPDDWDRVVAVFVLGK- 313

Query: 535  XXXXXXXXXXXHVEIFNKILGFYMRFEDDSVESAKIVKQWNVKIISISKNKRHQDRAAAL 356
                       HVEIFNKI+GF+MRFEDDS+ES K VKQWNVKIISISKNKRHQDRAAAL
Sbjct: 314  EWQFKDWPFKDHVEIFNKIIGFFMRFEDDSLESCKTVKQWNVKIISISKNKRHQDRAAAL 373

Query: 355  DVWDRLEEFV 326
            DVW+RLE+FV
Sbjct: 374  DVWERLEDFV 383


>ref|XP_002517109.1| conserved hypothetical protein [Ricinus communis]
            gi|223543744|gb|EEF45272.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 409

 Score =  345 bits (885), Expect = 1e-92
 Identities = 178/253 (70%), Positives = 208/253 (82%), Gaps = 5/253 (1%)
 Frame = -3

Query: 1069 ENPMDLIRAIERPLKDRETILECRHRDFYSVLTAATKRDEERQRLGSQQRKDGLVAKNRI 890
            +N + +I ++ERP+KDRE +LEC+ +DFYSVL A+T+R+EERQR+ SQQRKDGLVAK+R+
Sbjct: 152  DNLISIIYSMERPIKDREALLECKTKDFYSVLVASTRREEERQRIESQQRKDGLVAKSRL 211

Query: 889  ----DRGFXXXXXXXXXGTPRPKMHLKGSKIGDGVPIILVPSASQTLITIYNVKEFLEDG 722
                DRG+          +    +HLKG K G+GVPIILVPSA QTLITIYNVKEFLEDG
Sbjct: 212  MGSEDRGYGGDEMGYDANSKPKMLHLKGGKFGEGVPIILVPSAFQTLITIYNVKEFLEDG 271

Query: 721  VFIPTDVKMKQMKGPKPECVTVLKKFSS-RDRVVTAYEVRDKPSALKSEEWGRVVAVFVL 545
            V+IPTDVK+KQMKG KP+CVTV KKFS+ R+RV+TAYEVRDKPSALK+E+W RVVAVFVL
Sbjct: 272  VYIPTDVKVKQMKGAKPDCVTVQKKFSTDRNRVMTAYEVRDKPSALKAEDWDRVVAVFVL 331

Query: 544  GKXXXXXXXXXXXXHVEIFNKILGFYMRFEDDSVESAKIVKQWNVKIISISKNKRHQDRA 365
            GK            HVEIFNKI+GF+MRFEDDSVESAK VKQWNVKIISISKNKRHQDRA
Sbjct: 332  GK-EWQFKDWPFKDHVEIFNKIIGFFMRFEDDSVESAKTVKQWNVKIISISKNKRHQDRA 390

Query: 364  AALDVWDRLEEFV 326
            AAL+VWDRLEEFV
Sbjct: 391  AALEVWDRLEEFV 403


Top