BLASTX nr result

ID: Atractylodes22_contig00015553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00015553
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAI94495.1| pectate lyase [Dianthus caryophyllus]                  89   5e-16
ref|XP_002314576.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
ref|XP_002887143.1| pectate lyase family protein [Arabidopsis ly...    87   1e-15
gb|AAG28907.1|AC008113_23 F12A21.12 [Arabidopsis thaliana]             87   2e-15
gb|AAM67091.1| putative pectate lyase [Arabidopsis thaliana]           87   2e-15

>dbj|BAI94495.1| pectate lyase [Dianthus caryophyllus]
          Length = 407

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/67 (61%), Positives = 47/67 (70%)
 Frame = -1

Query: 432 APENDWKSWNWRSEGDLMLNGAFFTPXXXXXXXXXXXXXXXXARPSSIVSALTTNAGALV 253
           APE +WK+WNWRSEGDLMLNGAFFTP                ARPS++V  LT +AG+LV
Sbjct: 341 APEGEWKNWNWRSEGDLMLNGAFFTPSGAGASSSYARASSLGARPSTLVGTLTGSAGSLV 400

Query: 252 CRKGSRC 232
           CRKGSRC
Sbjct: 401 CRKGSRC 407


>ref|XP_002314576.1| predicted protein [Populus trichocarpa] gi|222863616|gb|EEF00747.1|
           predicted protein [Populus trichocarpa]
          Length = 402

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/67 (59%), Positives = 47/67 (70%)
 Frame = -1

Query: 432 APENDWKSWNWRSEGDLMLNGAFFTPXXXXXXXXXXXXXXXXARPSSIVSALTTNAGALV 253
           AP++ WK WNWRS+GDLMLNGAFFTP                ARPSS+VS++T  AGALV
Sbjct: 336 APQSQWKRWNWRSDGDLMLNGAFFTPSGAGASSSYARASSLSARPSSLVSSITAGAGALV 395

Query: 252 CRKGSRC 232
           C+KGSRC
Sbjct: 396 CKKGSRC 402


>ref|XP_002887143.1| pectate lyase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332984|gb|EFH63402.1| pectate lyase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 408

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/67 (59%), Positives = 47/67 (70%)
 Frame = -1

Query: 432 APENDWKSWNWRSEGDLMLNGAFFTPXXXXXXXXXXXXXXXXARPSSIVSALTTNAGALV 253
           AP++ WK WNWRSEGDL LNGAFFTP                ARPSS+V+++T+NAGAL 
Sbjct: 342 APQSKWKKWNWRSEGDLFLNGAFFTPSGGGASSSYAKASSLSARPSSLVASVTSNAGALF 401

Query: 252 CRKGSRC 232
           CRKGSRC
Sbjct: 402 CRKGSRC 408


>gb|AAG28907.1|AC008113_23 F12A21.12 [Arabidopsis thaliana]
          Length = 392

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/67 (59%), Positives = 46/67 (68%)
 Frame = -1

Query: 432 APENDWKSWNWRSEGDLMLNGAFFTPXXXXXXXXXXXXXXXXARPSSIVSALTTNAGALV 253
           AP + WK WNWRSEGDL LNGAFFTP                ARPSS+V+++T+NAGAL 
Sbjct: 326 APRSKWKKWNWRSEGDLFLNGAFFTPSGGGASSSYAKASSLSARPSSLVASVTSNAGALF 385

Query: 252 CRKGSRC 232
           CRKGSRC
Sbjct: 386 CRKGSRC 392


>gb|AAM67091.1| putative pectate lyase [Arabidopsis thaliana]
          Length = 406

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/67 (59%), Positives = 46/67 (68%)
 Frame = -1

Query: 432 APENDWKSWNWRSEGDLMLNGAFFTPXXXXXXXXXXXXXXXXARPSSIVSALTTNAGALV 253
           AP + WK WNWRSEGDL LNGAFFTP                ARPSS+V+++T+NAGAL 
Sbjct: 340 APRSKWKKWNWRSEGDLFLNGAFFTPSGGGASSSYAKASSLSARPSSLVASVTSNAGALF 399

Query: 252 CRKGSRC 232
           CRKGSRC
Sbjct: 400 CRKGSRC 406