BLASTX nr result
ID: Atractylodes22_contig00016048
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00016048
(372 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containi... 159 1e-38
emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera] 159 3e-38
ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containi... 148 2e-36
ref|XP_002301924.1| predicted protein [Populus trichocarpa] gi|2... 148 1e-35
ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containi... 149 1e-35
>ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product
[Vitis vinifera]
Length = 695
Score = 159 bits (402), Expect(2) = 1e-38
Identities = 72/110 (65%), Positives = 87/110 (79%)
Frame = -2
Query: 371 MQICGVKTDRQFYNVMINTLGKKNILDHVMAAVERMRVKGIERDTVTWITLIDCHCKSGH 192
M+ GV DR FYNVMI+T GK N LDH +A +RMR++G++ D VTW TLIDCHCKSGH
Sbjct: 422 MRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGH 481
Query: 191 HEKAEKLFDEMQQSGYLPCVTTYYIMINLFGQQEKWNKVKSLLGKMQSEG 42
H KAE+LF+ MQ+SG PC TTY IMIN FG+QE+W VK+LLGKMQS+G
Sbjct: 482 HNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQG 531
Score = 25.8 bits (55), Expect(2) = 1e-38
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -3
Query: 40 GLMPNVVTYTTLV 2
GL+ NVVTYTTLV
Sbjct: 531 GLLANVVTYTTLV 543
Score = 54.7 bits (130), Expect(2) = 1e-06
Identities = 30/110 (27%), Positives = 57/110 (51%)
Frame = -2
Query: 371 MQICGVKTDRQFYNVMINTLGKKNILDHVMAAVERMRVKGIERDTVTWITLIDCHCKSGH 192
MQ G YN+MIN+ G++ + V + +M+ +G+ + VT+ TL+D + +SG
Sbjct: 492 MQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGR 551
Query: 191 HEKAEKLFDEMQQSGYLPCVTTYYIMINLFGQQEKWNKVKSLLGKMQSEG 42
+ A + + M+ G P T Y +IN + Q+ + + M+++G
Sbjct: 552 FKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADG 601
Score = 22.3 bits (46), Expect(2) = 1e-06
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3
Query: 37 LMPNVVTYTTLV 2
L P+VVTYTTL+
Sbjct: 637 LKPDVVTYTTLM 648
>emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
Length = 724
Score = 159 bits (402), Expect(2) = 3e-38
Identities = 72/110 (65%), Positives = 87/110 (79%)
Frame = -2
Query: 371 MQICGVKTDRQFYNVMINTLGKKNILDHVMAAVERMRVKGIERDTVTWITLIDCHCKSGH 192
M+ GV DR FYNVMI+T GK N LDH +A +RMR++G++ D VTW TLIDCHCKSGH
Sbjct: 493 MRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGH 552
Query: 191 HEKAEKLFDEMQQSGYLPCVTTYYIMINLFGQQEKWNKVKSLLGKMQSEG 42
H KAE+LF+ MQ+SG PC TTY IMIN FG+QE+W VK+LLGKMQS+G
Sbjct: 553 HNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQG 602
Score = 24.3 bits (51), Expect(2) = 3e-38
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3
Query: 40 GLMPNVVTYTTL 5
GL+ NVVTYTTL
Sbjct: 602 GLLANVVTYTTL 613
>ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
gi|449489420|ref|XP_004158306.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Cucumis sativus]
Length = 720
Score = 148 bits (374), Expect(2) = 2e-36
Identities = 70/110 (63%), Positives = 84/110 (76%)
Frame = -2
Query: 371 MQICGVKTDRQFYNVMINTLGKKNILDHVMAAVERMRVKGIERDTVTWITLIDCHCKSGH 192
M+ VK DR FYNVMI+T GK N LDH M +RM +GIE D VTW TLIDCH K G+
Sbjct: 447 MKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGY 506
Query: 191 HEKAEKLFDEMQQSGYLPCVTTYYIMINLFGQQEKWNKVKSLLGKMQSEG 42
H++A +LF+EMQ+ GYLPC TTY IMIN G+QEKW++VK LLGKMQS+G
Sbjct: 507 HDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQG 556
Score = 28.9 bits (63), Expect(2) = 2e-36
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -3
Query: 40 GLMPNVVTYTTLV 2
GL+PNVVTYTTLV
Sbjct: 556 GLLPNVVTYTTLV 568
Score = 57.4 bits (137), Expect(2) = 5e-07
Identities = 31/98 (31%), Positives = 52/98 (53%)
Frame = -2
Query: 335 YNVMINTLGKKNILDHVMAAVERMRVKGIERDTVTWITLIDCHCKSGHHEKAEKLFDEMQ 156
YN+MIN+LG++ D V + +M+ +G+ + VT+ TL+D + SG A + M+
Sbjct: 529 YNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMK 588
Query: 155 QSGYLPCVTTYYIMINLFGQQEKWNKVKSLLGKMQSEG 42
+G P T Y +IN F Q+ + + M S+G
Sbjct: 589 SAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDG 626
Score = 21.2 bits (43), Expect(2) = 5e-07
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -3
Query: 31 PNVVTYTTLV 2
P+VVTYTTL+
Sbjct: 664 PDVVTYTTLM 673
>ref|XP_002301924.1| predicted protein [Populus trichocarpa] gi|222843650|gb|EEE81197.1|
predicted protein [Populus trichocarpa]
Length = 709
Score = 148 bits (373), Expect(2) = 1e-35
Identities = 66/110 (60%), Positives = 86/110 (78%)
Frame = -2
Query: 371 MQICGVKTDRQFYNVMINTLGKKNILDHVMAAVERMRVKGIERDTVTWITLIDCHCKSGH 192
M+ GV+ DR FYNV+I+T GK N LDH MA +RM +GIE DT+TW TL+DCHCK+G
Sbjct: 437 MEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGK 496
Query: 191 HEKAEKLFDEMQQSGYLPCVTTYYIMINLFGQQEKWNKVKSLLGKMQSEG 42
H++AE+LF+EM + GYLPC TT+ IMIN FG QE+W+ VK+LL M+S+G
Sbjct: 497 HDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQG 546
Score = 26.9 bits (58), Expect(2) = 1e-35
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = -3
Query: 40 GLMPNVVTYTTLV 2
GL+PN VTYTTL+
Sbjct: 546 GLLPNAVTYTTLI 558
Score = 60.1 bits (144), Expect(2) = 3e-08
Identities = 31/98 (31%), Positives = 54/98 (55%)
Frame = -2
Query: 335 YNVMINTLGKKNILDHVMAAVERMRVKGIERDTVTWITLIDCHCKSGHHEKAEKLFDEMQ 156
+N+MIN+ G + D V + MR +G+ + VT+ TLID + KSG + A + D+M+
Sbjct: 519 FNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMK 578
Query: 155 QSGYLPCVTTYYIMINLFGQQEKWNKVKSLLGKMQSEG 42
+G P T Y ++N + Q+ ++ S M+ +G
Sbjct: 579 AAGLKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDG 616
Score = 22.3 bits (46), Expect(2) = 3e-08
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3
Query: 37 LMPNVVTYTTLV 2
L P+VVTYTTL+
Sbjct: 652 LKPDVVTYTTLM 663
>ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial-like [Glycine max]
Length = 680
Score = 149 bits (377), Expect(2) = 1e-35
Identities = 69/110 (62%), Positives = 82/110 (74%)
Frame = -2
Query: 371 MQICGVKTDRQFYNVMINTLGKKNILDHVMAAVERMRVKGIERDTVTWITLIDCHCKSGH 192
M+ GV+ DR FYNVMI+T GK N LDH MA ERM +GI D VTW TLIDCHCKSG
Sbjct: 407 MKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGR 466
Query: 191 HEKAEKLFDEMQQSGYLPCVTTYYIMINLFGQQEKWNKVKSLLGKMQSEG 42
H+ AE+LF EMQQ GY PC+TTY IMIN G+Q++W +V + L KMQS+G
Sbjct: 467 HDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQG 516
Score = 25.4 bits (54), Expect(2) = 1e-35
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3
Query: 40 GLMPNVVTYTTLV 2
GL PN +TYTTLV
Sbjct: 516 GLQPNSITYTTLV 528
Score = 60.5 bits (145), Expect(2) = 6e-08
Identities = 28/98 (28%), Positives = 57/98 (58%)
Frame = -2
Query: 335 YNVMINTLGKKNILDHVMAAVERMRVKGIERDTVTWITLIDCHCKSGHHEKAEKLFDEMQ 156
YN+MIN++G++ + V A + +M+ +G++ +++T+ TL+D + KSG A + + ++
Sbjct: 489 YNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLK 548
Query: 155 QSGYLPCVTTYYIMINLFGQQEKWNKVKSLLGKMQSEG 42
+G+ P T Y +IN + Q+ + M +EG
Sbjct: 549 STGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEG 586
Score = 21.2 bits (43), Expect(2) = 6e-08
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -3
Query: 31 PNVVTYTTLV 2
P+VVTYTTL+
Sbjct: 624 PDVVTYTTLM 633