BLASTX nr result
ID: Atractylodes22_contig00016035
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00016035
(1613 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding prote... 580 e-163
emb|CBI16387.3| unnamed protein product [Vitis vinifera] 565 e-158
ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding prote... 564 e-158
ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP... 471 e-130
ref|XP_002468416.1| hypothetical protein SORBIDRAFT_01g045570 [S... 464 e-128
>ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
1 [Vitis vinifera]
Length = 447
Score = 580 bits (1494), Expect = e-163
Identities = 293/428 (68%), Positives = 324/428 (75%), Gaps = 7/428 (1%)
Frame = -3
Query: 1497 SSHEEIRTLWIGDLPYWADESYLHSWFAATNEVLSIKVIRNKATGLPEGYGFVEFASHGT 1318
+S EE+RTLWIGDL YW DE+YLHS FA T EV+SIK+IRNK TG PEGYGFVEF SH
Sbjct: 35 TSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAA 94
Query: 1317 AERVLQSYNGTQIPGTELTFRLNWASSGIGERRPDAGPEHSIFVGDLAPDVTDHLLQETF 1138
AER+LQ+YNGTQ+PGTE TFRLNWAS GIGERRPDAGPEHSIFVGDLAPDVTD+LLQETF
Sbjct: 95 AERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETF 154
Query: 1137 RTQYPSVRGAKVVTDPNTGRSKGYGFVKFADEMEKNRAMTEMNGIYCSTRPMRISAATPK 958
R QYPSVRGAKVVTDPNTGR+KGYGFVKF+DEME+NRAMTEMNG+YCSTRPMRISAATPK
Sbjct: 155 RAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRISAATPK 214
Query: 957 KTTVFQQQY-VAPKGLY------TAPVPAIPVDNDITNTTIYIGNLDPVVTEEELRQIFL 799
KTT FQQQY A K LY T P+ A+P DNDI NTTI++GNLDP VTEEEL+QIF
Sbjct: 215 KTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVGNLDPNVTEEELKQIFS 274
Query: 798 QFGEIVYAKIPAAKGCGFVQFTARTSAEEAIQRMHGSQIGQTVVHLSWGKSTTAKQDPSG 619
QFGE+VY KIPA +GCGFVQF RTSAEEAIQRM G+ IGQ VV +SWG+S TAKQD G
Sbjct: 275 QFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVVRISWGRSPTAKQDLPG 334
Query: 618 VWNPQADPTQWXXXXXXXXXXYDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 439
W QADP+QW YDA
Sbjct: 335 SWGQQADPSQWSSAYYGYGQGYDA---------------------YPYGATQDPSLYAYG 373
Query: 438 XXXXXMQYPQQGEGAQDMGAVAGVAPPVEQREEIYDPLATPDVDKLNSAYLAIHGSAILG 259
+QYPQQ EG QD+ A+AG P VEQR+E+YDPLATPDVDKLN+AYLA+HGSAILG
Sbjct: 374 AYAGYLQYPQQAEGVQDLAAMAGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILG 433
Query: 258 RPLWQKTS 235
R LW KTS
Sbjct: 434 RSLWLKTS 441
>emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 565 bits (1455), Expect = e-158
Identities = 289/428 (67%), Positives = 320/428 (74%), Gaps = 7/428 (1%)
Frame = -3
Query: 1497 SSHEEIRTLWIGDLPYWADESYLHSWFAATNEVLSIKVIRNKATGLPEGYGFVEFASHGT 1318
+S EE+RTLWIGDL YW DE+YLHS FA T EV+SIK+IRNK TG PEGYGFVEF SH
Sbjct: 35 TSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAA 94
Query: 1317 AERVLQSYNGTQIPGTELTFRLNWASSGIGERRPDAGPEHSIFVGDLAPDVTDHLLQETF 1138
AER+LQ+YNGTQ+PGTE TFRLNWAS GIGERRPDAGPEHSIFVGDLAPDVTD+LLQETF
Sbjct: 95 AERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETF 154
Query: 1137 RTQYPSVRGAKVVTDPNTGRSKGYGFVKFADEMEKNRAMTEMNGIYCSTRPMRISAATPK 958
R QYPSVRGAKVVTDPNTGR+KGYGFVKF+DEME+NRAMTEMNG+YCSTRPMRISAATPK
Sbjct: 155 RAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRISAATPK 214
Query: 957 KTTVFQQQY-VAPKGLY------TAPVPAIPVDNDITNTTIYIGNLDPVVTEEELRQIFL 799
KTT FQQQY A K LY T P+ A+P DNDI NTTI++GNLDP VTEEEL+QIF
Sbjct: 215 KTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVGNLDPNVTEEELKQIFS 274
Query: 798 QFGEIVYAKIPAAKGCGFVQFTARTSAEEAIQRMHGSQIGQTVVHLSWGKSTTAKQDPSG 619
QFGE+VY KIPA +GCGFVQF RTSAEEAIQRM G+ IGQ VV +SWG+S TAKQD G
Sbjct: 275 QFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVVRISWGRSPTAKQDLPG 334
Query: 618 VWNPQADPTQWXXXXXXXXXXYDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 439
W QADP+QW YDA
Sbjct: 335 SWGQQADPSQWSSAYYGYGQGYDA---------------------YPYGATQDPSLYAYG 373
Query: 438 XXXXXMQYPQQGEGAQDMGAVAGVAPPVEQREEIYDPLATPDVDKLNSAYLAIHGSAILG 259
+QYPQQ + A+AG P VEQR+E+YDPLATPDVDKLN+AYLA+HGSAILG
Sbjct: 374 AYAGYLQYPQQAR--YYLAAMAGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILG 431
Query: 258 RPLWQKTS 235
R LW KTS
Sbjct: 432 RSLWLKTS 439
>ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
2 [Vitis vinifera]
Length = 438
Score = 564 bits (1453), Expect = e-158
Identities = 289/428 (67%), Positives = 320/428 (74%), Gaps = 7/428 (1%)
Frame = -3
Query: 1497 SSHEEIRTLWIGDLPYWADESYLHSWFAATNEVLSIKVIRNKATGLPEGYGFVEFASHGT 1318
+S EE+RTLWIGDL YW DE+YLHS FA T EV+SIK+IRNK TG PEGYGFVEF SH
Sbjct: 35 TSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAA 94
Query: 1317 AERVLQSYNGTQIPGTELTFRLNWASSGIGERRPDAGPEHSIFVGDLAPDVTDHLLQETF 1138
AER+LQ+YNGTQ+PGTE TFRLNWAS GIGERRPDAGPEHSIFVGDLAPDVTD+LLQETF
Sbjct: 95 AERILQAYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETF 154
Query: 1137 RTQYPSVRGAKVVTDPNTGRSKGYGFVKFADEMEKNRAMTEMNGIYCSTRPMRISAATPK 958
R QYPSVRGAKVVTDPNTGR+KGYGFVKF+DEME+NRAMTEMNG+YCSTRPMRISAATPK
Sbjct: 155 RAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDEMERNRAMTEMNGVYCSTRPMRISAATPK 214
Query: 957 KTTVFQQQY-VAPKGLY------TAPVPAIPVDNDITNTTIYIGNLDPVVTEEELRQIFL 799
KTT FQQQY A K LY T P+ A+P DNDI NTTI++GNLDP VTEEEL+QIF
Sbjct: 215 KTTGFQQQYAAAAKALYPAPAYTTPPLQALPADNDINNTTIFVGNLDPNVTEEELKQIFS 274
Query: 798 QFGEIVYAKIPAAKGCGFVQFTARTSAEEAIQRMHGSQIGQTVVHLSWGKSTTAKQDPSG 619
QFGE+VY KIPA +GCGFVQF RTSAEEAIQRM G+ IGQ VV +SWG+S TAK
Sbjct: 275 QFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQRMQGTVIGQLVVRISWGRSPTAK----- 329
Query: 618 VWNPQADPTQWXXXXXXXXXXYDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 439
QADP+QW YDA
Sbjct: 330 ----QADPSQWSSAYYGYGQGYDA---------------------YPYGATQDPSLYAYG 364
Query: 438 XXXXXMQYPQQGEGAQDMGAVAGVAPPVEQREEIYDPLATPDVDKLNSAYLAIHGSAILG 259
+QYPQQ EG QD+ A+AG P VEQR+E+YDPLATPDVDKLN+AYLA+HGSAILG
Sbjct: 365 AYAGYLQYPQQAEGVQDLAAMAGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILG 424
Query: 258 RPLWQKTS 235
R LW KTS
Sbjct: 425 RSLWLKTS 432
>ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
sativus]
Length = 422
Score = 471 bits (1211), Expect = e-130
Identities = 229/306 (74%), Positives = 250/306 (81%), Gaps = 5/306 (1%)
Frame = -3
Query: 1488 EEIRTLWIGDLPYWADESYLHSWFAATNEVLSIKVIRNKATGLPEGYGFVEFASHGTAER 1309
EE+RTLWIGDL YW DESYL+S FA T EV+SIK+IRNK TG PEGYGFVEF SH AER
Sbjct: 17 EEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAER 76
Query: 1308 VLQSYNGTQIPGTELTFRLNWASSGIGERRPDAGPEHSIFVGDLAPDVTDHLLQETFRTQ 1129
+LQ+YNGTQ+PGTE TFRLNWAS GIGERRPDAGPEHSIFVGDLAPDVTD+LLQETFR Q
Sbjct: 77 ILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQ 136
Query: 1128 YPSVRGAKVVTDPNTGRSKGYGFVKFADEMEKNRAMTEMNGIYCSTRPMRISAATPKKTT 949
YPSVRGAKVVTDPNTGRSKGYGFVKFADE E+NRAM+EMNG+YCSTRPMRISAATPKKT
Sbjct: 137 YPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATPKKTI 196
Query: 948 VFQQQYVAPKGLYTAP-----VPAIPVDNDITNTTIYIGNLDPVVTEEELRQIFLQFGEI 784
QQQY K +Y P VP +P D D NTTI++GNLDP +TEEEL+Q FLQFGEI
Sbjct: 197 GVQQQYSLGKAMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEI 256
Query: 783 VYAKIPAAKGCGFVQFTARTSAEEAIQRMHGSQIGQTVVHLSWGKSTTAKQDPSGVWNPQ 604
Y KIPA KGCGFVQF R SAEEAIQ+M G IGQ VV SWG++ AKQD + W Q
Sbjct: 257 AYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLT-TWGQQ 315
Query: 603 ADPTQW 586
DP QW
Sbjct: 316 VDPNQW 321
Score = 79.7 bits (195), Expect = 2e-12
Identities = 41/63 (65%), Positives = 44/63 (69%)
Frame = -3
Query: 417 YPQQGEGAQDMGAVAGVAPPVEQREEIYDPLATPDVDKLNSAYLAIHGSAILGRPLWQKT 238
YPQQ +G QD+ VAG P VEQ EE D L TPDVD LN AYL+ H SAILG PLW T
Sbjct: 356 YPQQVDGVQDLATVAGAVPSVEQGEEWNDTLDTPDVDCLNDAYLSKHESAILGWPLWLTT 415
Query: 237 SSL 229
SSL
Sbjct: 416 SSL 418
>ref|XP_002468416.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
gi|241922270|gb|EER95414.1| hypothetical protein
SORBIDRAFT_01g045570 [Sorghum bicolor]
Length = 415
Score = 464 bits (1194), Expect = e-128
Identities = 223/310 (71%), Positives = 254/310 (81%), Gaps = 6/310 (1%)
Frame = -3
Query: 1497 SSHEEIRTLWIGDLPYWADESYLHSWFAATNEVLSIKVIRNKATGLPEGYGFVEFASHGT 1318
+S EE+RTLWIGDL YW DE+YL+S FA T EV S+K+IRNK T LPEGYGF+EF SH
Sbjct: 9 TSLEEVRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEA 68
Query: 1317 AERVLQSYNGTQIPGTELTFRLNWASSGIGERRPDAGPEHSIFVGDLAPDVTDHLLQETF 1138
AE++LQ+YNGTQ+PGTE TFRLNWAS GERRPD G +HSIFVGDLAPDVTD+LLQETF
Sbjct: 69 AEKILQTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETF 128
Query: 1137 RTQYPSVRGAKVVTDPNTGRSKGYGFVKFADEMEKNRAMTEMNGIYCSTRPMRISAATPK 958
R YPSVRGAKVVTDPNTGRSKGYGFVKFADE EKNRAMTEMNG+YCSTRPMRISAA PK
Sbjct: 129 RVNYPSVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPMRISAAIPK 188
Query: 957 KTTVFQQQYVAPKGLYTAPVPAIP------VDNDITNTTIYIGNLDPVVTEEELRQIFLQ 796
K+T Q QY A K +Y A A+P D+D TNTTI+IGNLDP VTE+ELRQI +Q
Sbjct: 189 KSTGSQLQYSAAKAVYPATAYAMPQLQAVLPDSDPTNTTIFIGNLDPNVTEDELRQICVQ 248
Query: 795 FGEIVYAKIPAAKGCGFVQFTARTSAEEAIQRMHGSQIGQTVVHLSWGKSTTAKQDPSGV 616
FGE++Y KIP KGCGFVQ+ +R SAEEA+QR+HG+ IGQ V LSWG+S +KQDPS V
Sbjct: 249 FGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPASKQDPSAV 308
Query: 615 WNPQADPTQW 586
W+ QADP QW
Sbjct: 309 WSQQADPNQW 318
Score = 84.3 bits (207), Expect = 8e-14
Identities = 39/64 (60%), Positives = 49/64 (76%)
Frame = -3
Query: 420 QYPQQGEGAQDMGAVAGVAPPVEQREEIYDPLATPDVDKLNSAYLAIHGSAILGRPLWQK 241
QYPQQ EG D +VAG P +EQ+EE YDP+ PDVDKLN++Y+A+HG A+LGR LW K
Sbjct: 348 QYPQQIEGGVDATSVAGSHPGMEQKEEPYDPMNIPDVDKLNASYMAVHGRAMLGRSLWLK 407
Query: 240 TSSL 229
T+ L
Sbjct: 408 TNPL 411