BLASTX nr result

ID: Atractylodes22_contig00015546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00015546
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus tric...    67   2e-09
ref|XP_002336335.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vi...    62   4e-08
emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]    62   4e-08
emb|CAN75767.1| hypothetical protein VITISV_032562 [Vitis vinifera]    58   9e-07

>ref|XP_002329162.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222870943|gb|EEF08074.1| tir-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1203

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 7/99 (7%)
 Frame = +2

Query: 5    GTAITKLPSFVYSQCNLQVLRIGPHGRIQSRR-----WTPISHPSCLPSKMQHSRSLVIP 169
            GTAI + P  ++S  NL++L    HG  +S R     W  +  P  +P K  +S SLV+P
Sbjct: 817  GTAIREPPVSIFSLKNLKILSF--HGCAESSRSTTNIWQRLMFP-LMPGKRANSTSLVLP 873

Query: 170  SLDGLRSLRELQLGNCNILE--VPNSIGGLSCLQSLDLS 280
            SL GL SL  L L NCN+ E  VPN IG LS L+ L+LS
Sbjct: 874  SLSGLSSLTRLGLSNCNLGEGAVPNDIGYLSSLRQLNLS 912


>ref|XP_002336335.1| predicted protein [Populus trichocarpa] gi|222834747|gb|EEE73210.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 45/99 (45%), Positives = 58/99 (58%), Gaps = 7/99 (7%)
 Frame = +2

Query: 5   GTAITKLPSFVYSQCNLQVLRIGPHGRIQSRR-----WTPISHPSCLPSKMQHSRSLVIP 169
           GTAI + P  ++S  NL++L    HG  +S R     W  +  P  +P K  +S SLV+P
Sbjct: 144 GTAIREPPVSIFSLKNLKILSF--HGCAESSRSTTNIWQRLMFP-LMPGKRANSTSLVLP 200

Query: 170 SLDGLRSLRELQLGNCNILE--VPNSIGGLSCLQSLDLS 280
           SL GL SL  L L NCN+ E  VPN IG LS L+ L+LS
Sbjct: 201 SLSGLSSLTRLGLSNCNLGEGAVPNDIGYLSSLRQLNLS 239


>ref|XP_002272034.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1233

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
 Frame = +2

Query: 2    DGTAITKLPSFVYSQCNLQVLRIGPHGRIQSRRWTPISHPSCLPSKMQHSRSLVIPSLDG 181
            DGT + + PS +    NL++L  G    + S  W+ +     LP K   +  L +PSL G
Sbjct: 806  DGTLVRQPPSSIVLLRNLEILSFGGCKGLASNSWSSLFSFWLLPRKSSDTIGLQLPSLSG 865

Query: 182  LRSLRELQLGNCNILE--VPNSIGGLSCLQSLDLS 280
            L SLREL + +CN++E  VP  I  LS L++L+LS
Sbjct: 866  LCSLRELDISDCNLMEGAVPFDICNLSSLETLNLS 900


>emb|CAN61853.1| hypothetical protein VITISV_027841 [Vitis vinifera]
          Length = 1244

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
 Frame = +2

Query: 2    DGTAITKLPSFVYSQCNLQVLRIGPHGRIQSRRWTPISHPSCLPSKMQHSRSLVIPSLDG 181
            DGT + + PS +    NL++L  G    + S  W+ +     LP K   +  L +PSL G
Sbjct: 774  DGTLVRQPPSSIVLLRNLEILSFGGCKGLASNSWSSLFSFWLLPRKSSDTIGLQLPSLSG 833

Query: 182  LRSLRELQLGNCNILE--VPNSIGGLSCLQSLDLS 280
            L SLREL + +CN++E  VP  I  LS L++L+LS
Sbjct: 834  LCSLRELDISDCNLMEGAVPFDICNLSSLETLNLS 868


>emb|CAN75767.1| hypothetical protein VITISV_032562 [Vitis vinifera]
          Length = 600

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
 Frame = +2

Query: 5   GTAITKLPSFVYSQCNLQVLRIGPHGRIQSRRWTPISHPSCLPSKMQHSRSLVIPSLDGL 184
           GTAI +LP  +    NL+VL       ++S     +     LP+++  SR   + S  GL
Sbjct: 430 GTAIKELPPSISLLENLEVLSFEGCKGLESNPRNSLPSFQLLPAEIGRSRGFQLHSFFGL 489

Query: 185 RSLRELQLGNCNILE--VPNSIGGLSCLQSLDLS 280
           RSLR+L L +CNILE  +PN    L  L+ LDLS
Sbjct: 490 RSLRKLNLSDCNILEGAIPNDFSSLCSLEYLDLS 523


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