BLASTX nr result

ID: Atractylodes22_contig00016093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016093
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABC84197.1| SLF-interacting SKP1-like protein 1, partial [Ant...   111   8e-23
gb|ABK28664.1| unknown [Arabidopsis thaliana]                         105   6e-21
ref|NP_567959.1| S-phase kinase-associated protein 1 [Arabidopsi...   105   6e-21
gb|AEE39461.1| SLF-interacting SKP1-like protein 1 [Petunia inte...   103   1e-20
gb|ACT35733.1| SLF-interacting SKP1 [Petunia x hybrida] gi|25379...   103   1e-20

>gb|ABC84197.1| SLF-interacting SKP1-like protein 1, partial [Antirrhinum
           hispanicum] gi|85792318|gb|ABC84198.1| SLF-interacting
           SKP1-like protein 1 [Antirrhinum hispanicum]
           gi|85792335|gb|ABC84199.1| SLF-interacting SKP1-like
           protein 1 [Antirrhinum hispanicum]
          Length = 161

 Score =  111 bits (277), Expect = 8e-23
 Identities = 63/150 (42%), Positives = 95/150 (63%), Gaps = 6/150 (4%)
 Frame = +2

Query: 44  QAATMEMLTLISSDEQKFTIEKKIAIQSITIKNMVDGGSVPSVISLSEVDSETLSLVIEF 223
           + A  + LTL SSD Q FT+ +     S  IKNMV+   V + I +  VDS+TL+ VI F
Sbjct: 3   EVAEKKTLTLTSSDGQDFTVSESGGCLSEMIKNMVEDDCVTTAIPIPVVDSKTLAKVIVF 62

Query: 224 LNKQ--ASLSMDDLKGFVED----LEVATLLDLGKAASVLRINELMDLVAHKVADRLVHK 385
           L+K   +++S DD+K F E+    +E+  L DL  AA+ L I ++M++V  K+AD + +K
Sbjct: 63  LDKHGDSTISSDDMKKFDEEYVTGVEMGILFDLAAAANYLNIKDMMEVVTQKIADIMENK 122

Query: 386 TVAEAREILNIKNPFTPEEEQAIRDEHPWA 475
           +VA  R+   I+N   PEEE+A++DE+PWA
Sbjct: 123 SVAWVRKTFGIENDLDPEEEKALQDEYPWA 152


>gb|ABK28664.1| unknown [Arabidopsis thaliana]
          Length = 153

 Score =  105 bits (261), Expect = 6e-21
 Identities = 63/147 (42%), Positives = 88/147 (59%), Gaps = 8/147 (5%)
 Frame = +2

Query: 59  EMLTLISSDEQKFTIEKKIAIQSITIKNMVDGGSVPSVISLSEVDSETLSLVIEFLNKQA 238
           +M+ L+SSD Q F +E+ +AIQS TI +MV+   V   I L+ V+S+ L  VIE+  K  
Sbjct: 4   KMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKHH 63

Query: 239 -----SLSMDDLKGFVE---DLEVATLLDLGKAASVLRINELMDLVAHKVADRLVHKTVA 394
                 +S +DL  + E   DLE +T+ +L  AA+ L I  L+DL    VAD +  KT  
Sbjct: 64  VDEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGKTPE 123

Query: 395 EAREILNIKNPFTPEEEQAIRDEHPWA 475
           E R   NI+N FTPEEE+A+R E+ WA
Sbjct: 124 EIRSTFNIENDFTPEEEEAVRKENQWA 150


>ref|NP_567959.1| S-phase kinase-associated protein 1 [Arabidopsis thaliana]
           gi|75098745|sp|O49484.1|ASK11_ARATH RecName:
           Full=SKP1-like protein 11; Short=AtSK11
           gi|2911041|emb|CAA17551.1| kinetochore (SKP1p)-like
           protein [Arabidopsis thaliana]
           gi|7270371|emb|CAB80138.1| kinetochore (SKP1p)-like
           protein [Arabidopsis thaliana]
           gi|91806766|gb|ABE66110.1| E3 ubiquitin ligase SCF
           complex subunit SKP1/ASK1 [Arabidopsis thaliana]
           gi|332660940|gb|AEE86340.1| S-phase kinase-associated
           protein 1 [Arabidopsis thaliana]
          Length = 152

 Score =  105 bits (261), Expect = 6e-21
 Identities = 63/147 (42%), Positives = 88/147 (59%), Gaps = 8/147 (5%)
 Frame = +2

Query: 59  EMLTLISSDEQKFTIEKKIAIQSITIKNMVDGGSVPSVISLSEVDSETLSLVIEFLNKQA 238
           +M+ L+SSD Q F +E+ +AIQS TI +MV+   V   I L+ V+S+ L  VIE+  K  
Sbjct: 4   KMIVLMSSDGQSFEVEEAVAIQSQTIAHMVEDDCVADGIPLANVESKILVKVIEYCKKHH 63

Query: 239 -----SLSMDDLKGFVE---DLEVATLLDLGKAASVLRINELMDLVAHKVADRLVHKTVA 394
                 +S +DL  + E   DLE +T+ +L  AA+ L I  L+DL    VAD +  KT  
Sbjct: 64  VDEANPISEEDLNNWDEKFMDLEQSTIFELILAANYLNIKSLLDLTCQTVADMIKGKTPE 123

Query: 395 EAREILNIKNPFTPEEEQAIRDEHPWA 475
           E R   NI+N FTPEEE+A+R E+ WA
Sbjct: 124 EIRSTFNIENDFTPEEEEAVRKENQWA 150


>gb|AEE39461.1| SLF-interacting SKP1-like protein 1 [Petunia integrifolia subsp.
           inflata]
          Length = 179

 Score =  103 bits (258), Expect = 1e-20
 Identities = 66/167 (39%), Positives = 92/167 (55%), Gaps = 24/167 (14%)
 Frame = +2

Query: 47  AATMEMLTLISSDEQKFTIEKKIAIQSITIKNMVDGGSVPSVISLSEVDSETLSLVIEFL 226
           A+  +M+TL S+D+Q+F +E+   IQS  +KNM++     SVI L  +DS+TLS VIE+L
Sbjct: 2   ASEKKMVTLKSNDDQEFQVEEAAVIQSEMLKNMIEDDCASSVIPLPNIDSKTLSKVIEYL 61

Query: 227 NKQASL---------------------SMDDLKGFVE---DLEVATLLDLGKAASVLRIN 334
           NK  +                        DDLK F E   ++    L D+  AA+ L I+
Sbjct: 62  NKHITRDEDEDEEQEESEDKGKEVDTGEEDDLKEFDEQFVNVGFEELFDIIMAANYLNIH 121

Query: 335 ELMDLVAHKVADRLVHKTVAEAREILNIKNPFTPEEEQAIRDEHPWA 475
           ELM+L     ADRL +K+V   RE+L I N  T EEEQ I ++ PWA
Sbjct: 122 ELMELCCQSAADRLKNKSVRAVREMLKITNDLTEEEEQEIINDAPWA 168


>gb|ACT35733.1| SLF-interacting SKP1 [Petunia x hybrida]
           gi|253796260|gb|ACT35734.1| SLF-interacting SKP1
           [Petunia x hybrida]
          Length = 179

 Score =  103 bits (258), Expect = 1e-20
 Identities = 66/167 (39%), Positives = 92/167 (55%), Gaps = 24/167 (14%)
 Frame = +2

Query: 47  AATMEMLTLISSDEQKFTIEKKIAIQSITIKNMVDGGSVPSVISLSEVDSETLSLVIEFL 226
           A+  +M+TL S+D+Q+F +E+   IQS  +KNM++     SVI L  +DS+TLS VIE+L
Sbjct: 2   ASEKKMVTLKSNDDQEFQVEEAAVIQSEMLKNMIEDDCASSVIPLPNIDSKTLSKVIEYL 61

Query: 227 NKQASL---------------------SMDDLKGFVE---DLEVATLLDLGKAASVLRIN 334
           NK  +                        DDLK F E   ++    L D+  AA+ L I+
Sbjct: 62  NKHITRDEDEDEEQEEGKDKGKEVDTGEEDDLKEFDEQFVNVGFEELFDIIMAANYLNIH 121

Query: 335 ELMDLVAHKVADRLVHKTVAEAREILNIKNPFTPEEEQAIRDEHPWA 475
           ELM+L     ADRL +K+V   RE+L I N  T EEEQ I ++ PWA
Sbjct: 122 ELMELCCQSAADRLKNKSVRAVREMLKITNDLTEEEEQEIINDAPWA 168


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