BLASTX nr result

ID: Atractylodes22_contig00015582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00015582
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311039.1| predicted protein [Populus trichocarpa] gi|2...   112   6e-23
emb|CBI40211.3| unnamed protein product [Vitis vinifera]              105   6e-21
ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vit...   105   6e-21
ref|XP_004140896.1| PREDICTED: RING-H2 finger protein ATL7-like ...   104   1e-20
ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|2...    99   7e-19

>ref|XP_002311039.1| predicted protein [Populus trichocarpa] gi|222850859|gb|EEE88406.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  112 bits (279), Expect = 6e-23
 Identities = 57/142 (40%), Positives = 77/142 (54%), Gaps = 20/142 (14%)
 Frame = -2

Query: 585 CVVCLSDYHADDTLRILPFCGHFFHSTCIDIWLQQHCTCPVCRVSLREVFERRYSMQPM- 409
           C +CL++YH DD LRILP+CGH FH TCIDIWLQQH TCPVCR+SLRE  E++  MQP+ 
Sbjct: 85  CTICLAEYHGDDILRILPYCGHSFHVTCIDIWLQQHSTCPVCRISLREFPEKKRVMQPLF 144

Query: 408 -------------------XXXXXXXXXXXXXXSHRTDPSNDGQLQSNDNEQEARQNNSN 286
                                            +H TDP  D    S  +E+E  +N+  
Sbjct: 145 SSAIRSRNGTETFDSHSYNYMLTEHGISPRSYNNHGTDPIQDNHCASGGDEEEGGENSPP 204

Query: 285 MNENSSTGSKNPVNKQFESPSD 220
           + E++   +K+  +K  ESPS+
Sbjct: 205 LTESNQI-AKDIADKHVESPSN 225


>emb|CBI40211.3| unnamed protein product [Vitis vinifera]
          Length = 209

 Score =  105 bits (262), Expect = 6e-21
 Identities = 57/142 (40%), Positives = 75/142 (52%), Gaps = 20/142 (14%)
 Frame = -2

Query: 585 CVVCLSDYHADDTLRILPFCGHFFHSTCIDIWLQQHCTCPVCRVSLREVFERRYSMQPM- 409
           C VCL +Y A+D LRILP+CGHFFH TCIDIWLQQH TCPVCR+SL E  ER+  MQPM 
Sbjct: 68  CTVCLVEYQAEDILRILPYCGHFFHVTCIDIWLQQHSTCPVCRISLWEFPERKCLMQPMF 127

Query: 408 -------------------XXXXXXXXXXXXXXSHRTDPSNDGQLQSNDNEQEARQNNSN 286
                                            +HR DP  + Q     +  EA+++   
Sbjct: 128 SSAVRSHFGMESRNTHSYNCLSTGRGFSSRSHDNHRMDPIQEDQFGPGGDGAEAQESTLP 187

Query: 285 MNENSSTGSKNPVNKQFESPSD 220
           + + ++  +K+  NK  ESPS+
Sbjct: 188 LTD-ANQPAKDSENKHIESPSN 208


>ref|XP_002270953.1| PREDICTED: RING-H2 finger protein ATL38 [Vitis vinifera]
          Length = 228

 Score =  105 bits (262), Expect = 6e-21
 Identities = 57/142 (40%), Positives = 75/142 (52%), Gaps = 20/142 (14%)
 Frame = -2

Query: 585 CVVCLSDYHADDTLRILPFCGHFFHSTCIDIWLQQHCTCPVCRVSLREVFERRYSMQPM- 409
           C VCL +Y A+D LRILP+CGHFFH TCIDIWLQQH TCPVCR+SL E  ER+  MQPM 
Sbjct: 87  CTVCLVEYQAEDILRILPYCGHFFHVTCIDIWLQQHSTCPVCRISLWEFPERKCLMQPMF 146

Query: 408 -------------------XXXXXXXXXXXXXXSHRTDPSNDGQLQSNDNEQEARQNNSN 286
                                            +HR DP  + Q     +  EA+++   
Sbjct: 147 SSAVRSHFGMESRNTHSYNCLSTGRGFSSRSHDNHRMDPIQEDQFGPGGDGAEAQESTLP 206

Query: 285 MNENSSTGSKNPVNKQFESPSD 220
           + + ++  +K+  NK  ESPS+
Sbjct: 207 LTD-ANQPAKDSENKHIESPSN 227


>ref|XP_004140896.1| PREDICTED: RING-H2 finger protein ATL7-like [Cucumis sativus]
           gi|449528792|ref|XP_004171387.1| PREDICTED: RING-H2
           finger protein ATL7-like [Cucumis sativus]
          Length = 218

 Score =  104 bits (259), Expect = 1e-20
 Identities = 57/136 (41%), Positives = 74/136 (54%), Gaps = 14/136 (10%)
 Frame = -2

Query: 585 CVVCLSDYHADDTLRILPFCGHFFHSTCIDIWLQQHCTCPVCRVSLREVFERRYSMQPMX 406
           C VCL+DYH++D LRILP+CGH FH  CIDIWL QH TCPVCR+SLREV +++ +MQP+ 
Sbjct: 87  CTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQHSTCPVCRLSLREVQDKKRTMQPLF 146

Query: 405 XXXXXXXXXXXXXSHRTDPSNDGQLQSNDNEQEARQNNSNMNENSST------------- 265
                          R  P  D  L++N  EQ  ++N+     N +              
Sbjct: 147 SSAIRALNSDPC---RGFPLRD--LENNGLEQPIQENHYTTGTNGAADPIENASPFIEGN 201

Query: 264 -GSKNPVNKQFESPSD 220
             SK   NK  ESPS+
Sbjct: 202 QNSKGCRNKNVESPSN 217


>ref|XP_002315453.1| predicted protein [Populus trichocarpa] gi|222864493|gb|EEF01624.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 39/59 (66%), Positives = 49/59 (83%)
 Frame = -2

Query: 585 CVVCLSDYHADDTLRILPFCGHFFHSTCIDIWLQQHCTCPVCRVSLREVFERRYSMQPM 409
           C VCL++YH  D LRILP+CGH FH TCID+WLQQH TCP+CR+SLRE  E++ +MQP+
Sbjct: 87  CTVCLAEYHGKDILRILPYCGHSFHVTCIDMWLQQHSTCPMCRISLREFPEKKCAMQPL 145


Top