BLASTX nr result

ID: Atractylodes22_contig00016174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016174
         (1076 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276539.1| PREDICTED: RING-H2 finger protein ATL80 [Vit...   171   3e-40
gb|AFW90598.1| E3 ubiquitin ligase [Solanum tuberosum]                169   1e-39
ref|XP_002526830.1| protein with unknown function [Ricinus commu...   166   9e-39
ref|XP_002526834.1| protein with unknown function [Ricinus commu...   165   2e-38
ref|XP_002532473.1| protein with unknown function [Ricinus commu...   161   2e-37

>ref|XP_002276539.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
           gi|296082570|emb|CBI21575.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score =  171 bits (433), Expect = 3e-40
 Identities = 88/182 (48%), Positives = 111/182 (60%)
 Frame = +3

Query: 183 MTRSYRFLTSSSPFDQTXXXXXXXXXXXSDFXXXXXXXXXXXXXXXXXXXXXRCAWLRRG 362
           MTRS RFL+S   ++ +           SDF                     RCAWLRRG
Sbjct: 1   MTRSSRFLSS---WNSSAAEPPEAVEVESDFVVILAALLCALICVVGLIAVARCAWLRRG 57

Query: 363 STAESRRIIGQPTANKGIKKKMVESLPKFVYDSAKEGGGKLSSSDCAICLVEYADGDEIR 542
           S   +R    QP ANKG+KKK+++SLPK  +D+   G      ++CAICL E+ +GDEIR
Sbjct: 58  SAGGARASATQPAANKGLKKKILQSLPKLTHDATVSG----KFAECAICLAEFVEGDEIR 113

Query: 543 VLPQCGHGFHVGCIDMWLGSHSSCPSCRQILVITRCLKCGEIPAVSSGQISTQAEHKGSQ 722
           VLPQCGHGFHV C+D WL SHSSCPSCRQILV+TRC +CG+ PA+ SG  ++ AE K  +
Sbjct: 114 VLPQCGHGFHVLCVDTWLSSHSSCPSCRQILVVTRCRQCGKFPAI-SGTATSDAELKARE 172

Query: 723 HG 728
            G
Sbjct: 173 QG 174


>gb|AFW90598.1| E3 ubiquitin ligase [Solanum tuberosum]
          Length = 170

 Score =  169 bits (428), Expect = 1e-39
 Identities = 83/131 (63%), Positives = 98/131 (74%), Gaps = 6/131 (4%)
 Frame = +3

Query: 339 RCAWLRRGSTAESRRIIG--QPTANKGIKKKMVESLPKFVYDSAKEGGGKLSSSDCAICL 512
           RCAWLRRG  A     IG  QP+ANKG+KKK+++SLPKF YD +    G   +++CAICL
Sbjct: 30  RCAWLRRGIGAGG---IGGSQPSANKGLKKKVLQSLPKFTYDPSSTANGAAFTAECAICL 86

Query: 513 VEYADGDEIRVLPQCGHGFHVGCIDMWLGSHSSCPSCRQILVITRCLKCGEIPAVS---- 680
            EYA GDEIRVLPQCGH FH+ CID WLGSHSSCPSCRQILV+TRC KCGE+PAVS    
Sbjct: 87  AEYAVGDEIRVLPQCGHIFHLQCIDTWLGSHSSCPSCRQILVVTRCRKCGELPAVSCKSD 146

Query: 681 SGQISTQAEHK 713
              ++T AE +
Sbjct: 147 GATVTTPAESR 157


>ref|XP_002526830.1| protein with unknown function [Ricinus communis]
           gi|223533834|gb|EEF35565.1| protein with unknown
           function [Ricinus communis]
          Length = 258

 Score =  166 bits (420), Expect = 9e-39
 Identities = 80/134 (59%), Positives = 99/134 (73%), Gaps = 6/134 (4%)
 Frame = +3

Query: 339 RCAWLRRGSTAESRRIIGQPTANKGIKKKMVESLPKFVYDSAKE-----GGGKLSSSDCA 503
           RCAWLRR  +A S     Q  ANKG+KKK+++SLPKF Y SA       G  K +S++CA
Sbjct: 102 RCAWLRRTGSASSYP--SQAAANKGLKKKILQSLPKFTYGSAAATAAAAGSCKYASTECA 159

Query: 504 ICLVEYADGDEIRVLPQCGHGFHVGCIDMWLGSHSSCPSCRQILVITRCLKCGEIPAVSS 683
           ICL E+ +GDE+RVLPQCGHGFHVGCID WLGSHSSCPSCRQILV+ RC KCG+ P +SS
Sbjct: 160 ICLGEFEEGDEVRVLPQCGHGFHVGCIDTWLGSHSSCPSCRQILVMARCHKCGQFPTISS 219

Query: 684 -GQISTQAEHKGSQ 722
            G  + +A+ K ++
Sbjct: 220 CGGATVEADRKATE 233


>ref|XP_002526834.1| protein with unknown function [Ricinus communis]
           gi|223533838|gb|EEF35569.1| protein with unknown
           function [Ricinus communis]
          Length = 207

 Score =  165 bits (418), Expect = 2e-38
 Identities = 79/134 (58%), Positives = 98/134 (73%), Gaps = 6/134 (4%)
 Frame = +3

Query: 339 RCAWLRRGSTAESRRIIGQPTANKGIKKKMVESLPKFVYDSAKE-----GGGKLSSSDCA 503
           RCAWLRR  T  +     Q  ANKG+KKK+++SLPKF Y SA       G  K +S++CA
Sbjct: 51  RCAWLRR--TGSASNYPSQAAANKGLKKKILQSLPKFTYGSAAATAAAAGSCKYASTECA 108

Query: 504 ICLVEYADGDEIRVLPQCGHGFHVGCIDMWLGSHSSCPSCRQILVITRCLKCGEIPAVSS 683
           ICL E+ +GDE+RVLPQCGHGFHVGCID WLGSHSSCPSCRQILV+ RC KCG+ P +SS
Sbjct: 109 ICLGEFEEGDEVRVLPQCGHGFHVGCIDTWLGSHSSCPSCRQILVMARCHKCGQFPTISS 168

Query: 684 -GQISTQAEHKGSQ 722
            G  + +A+ K ++
Sbjct: 169 CGGATVEADRKATE 182


>ref|XP_002532473.1| protein with unknown function [Ricinus communis]
           gi|223527798|gb|EEF29897.1| protein with unknown
           function [Ricinus communis]
          Length = 204

 Score =  161 bits (408), Expect = 2e-37
 Identities = 75/115 (65%), Positives = 87/115 (75%)
 Frame = +3

Query: 339 RCAWLRRGSTAESRRIIGQPTANKGIKKKMVESLPKFVYDSAKEGGGKLSSSDCAICLVE 518
           RCAWLR   +A S        ANKG+KKK+++SLPKF Y SA  G  K +S++CAICL E
Sbjct: 51  RCAWLRHSGSASSSP--SHAAANKGLKKKILQSLPKFTYGSAA-GSCKFASTECAICLGE 107

Query: 519 YADGDEIRVLPQCGHGFHVGCIDMWLGSHSSCPSCRQILVITRCLKCGEIPAVSS 683
           +A GDE+RVLPQCGHGFHVGCID WLGSHSSCPSCRQILV+ RC  CG  P +SS
Sbjct: 108 FAQGDEVRVLPQCGHGFHVGCIDTWLGSHSSCPSCRQILVVARCHTCGRFPTISS 162


Top