BLASTX nr result

ID: Atractylodes22_contig00016187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016187
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141259.1| PREDICTED: protein DCL, chloroplastic-like [...   102   3e-20
ref|NP_001233874.1| protein DCL, chloroplastic [Solanum lycopers...   101   5e-20
ref|NP_001031151.1| uncharacterized protein [Arabidopsis thalian...    99   3e-19
ref|NP_683398.1| uncharacterized protein [Arabidopsis thaliana] ...    99   3e-19
ref|XP_002894020.1| hypothetical protein ARALYDRAFT_473852 [Arab...    99   3e-19

>ref|XP_004141259.1| PREDICTED: protein DCL, chloroplastic-like [Cucumis sativus]
           gi|449519344|ref|XP_004166695.1| PREDICTED: protein DCL,
           chloroplastic-like [Cucumis sativus]
          Length = 225

 Score =  102 bits (254), Expect = 3e-20
 Identities = 46/49 (93%), Positives = 48/49 (97%)
 Frame = -3

Query: 274 SSRCLFIVRKDGEMVDFSYWKCIKGLIKKNYPLYADSFILRHFRRRRHN 128
           SSRCLFIVRKDGEMVDFSYWKCIKGLI+KNYPLYA+SFILRHFRRRR N
Sbjct: 174 SSRCLFIVRKDGEMVDFSYWKCIKGLIRKNYPLYAESFILRHFRRRRRN 222


>ref|NP_001233874.1| protein DCL, chloroplastic [Solanum lycopersicum]
           gi|6014934|sp|Q42463.1|DCL_SOLLC RecName: Full=Protein
           DCL, chloroplastic; AltName: Full=Defective chloroplasts
           and leaves protein; Flags: Precursor
           gi|1305531|gb|AAC49433.1| defective chloroplasts and
           leaves; required for chloroplast development and
           palisade cell differentiation in leaves [Solanum
           lycopersicum] gi|1323698|gb|AAC49434.1| DCL [Solanum
           lycopersicum]
          Length = 224

 Score =  101 bits (252), Expect = 5e-20
 Identities = 45/50 (90%), Positives = 48/50 (96%)
 Frame = -3

Query: 274 SSRCLFIVRKDGEMVDFSYWKCIKGLIKKNYPLYADSFILRHFRRRRHND 125
           +SRCLFIVRKDGE VDFSYWKCIKGLI+KNYPLYADSFILRHFR+RR ND
Sbjct: 175 NSRCLFIVRKDGETVDFSYWKCIKGLIRKNYPLYADSFILRHFRKRRRND 224


>ref|NP_001031151.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332193993|gb|AEE32114.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 219

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 44/49 (89%), Positives = 47/49 (95%)
 Frame = -3

Query: 274 SSRCLFIVRKDGEMVDFSYWKCIKGLIKKNYPLYADSFILRHFRRRRHN 128
           SSRC+FIVRKDGE+VDFSYWKCIKGLIKK YPLYADSFILRHFR+RR N
Sbjct: 170 SSRCMFIVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRKRRQN 218


>ref|NP_683398.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12321014|gb|AAG50632.1|AC083835_17 defective
           chloroplasts and leaves (DCL) protein, putative
           [Arabidopsis thaliana] gi|22135799|gb|AAM91086.1|
           At1g45261/F2G19.1 [Arabidopsis thaliana]
           gi|48310651|gb|AAT41860.1| At1g45261 [Arabidopsis
           thaliana] gi|62318604|dbj|BAD95026.1| defective
           chloroplasts and leaves (DCL) protein [Arabidopsis
           thaliana] gi|332193992|gb|AEE32113.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 219

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 44/49 (89%), Positives = 47/49 (95%)
 Frame = -3

Query: 274 SSRCLFIVRKDGEMVDFSYWKCIKGLIKKNYPLYADSFILRHFRRRRHN 128
           SSRC+FIVRKDGE+VDFSYWKCIKGLIKK YPLYADSFILRHFR+RR N
Sbjct: 170 SSRCMFIVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRKRRQN 218


>ref|XP_002894020.1| hypothetical protein ARALYDRAFT_473852 [Arabidopsis lyrata subsp.
           lyrata] gi|297339862|gb|EFH70279.1| hypothetical protein
           ARALYDRAFT_473852 [Arabidopsis lyrata subsp. lyrata]
          Length = 218

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 44/49 (89%), Positives = 47/49 (95%)
 Frame = -3

Query: 274 SSRCLFIVRKDGEMVDFSYWKCIKGLIKKNYPLYADSFILRHFRRRRHN 128
           SSRC+FIVRKDGE+VDFSYWKCIKGLIKK YPLYADSFILRHFR+RR N
Sbjct: 169 SSRCMFIVRKDGEVVDFSYWKCIKGLIKKKYPLYADSFILRHFRKRRQN 217


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