BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00015733
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310026.1| hypothetical protein POPTRDRAFT_562705 [Popu...   114   8e-24
ref|NP_179581.2| RNA-dependent RNA polymerase-like protein [Arab...   112   2e-23
gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana]            112   2e-23
ref|NP_179582.2| RNA-dependent RNA polymerase family protein [Ar...   112   4e-23
gb|AAC62124.1| hypothetical protein [Arabidopsis thaliana]            112   4e-23

>ref|XP_002310026.1| hypothetical protein POPTRDRAFT_562705 [Populus trichocarpa]
           gi|222852929|gb|EEE90476.1| hypothetical protein
           POPTRDRAFT_562705 [Populus trichocarpa]
          Length = 406

 Score =  114 bits (285), Expect = 8e-24
 Identities = 62/120 (51%), Positives = 78/120 (65%)
 Frame = -3

Query: 362 KKLKPSTIQVRPSMIKVRKDSTLPDTKSFNSLEVVAVSHKPKAAKLSKQLIALLSIGGVP 183
           KKL   T+ VRPSMIKV  D  L +T S NSLE+V  S +PK   LSK LIALLS GGVP
Sbjct: 161 KKLNHRTLHVRPSMIKVETDPKLSNTFSKNSLEIVGTSCRPKKTFLSKNLIALLSYGGVP 220

Query: 182 DAYFLGLLESTLKDAQGVCFDPRTAFRVANTYQHIDDSGICIDMFGARIPLNEPYFQYRL 3
           + +F+G+L + L+DA G+  + + A RVA  Y  +DD+ I   M G  IPL EPY Q+ L
Sbjct: 221 EEFFMGILNNALEDAHGILSNKKAALRVALNYGDMDDN-IVATMIGCGIPLEEPYLQHHL 279


>ref|NP_179581.2| RNA-dependent RNA polymerase-like protein [Arabidopsis thaliana]
           gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
           Full=Probable RNA-dependent RNA polymerase 3;
           Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
           3 gi|330251848|gb|AEC06942.1| RNA-dependent RNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 992

 Score =  112 bits (281), Expect = 2e-23
 Identities = 59/120 (49%), Positives = 81/120 (67%)
 Frame = -3

Query: 362 KKLKPSTIQVRPSMIKVRKDSTLPDTKSFNSLEVVAVSHKPKAAKLSKQLIALLSIGGVP 183
           KKL P T+QVRPSMIKV +D TL +  +FNSLEVV  S+ P+ A+LS+ L+ALLS GGVP
Sbjct: 472 KKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTTSNPPRKARLSRNLVALLSYGGVP 531

Query: 182 DAYFLGLLESTLKDAQGVCFDPRTAFRVANTYQHIDDSGICIDMFGARIPLNEPYFQYRL 3
           + +FL +L +TL++++ + +  R AF+ A  Y    D     DM    IPL+EPY + RL
Sbjct: 532 NDFFLNILRNTLEESKTIFYSERAAFKAAINY---GDDQYTADMILVGIPLDEPYLKDRL 588


>gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana]
          Length = 966

 Score =  112 bits (281), Expect = 2e-23
 Identities = 59/120 (49%), Positives = 81/120 (67%)
 Frame = -3

Query: 362 KKLKPSTIQVRPSMIKVRKDSTLPDTKSFNSLEVVAVSHKPKAAKLSKQLIALLSIGGVP 183
           KKL P T+QVRPSMIKV +D TL +  +FNSLEVV  S+ P+ A+LS+ L+ALLS GGVP
Sbjct: 446 KKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTTSNPPRKARLSRNLVALLSYGGVP 505

Query: 182 DAYFLGLLESTLKDAQGVCFDPRTAFRVANTYQHIDDSGICIDMFGARIPLNEPYFQYRL 3
           + +FL +L +TL++++ + +  R AF+ A  Y    D     DM    IPL+EPY + RL
Sbjct: 506 NDFFLNILRNTLEESKTIFYSERAAFKAAINY---GDDQYTADMILVGIPLDEPYLKDRL 562


>ref|NP_179582.2| RNA-dependent RNA polymerase family protein [Arabidopsis thaliana]
           gi|322967571|sp|O82189.2|RDR4_ARATH RecName:
           Full=Probable RNA-dependent RNA polymerase 4;
           Short=AtRDRP4; AltName: Full=RNA-directed RNA polymerase
           4 gi|330251849|gb|AEC06943.1| RNA-dependent RNA
           polymerase family protein [Arabidopsis thaliana]
          Length = 927

 Score =  112 bits (279), Expect = 4e-23
 Identities = 61/120 (50%), Positives = 80/120 (66%)
 Frame = -3

Query: 362 KKLKPSTIQVRPSMIKVRKDSTLPDTKSFNSLEVVAVSHKPKAAKLSKQLIALLSIGGVP 183
           K L P T+QVRPSMIKV KD  L +  +FNSLEVV  S+ PK AKLSK L+ALLS GGVP
Sbjct: 463 KNLPPQTVQVRPSMIKVYKDKNLSNFSTFNSLEVVTTSNPPKRAKLSKNLVALLSYGGVP 522

Query: 182 DAYFLGLLESTLKDAQGVCFDPRTAFRVANTYQHIDDSGICIDMFGARIPLNEPYFQYRL 3
           + +FL +L +TL+  + + F  R A + A  Y ++DD    + M  A IPL+EPY ++ L
Sbjct: 523 NDFFLDILLNTLEKKKTIFFKVRAAGKAALHYGNMDDKN-ALQMIMAGIPLDEPYLKHYL 581


>gb|AAC62124.1| hypothetical protein [Arabidopsis thaliana]
          Length = 905

 Score =  112 bits (279), Expect = 4e-23
 Identities = 61/120 (50%), Positives = 80/120 (66%)
 Frame = -3

Query: 362 KKLKPSTIQVRPSMIKVRKDSTLPDTKSFNSLEVVAVSHKPKAAKLSKQLIALLSIGGVP 183
           K L P T+QVRPSMIKV KD  L +  +FNSLEVV  S+ PK AKLSK L+ALLS GGVP
Sbjct: 468 KNLPPQTVQVRPSMIKVYKDKNLSNFSTFNSLEVVTTSNPPKRAKLSKNLVALLSYGGVP 527

Query: 182 DAYFLGLLESTLKDAQGVCFDPRTAFRVANTYQHIDDSGICIDMFGARIPLNEPYFQYRL 3
           + +FL +L +TL+  + + F  R A + A  Y ++DD    + M  A IPL+EPY ++ L
Sbjct: 528 NDFFLDILLNTLEKKKTIFFKVRAAGKAALHYGNMDDKN-ALQMIMAGIPLDEPYLKHYL 586