BLASTX nr result

ID: Atractylodes22_contig00015955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00015955
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631646.1| PREDICTED: uncharacterized protein LOC100853...   330   3e-88
ref|XP_004162746.1| PREDICTED: uncharacterized LOC101203623 [Cuc...   310   3e-82
ref|XP_004137132.1| PREDICTED: uncharacterized protein LOC101203...   310   3e-82
ref|XP_002305414.1| predicted protein [Populus trichocarpa] gi|2...   296   3e-78
ref|NP_188517.1| Mitochondrial transcription termination factor ...   293   3e-77

>ref|XP_003631646.1| PREDICTED: uncharacterized protein LOC100853221 [Vitis vinifera]
           gi|297741449|emb|CBI32580.3| unnamed protein product
           [Vitis vinifera]
          Length = 276

 Score =  330 bits (845), Expect = 3e-88
 Identities = 166/262 (63%), Positives = 202/262 (77%), Gaps = 5/262 (1%)
 Frame = -1

Query: 773 SSSYRPPQPHRNGRLHFRTSHRKNLRYLKSLGIIQPAT-----PTPHTLSHILSTLHYFK 609
           SSS  PP       L FRTSHR+NLRYLK+LGII P+T     P+P  +  +LST+++ K
Sbjct: 22  SSSEHPPY-----LLRFRTSHRENLRYLKTLGIIDPSTKPHKFPSPEAVDQVLSTVNFLK 76

Query: 608 SKGFSEPDFPRIAFLCPHLFTPTFDPITIEPVFDFLNLNLAASPEESRGLILKCPHILQS 429
           SKGFSEPDFPR++FLCP LF+   DP  IEPVFDFL L+LAAS +ES  LIL+CP IL S
Sbjct: 77  SKGFSEPDFPRLSFLCPKLFSSDSDPTDIEPVFDFLTLDLAASDQESCSLILRCPQILLS 136

Query: 428 DPELCLKPTLAYLKNLGIKQLKSPTTLNAHLLDTRVDKLEEKMRFLRGVGFSDEESRRVC 249
           D E CL+PTL YL+ LG+++L  PT+LNAHLL+TRV++L  K+RFLR VG S EES R C
Sbjct: 137 DVEYCLRPTLLYLRKLGVEKLNVPTSLNAHLLNTRVERLVAKIRFLRSVGLSYEESARAC 196

Query: 248 GRFPAIFGYGIEHNLKPKFEYLRREMKRNGREEVNKFPQYFGFSLENRIKPRHLHLKQRN 69
           GRFPA+FGY IE+NLKPKF YL REMKR+  EE+  FPQYF FSLENRI PRHLHL+QRN
Sbjct: 197 GRFPAVFGYSIENNLKPKFNYLVREMKRS-VEELKVFPQYFAFSLENRIMPRHLHLEQRN 255

Query: 68  VDAQVPLNRMMLWSDERFFKKW 3
           V  ++ L RM+LWSD++F+ KW
Sbjct: 256 V--RISLKRMLLWSDQKFYAKW 275


>ref|XP_004162746.1| PREDICTED: uncharacterized LOC101203623 [Cucumis sativus]
          Length = 282

 Score =  310 bits (793), Expect = 3e-82
 Identities = 157/273 (57%), Positives = 198/273 (72%), Gaps = 2/273 (0%)
 Frame = -1

Query: 815 YIFQTMLLLTPTLCSSSYRPPQPHRNGRLHFRTSHRKNLRYLKSLGIIQPATP--TPHTL 642
           Y F      TPT  S   R P  H    ++FRTSH +N+RYLKSL +I P T   +P  +
Sbjct: 16  YSFSHFTTPTPTTRS---RHPHLHPPS-INFRTSHHQNIRYLKSLNVIDPQTRFHSPDAV 71

Query: 641 SHILSTLHYFKSKGFSEPDFPRIAFLCPHLFTPTFDPITIEPVFDFLNLNLAASPEESRG 462
             IL+T+H+ KSKGFS+ DFPR+AFLCP+LFT  FD   I PVF FL  +++AS +ESRG
Sbjct: 72  HQILTTVHFLKSKGFSDSDFPRLAFLCPNLFTSNFDTTDIAPVFQFLATDISASLQESRG 131

Query: 461 LILKCPHILQSDPELCLKPTLAYLKNLGIKQLKSPTTLNAHLLDTRVDKLEEKMRFLRGV 282
           LIL+CP IL SD ELCLKPT  +LK LGI+ LKSP+ LN+HLL+TRV+KL  K+RF + +
Sbjct: 132 LILRCPKILFSDVELCLKPTHRFLKQLGIENLKSPSNLNSHLLNTRVEKLRSKIRFFQEI 191

Query: 281 GFSDEESRRVCGRFPAIFGYGIEHNLKPKFEYLRREMKRNGREEVNKFPQYFGFSLENRI 102
           GFS EE+ +VCGR PA+FGY ++ NLKPK+EY  +EM+R+  EE+  FPQYFGFSLE RI
Sbjct: 192 GFSHEEASKVCGRMPAMFGYSVKENLKPKYEYFVKEMERD-LEELKGFPQYFGFSLEGRI 250

Query: 101 KPRHLHLKQRNVDAQVPLNRMMLWSDERFFKKW 3
            PRHLHLKQR +   +PLN M+LWS  RF+ KW
Sbjct: 251 MPRHLHLKQRGL--HIPLNSMLLWSHNRFYSKW 281


>ref|XP_004137132.1| PREDICTED: uncharacterized protein LOC101203623 [Cucumis sativus]
          Length = 308

 Score =  310 bits (793), Expect = 3e-82
 Identities = 157/273 (57%), Positives = 198/273 (72%), Gaps = 2/273 (0%)
 Frame = -1

Query: 815 YIFQTMLLLTPTLCSSSYRPPQPHRNGRLHFRTSHRKNLRYLKSLGIIQPATP--TPHTL 642
           Y F      TPT  S   R P  H    ++FRTSH +N+RYLKSL +I P T   +P  +
Sbjct: 42  YSFSHFTTPTPTTRS---RHPHLHPPS-INFRTSHHQNIRYLKSLNVIDPQTRFHSPDAV 97

Query: 641 SHILSTLHYFKSKGFSEPDFPRIAFLCPHLFTPTFDPITIEPVFDFLNLNLAASPEESRG 462
             IL+T+H+ KSKGFS+ DFPR+AFLCP+LFT  FD   I PVF FL  +++AS +ESRG
Sbjct: 98  HQILTTVHFLKSKGFSDSDFPRLAFLCPNLFTSNFDTTDIAPVFQFLATDISASLQESRG 157

Query: 461 LILKCPHILQSDPELCLKPTLAYLKNLGIKQLKSPTTLNAHLLDTRVDKLEEKMRFLRGV 282
           LIL+CP IL SD ELCLKPT  +LK LGI+ LKSP+ LN+HLL+TRV+KL  K+RF + +
Sbjct: 158 LILRCPKILFSDVELCLKPTHRFLKQLGIENLKSPSNLNSHLLNTRVEKLRSKIRFFQEI 217

Query: 281 GFSDEESRRVCGRFPAIFGYGIEHNLKPKFEYLRREMKRNGREEVNKFPQYFGFSLENRI 102
           GFS EE+ +VCGR PA+FGY ++ NLKPK+EY  +EM+R+  EE+  FPQYFGFSLE RI
Sbjct: 218 GFSHEEASKVCGRMPAMFGYSVKENLKPKYEYFVKEMERD-LEELKGFPQYFGFSLEGRI 276

Query: 101 KPRHLHLKQRNVDAQVPLNRMMLWSDERFFKKW 3
            PRHLHLKQR +   +PLN M+LWS  RF+ KW
Sbjct: 277 MPRHLHLKQRGL--HIPLNSMLLWSHNRFYSKW 307


>ref|XP_002305414.1| predicted protein [Populus trichocarpa] gi|222848378|gb|EEE85925.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score =  296 bits (759), Expect = 3e-78
 Identities = 144/256 (56%), Positives = 189/256 (73%), Gaps = 5/256 (1%)
 Frame = -1

Query: 755 PQPHRNGRLHFRTSHRKNLRYLKSLGIIQPAT-----PTPHTLSHILSTLHYFKSKGFSE 591
           P PH +  + FRT+H +NLRYLK++G+I P +     PTP  +SHIL+TL +F+SKGF E
Sbjct: 27  PSPHPSHYIKFRTAHHENLRYLKAIGVIGPNSKSRQFPTPDAISHILATLKFFESKGFLE 86

Query: 590 PDFPRIAFLCPHLFTPTFDPITIEPVFDFLNLNLAASPEESRGLILKCPHILQSDPELCL 411
            DF R+ FLCP L +  FD   IEPVF FL  +L AS +ESRGL++KCP +L SD E  L
Sbjct: 87  TDFARLTFLCPELLSLNFDITDIEPVFQFLTDDLHASVQESRGLVIKCPRLLFSDVEYFL 146

Query: 410 KPTLAYLKNLGIKQLKSPTTLNAHLLDTRVDKLEEKMRFLRGVGFSDEESRRVCGRFPAI 231
           +PTL YL+ LG+ +L  P+ LNAHLL+ RV+K++ +  FLR +GFS +E+  +CGR PAI
Sbjct: 147 RPTLNYLRQLGVNKLNVPSNLNAHLLNIRVEKMQVRFEFLRSIGFSHDEAANICGRLPAI 206

Query: 230 FGYGIEHNLKPKFEYLRREMKRNGREEVNKFPQYFGFSLENRIKPRHLHLKQRNVDAQVP 51
           FGY IE+NL+PK EYL  EMKR+  +E+ +FPQYF FSLE +I PRHLHLK+RNV  ++ 
Sbjct: 207 FGYSIENNLRPKVEYLVDEMKRS-LDELKEFPQYFAFSLEKKIMPRHLHLKRRNV--KIK 263

Query: 50  LNRMMLWSDERFFKKW 3
           LNRM+LWSD RF+ KW
Sbjct: 264 LNRMLLWSDGRFYGKW 279


>ref|NP_188517.1| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|9294696|dbj|BAB03096.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|117958999|gb|ABK59696.1| At3g18870 [Arabidopsis
           thaliana] gi|332642641|gb|AEE76162.1| Mitochondrial
           transcription termination factor family protein
           [Arabidopsis thaliana]
          Length = 274

 Score =  293 bits (750), Expect = 3e-77
 Identities = 147/262 (56%), Positives = 189/262 (72%), Gaps = 5/262 (1%)
 Frame = -1

Query: 773 SSSYRPPQPHRNGRLH--FRTSHRKNLRYLKSLGIIQP---ATPTPHTLSHILSTLHYFK 609
           SS   PP P  +  L+  F+TSHR+NLR+L SLGI+       P  + LS ILS ++  K
Sbjct: 14  SSFSSPPSPSSSKPLYLKFQTSHRENLRHLSSLGIVPQNPRLAPPANDLSVILSAVNLLK 73

Query: 608 SKGFSEPDFPRIAFLCPHLFTPTFDPITIEPVFDFLNLNLAASPEESRGLILKCPHILQS 429
           SKG S+ DFPR+ FLCP LF+PTFD   ++PVFDFL   L AS EESRGLI+ CP+IL S
Sbjct: 74  SKGISDEDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGASAEESRGLIVNCPNILFS 133

Query: 428 DPELCLKPTLAYLKNLGIKQLKSPTTLNAHLLDTRVDKLEEKMRFLRGVGFSDEESRRVC 249
           D E CL+PTL YLK LG++ L   +  NAH+L+TRV+KL  KMRFL+ +GF  EE+ RVC
Sbjct: 134 DVEYCLRPTLVYLKELGVRNLNRASKTNAHVLNTRVEKLRAKMRFLKSIGFEHEEAARVC 193

Query: 248 GRFPAIFGYGIEHNLKPKFEYLRREMKRNGREEVNKFPQYFGFSLENRIKPRHLHLKQRN 69
           GR PAIFGY +E NL+PKFE+L  +M+R   EE+ KFPQYF FSL  RI+PRH HLK++N
Sbjct: 194 GRIPAIFGYSVEDNLRPKFEFLVYDMERE-LEELKKFPQYFAFSLGKRIRPRHWHLKKKN 252

Query: 68  VDAQVPLNRMMLWSDERFFKKW 3
           V  +V L+RM++W D++F+ KW
Sbjct: 253 V--RVSLSRMLMWGDQKFYSKW 272


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