BLASTX nr result

ID: Atractylodes22_contig00016018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016018
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308090.1| predicted protein [Populus trichocarpa] gi|2...    72   3e-20
ref|XP_003532455.1| PREDICTED: isoamylase 1, chloroplastic-like ...    67   4e-19
ref|XP_003630623.1| Isoamylase [Medicago truncatula] gi|35552464...    67   1e-18
ref|XP_002324659.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-18
dbj|BAF52941.1| isoamylase-type starch-debranching enzyme 1 [Pha...    66   4e-18

>ref|XP_002308090.1| predicted protein [Populus trichocarpa] gi|222854066|gb|EEE91613.1|
           predicted protein [Populus trichocarpa]
          Length = 826

 Score = 72.0 bits (175), Expect(2) = 3e-20
 Identities = 30/39 (76%), Positives = 32/39 (82%)
 Frame = +1

Query: 628 FLTKIFCFQGVPMIHMGDEYGHTKGGNNNTYCHDNHVLF 744
           F   +   QGVPMI+MGDEYGHTKGGNNNTYCHDNHV F
Sbjct: 606 FFLCLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNHVTF 644



 Score = 53.5 bits (127), Expect(2) = 3e-20
 Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
 Frame = +2

Query: 809 SLQMNYFQWDKKEESS-DFFRFCRLITNFRQ*GHHLNMISF 928
           ++Q+NYF+WDKKEESS DFFRFCRL+T FR     L +  F
Sbjct: 670 TMQINYFRWDKKEESSSDFFRFCRLMTKFRHECESLGLNDF 710


>ref|XP_003532455.1| PREDICTED: isoamylase 1, chloroplastic-like [Glycine max]
          Length = 796

 Score = 67.4 bits (163), Expect(2) = 4e-19
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = +1

Query: 628 FLTKIFCFQGVPMIHMGDEYGHTKGGNNNTYCHDNH 735
           F   +   QGVPMI+MGDEYGHTKGGNNNTYCHDN+
Sbjct: 607 FFLSLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNY 642



 Score = 54.3 bits (129), Expect(2) = 4e-19
 Identities = 26/37 (70%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
 Frame = +2

Query: 821 NYFQWDKKEESS-DFFRFCRLITNFRQ*GHHLNMISF 928
           NYFQWDKKEESS DFFRFCRL+T FRQ    L +  F
Sbjct: 644 NYFQWDKKEESSSDFFRFCRLMTKFRQECESLGLADF 680


>ref|XP_003630623.1| Isoamylase [Medicago truncatula] gi|355524645|gb|AET05099.1|
           Isoamylase [Medicago truncatula]
          Length = 822

 Score = 66.6 bits (161), Expect(2) = 1e-18
 Identities = 27/37 (72%), Positives = 30/37 (81%)
 Frame = +1

Query: 628 FLTKIFCFQGVPMIHMGDEYGHTKGGNNNTYCHDNHV 738
           F   +   QGVPMI MGDEYGHTKGGNNNTYCHDN++
Sbjct: 633 FFLSLMVSQGVPMIFMGDEYGHTKGGNNNTYCHDNYL 669



 Score = 53.1 bits (126), Expect(2) = 1e-18
 Identities = 25/38 (65%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
 Frame = +2

Query: 818 MNYFQWDKKEESS-DFFRFCRLITNFRQ*GHHLNMISF 928
           +NYF+WDKKEESS DFFRFCRL+T FRQ    L +  F
Sbjct: 669 LNYFRWDKKEESSSDFFRFCRLLTKFRQECESLGLDDF 706


>ref|XP_002324659.1| predicted protein [Populus trichocarpa] gi|222866093|gb|EEF03224.1|
           predicted protein [Populus trichocarpa]
          Length = 801

 Score = 69.7 bits (169), Expect(2) = 2e-18
 Identities = 28/37 (75%), Positives = 31/37 (83%)
 Frame = +1

Query: 628 FLTKIFCFQGVPMIHMGDEYGHTKGGNNNTYCHDNHV 738
           F   +   QGVPMIHMGDEYGHTKGGNNNTYCHDN++
Sbjct: 605 FFLCLMVSQGVPMIHMGDEYGHTKGGNNNTYCHDNYI 641



 Score = 49.3 bits (116), Expect(2) = 2e-18
 Identities = 24/38 (63%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
 Frame = +2

Query: 818 MNYFQWDKKEESS-DFFRFCRLITNFRQ*GHHLNMISF 928
           +NYF WDKKEESS DFFRFCRL+T FR     L +  F
Sbjct: 641 INYFWWDKKEESSSDFFRFCRLMTKFRHECESLGLNDF 678


>dbj|BAF52941.1| isoamylase-type starch-debranching enzyme 1 [Phaseolus vulgaris]
          Length = 791

 Score = 66.2 bits (160), Expect(2) = 4e-18
 Identities = 26/29 (89%), Positives = 29/29 (100%)
 Frame = +1

Query: 652 QGVPMIHMGDEYGHTKGGNNNTYCHDNHV 738
           QGVPMI+MGDEYGHTKGGNNNTYCHDN++
Sbjct: 610 QGVPMIYMGDEYGHTKGGNNNTYCHDNYL 638



 Score = 52.0 bits (123), Expect(2) = 4e-18
 Identities = 25/38 (65%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
 Frame = +2

Query: 818 MNYFQWDKKEESS-DFFRFCRLITNFRQ*GHHLNMISF 928
           +NYFQWDKKEESS DFFRFC L+T FRQ    L +  F
Sbjct: 638 LNYFQWDKKEESSSDFFRFCCLVTKFRQECESLGLDDF 675


Top