BLASTX nr result

ID: Atractylodes22_contig00015525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00015525
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882511.1| structural constituent of ribosome [Arabidop...    56   3e-06
ref|XP_002865669.1| 60S ribosomal protein L13A [Arabidopsis lyra...    55   8e-06
ref|XP_002863167.1| predicted protein [Arabidopsis lyrata subsp....    55   8e-06
dbj|BAF01678.1| 60S ribosomal protein L13a [Arabidopsis thaliana]      55   8e-06
ref|NP_199687.1| 60S ribosomal protein L13a-4 [Arabidopsis thali...    55   8e-06

>ref|XP_002882511.1| structural constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata] gi|297328351|gb|EFH58770.1| structural
           constituent of ribosome [Arabidopsis lyrata subsp.
           lyrata]
          Length = 207

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = -3

Query: 213 KQLNKLRAKAEKVAEEKLGAQLEILAPVTY 124
           KQLNKLRAKAEKVAEEKLG+QLE+LAPV Y
Sbjct: 178 KQLNKLRAKAEKVAEEKLGSQLEVLAPVKY 207


>ref|XP_002865669.1| 60S ribosomal protein L13A [Arabidopsis lyrata subsp. lyrata]
           gi|297311504|gb|EFH41928.1| 60S ribosomal protein L13A
           [Arabidopsis lyrata subsp. lyrata]
          Length = 206

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -3

Query: 213 KQLNKLRAKAEKVAEEKLGAQLEILAPVTY 124
           KQLNKLR KAEKVAEEKLGAQL+ILAPV Y
Sbjct: 177 KQLNKLRVKAEKVAEEKLGAQLDILAPVKY 206


>ref|XP_002863167.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309001|gb|EFH39426.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 206

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = -3

Query: 213 KQLNKLRAKAEKVAEEKLGAQLEILAPVTY 124
           KQLNKLRAKAEKVAEEKLG+QL++LAPV Y
Sbjct: 177 KQLNKLRAKAEKVAEEKLGSQLDVLAPVKY 206


>dbj|BAF01678.1| 60S ribosomal protein L13a [Arabidopsis thaliana]
          Length = 41

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -3

Query: 213 KQLNKLRAKAEKVAEEKLGAQLEILAPVTY 124
           KQLNKLR KAEKVAEEKLGAQL+ILAPV Y
Sbjct: 12  KQLNKLRVKAEKVAEEKLGAQLDILAPVKY 41


>ref|NP_199687.1| 60S ribosomal protein L13a-4 [Arabidopsis thaliana]
           gi|145334783|ref|NP_001078737.1| 60S ribosomal protein
           L13a-4 [Arabidopsis thaliana]
           gi|17865558|sp|Q9FKC0.1|R13A4_ARATH RecName: Full=60S
           ribosomal protein L13a-4 gi|9758875|dbj|BAB09429.1| 60S
           ribosomal protein L13a [Arabidopsis thaliana]
           gi|19699305|gb|AAL91263.1| AT5g48760/K24G6_9
           [Arabidopsis thaliana] gi|21593767|gb|AAM65734.1| 60S
           ribosomal protein L13a [Arabidopsis thaliana]
           gi|21689627|gb|AAM67435.1| At5g48760/K24G6_9
           [Arabidopsis thaliana] gi|332008337|gb|AED95720.1| 60S
           ribosomal protein L13a-4 [Arabidopsis thaliana]
           gi|332008338|gb|AED95721.1| 60S ribosomal protein L13a-4
           [Arabidopsis thaliana]
          Length = 206

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = -3

Query: 213 KQLNKLRAKAEKVAEEKLGAQLEILAPVTY 124
           KQLNKLR KAEKVAEEKLGAQL+ILAPV Y
Sbjct: 177 KQLNKLRVKAEKVAEEKLGAQLDILAPVKY 206


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