BLASTX nr result

ID: Atractylodes22_contig00016000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00016000
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553326.1| PREDICTED: RNA-binding protein 40-like [Glyc...    65   1e-08
ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...    65   2e-08
ref|XP_003624600.1| RNA-binding protein [Medicago truncatula] gi...    65   2e-08
ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti...    65   2e-08
emb|CBI36673.3| unnamed protein product [Vitis vinifera]               65   2e-08

>ref|XP_003553326.1| PREDICTED: RNA-binding protein 40-like [Glycine max]
          Length = 452

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 35/64 (54%), Positives = 42/64 (65%)
 Frame = -2

Query: 203 SVPRMRNCALVDFSNEGLTIQAQRRLNGLRFLGKVLSIERASTPPHDTRSQQNKPMLGND 24
           S  R+RNCA  DF NE +  QAQR+LNGLRFLGKVLS ERAS P  +   + +   LG D
Sbjct: 66  STGRLRNCAFADFKNEIVASQAQRQLNGLRFLGKVLSAERASNPT-ENGEKSSGDQLGKD 124

Query: 23  TMPS 12
           +  S
Sbjct: 125 SKTS 128


>ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 40-like [Vitis
           vinifera]
          Length = 463

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 32/57 (56%), Positives = 42/57 (73%)
 Frame = -2

Query: 194 RMRNCALVDFSNEGLTIQAQRRLNGLRFLGKVLSIERASTPPHDTRSQQNKPMLGND 24
           R+RNCA VDF +E L  QA R+LNGLRFLGKVL +ERA+ P  D + Q+++ + G D
Sbjct: 56  RLRNCAFVDFKSEMLASQALRQLNGLRFLGKVLLVERANKPTEDDK-QKSEALFGKD 111


>ref|XP_003624600.1| RNA-binding protein [Medicago truncatula]
           gi|355499615|gb|AES80818.1| RNA-binding protein
           [Medicago truncatula]
          Length = 492

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 34/64 (53%), Positives = 43/64 (67%)
 Frame = -2

Query: 203 SVPRMRNCALVDFSNEGLTIQAQRRLNGLRFLGKVLSIERASTPPHDTRSQQNKPMLGND 24
           S  R+RNCA VDF N+ L  QAQR+LNGL+FLGKVLS ERA   P++   + +   LG D
Sbjct: 58  SAGRLRNCAFVDFKNDMLASQAQRQLNGLKFLGKVLSAERAG-KPNENVGKSSGAQLGKD 116

Query: 23  TMPS 12
           +  S
Sbjct: 117 SKTS 120


>ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera]
           gi|298205172|emb|CBI17231.3| unnamed protein product
           [Vitis vinifera]
          Length = 463

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 32/57 (56%), Positives = 42/57 (73%)
 Frame = -2

Query: 194 RMRNCALVDFSNEGLTIQAQRRLNGLRFLGKVLSIERASTPPHDTRSQQNKPMLGND 24
           R+RNCA VDF +E L  QA R+LNGLRFLGKVL +ERA+ P  D + Q+++ + G D
Sbjct: 56  RLRNCAFVDFKSEMLASQALRQLNGLRFLGKVLLVERANKPTEDDK-QKSEALFGKD 111


>emb|CBI36673.3| unnamed protein product [Vitis vinifera]
          Length = 190

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 32/57 (56%), Positives = 42/57 (73%)
 Frame = -2

Query: 194 RMRNCALVDFSNEGLTIQAQRRLNGLRFLGKVLSIERASTPPHDTRSQQNKPMLGND 24
           R+RNCA VDF +E L  QA R+LNGLRFLGKVL +ERA+ P  D + Q+++ + G D
Sbjct: 56  RLRNCAFVDFKSEMLASQALRQLNGLRFLGKVLLVERANKPTEDDK-QKSEALFGKD 111


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