BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00015703
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, puta...   301   7e-80
emb|CBI40277.3| unnamed protein product [Vitis vinifera]              300   2e-79
ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II su...   300   2e-79
emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]   300   2e-79
ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerase II su...   299   5e-79

>ref|XP_002518700.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
           gi|223542081|gb|EEF43625.1| DNA-directed RNA polymerase
           II subunit, putative [Ricinus communis]
          Length = 318

 Score =  301 bits (772), Expect = 7e-80
 Identities = 151/172 (87%), Positives = 164/172 (95%)
 Frame = -2

Query: 742 DQRGITIVKLRKGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEEMMETLSLE 563
           +QRGI IVKLR+GQELRLRAIARKGIGKDHAKWSPAATVTFMYEP+IHINE++ME+LSLE
Sbjct: 147 EQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPDIHINEDLMESLSLE 206

Query: 562 EKTSVVESSPTKVFGINPHTQQVEVVDPEAYTYDDEVLKKVEAMGKPGLVEIYAKEDSFI 383
           EK S VESSPTKVF I+P+TQQV VVDPEAYTYD+EV+KK E+MGKPGLV I AKEDSFI
Sbjct: 207 EKQSWVESSPTKVFDIDPNTQQVVVVDPEAYTYDEEVIKKAESMGKPGLVNIQAKEDSFI 266

Query: 382 FTVESTGAVKASQLVLNAIEVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 227
           FTVESTGA+KASQLVLNAIE+LKQKLDAVRLSEDTVEADDQFGELGAHMRGG
Sbjct: 267 FTVESTGAIKASQLVLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318


>emb|CBI40277.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score =  300 bits (769), Expect = 2e-79
 Identities = 152/172 (88%), Positives = 163/172 (94%)
 Frame = -2

Query: 742 DQRGITIVKLRKGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEEMMETLSLE 563
           D++GI IVKLR+GQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINE++ME+L+LE
Sbjct: 35  DKKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLTLE 94

Query: 562 EKTSVVESSPTKVFGINPHTQQVEVVDPEAYTYDDEVLKKVEAMGKPGLVEIYAKEDSFI 383
           EKTS VESSPTKVF I+  +QQV V D EAYTYDDEVLKK EAMGKPGLVEIYAKEDSFI
Sbjct: 95  EKTSWVESSPTKVFDIDASSQQVVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFI 154

Query: 382 FTVESTGAVKASQLVLNAIEVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 227
           FTVESTGA+KASQLVLNAI+VLKQKLDAVRLSEDTVEADDQFGELGAHMRGG
Sbjct: 155 FTVESTGAIKASQLVLNAIDVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 206


>ref|XP_002285322.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A [Vitis
           vinifera]
          Length = 318

 Score =  300 bits (769), Expect = 2e-79
 Identities = 152/172 (88%), Positives = 163/172 (94%)
 Frame = -2

Query: 742 DQRGITIVKLRKGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEEMMETLSLE 563
           D++GI IVKLR+GQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINE++ME+L+LE
Sbjct: 147 DKKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLTLE 206

Query: 562 EKTSVVESSPTKVFGINPHTQQVEVVDPEAYTYDDEVLKKVEAMGKPGLVEIYAKEDSFI 383
           EKTS VESSPTKVF I+  +QQV V D EAYTYDDEVLKK EAMGKPGLVEIYAKEDSFI
Sbjct: 207 EKTSWVESSPTKVFDIDASSQQVVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFI 266

Query: 382 FTVESTGAVKASQLVLNAIEVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 227
           FTVESTGA+KASQLVLNAI+VLKQKLDAVRLSEDTVEADDQFGELGAHMRGG
Sbjct: 267 FTVESTGAIKASQLVLNAIDVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318


>emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis vinifera]
          Length = 318

 Score =  300 bits (769), Expect = 2e-79
 Identities = 152/172 (88%), Positives = 163/172 (94%)
 Frame = -2

Query: 742 DQRGITIVKLRKGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEEMMETLSLE 563
           D++GI IVKLR+GQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINE++ME+L+LE
Sbjct: 147 DKKGIIIVKLRRGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMESLTLE 206

Query: 562 EKTSVVESSPTKVFGINPHTQQVEVVDPEAYTYDDEVLKKVEAMGKPGLVEIYAKEDSFI 383
           EKTS VESSPTKVF I+  +QQV V D EAYTYDDEVLKK EAMGKPGLVEIYAKEDSFI
Sbjct: 207 EKTSWVESSPTKVFDIDASSQQVVVADAEAYTYDDEVLKKAEAMGKPGLVEIYAKEDSFI 266

Query: 382 FTVESTGAVKASQLVLNAIEVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 227
           FTVESTGA+KASQLVLNAI+VLKQKLDAVRLSEDTVEADDQFGELGAHMRGG
Sbjct: 267 FTVESTGAIKASQLVLNAIDVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 318


>ref|XP_003556247.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB3-A-like
           [Glycine max]
          Length = 320

 Score =  299 bits (765), Expect = 5e-79
 Identities = 150/176 (85%), Positives = 165/176 (93%)
 Frame = -2

Query: 754 ENPEDQRGITIVKLRKGQELRLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEEMMET 575
           ++P++ RGI IVKLR+GQEL+LRAIARKGIGKDHAKWSPAATVTFMYEPEIHINE++MET
Sbjct: 145 DSPDNNRGIIIVKLRRGQELKLRAIARKGIGKDHAKWSPAATVTFMYEPEIHINEDLMET 204

Query: 574 LSLEEKTSVVESSPTKVFGINPHTQQVEVVDPEAYTYDDEVLKKVEAMGKPGLVEIYAKE 395
           L+LEEK   V+SSPT+VF I+P TQQV VVD EAYTYDDEVLKK EAMGKPGLVEI A++
Sbjct: 205 LTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYTYDDEVLKKAEAMGKPGLVEIIARQ 264

Query: 394 DSFIFTVESTGAVKASQLVLNAIEVLKQKLDAVRLSEDTVEADDQFGELGAHMRGG 227
           DSFIFTVESTGAVKASQLVLNAIE+LKQKLDAVRLSEDTVEADDQFGELGAHMRGG
Sbjct: 265 DSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLSEDTVEADDQFGELGAHMRGG 320