BLASTX nr result
ID: Atractylodes22_contig00015445
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00015445
(422 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containi... 187 1e-45
emb|CBI21289.3| unnamed protein product [Vitis vinifera] 187 1e-45
ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|2... 177 1e-42
ref|XP_002512857.1| pentatricopeptide repeat-containing protein,... 172 3e-41
ref|XP_003624481.1| Pentatricopeptide repeat-containing protein ... 167 1e-39
>ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 187 bits (474), Expect = 1e-45
Identities = 90/113 (79%), Positives = 100/113 (88%)
Frame = +1
Query: 82 SNPNLATFFNKYVDTTNVWSWNSVIADLARAGDSVDSLLAFAAMRKLSLTPNRSTFPCTI 261
+NPNL T FNKYVD TNV+SWNSVIA+LAR+GDSV++L AF++MRKLSL PNRSTFPC I
Sbjct: 100 NNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAI 159
Query: 262 KSCSALFDLHSGKQAHLQALIFGFHNDLFVSSALIDMYSKCGHLDDARNLFDE 420
KSCSAL DLHSG+QAH QALIFGF DLFVSSAL+DMYSKCG L DAR LFDE
Sbjct: 160 KSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDE 212
Score = 60.8 bits (146), Expect = 1e-07
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = +1
Query: 130 NVWSWNSVIADLARAGDSVDSLLAFAAMRKLS-LTPNRSTFPCTIKSCSALFDLHSGKQA 306
+V SWNS+IA A+ G S +S+ F M K + N T + +C+ GK
Sbjct: 326 DVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCI 385
Query: 307 HLQALIFGFHNDLFVSSALIDMYSKCGHLDDARNLFD 417
H Q + G +++FV +++IDMY KCG ++ AR FD
Sbjct: 386 HDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFD 422
>emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 187 bits (474), Expect = 1e-45
Identities = 90/113 (79%), Positives = 100/113 (88%)
Frame = +1
Query: 82 SNPNLATFFNKYVDTTNVWSWNSVIADLARAGDSVDSLLAFAAMRKLSLTPNRSTFPCTI 261
+NPNL T FNKYVD TNV+SWNSVIA+LAR+GDSV++L AF++MRKLSL PNRSTFPC I
Sbjct: 24 NNPNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAI 83
Query: 262 KSCSALFDLHSGKQAHLQALIFGFHNDLFVSSALIDMYSKCGHLDDARNLFDE 420
KSCSAL DLHSG+QAH QALIFGF DLFVSSAL+DMYSKCG L DAR LFDE
Sbjct: 84 KSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDE 136
Score = 60.8 bits (146), Expect = 1e-07
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = +1
Query: 130 NVWSWNSVIADLARAGDSVDSLLAFAAMRKLS-LTPNRSTFPCTIKSCSALFDLHSGKQA 306
+V SWNS+IA A+ G S +S+ F M K + N T + +C+ GK
Sbjct: 172 DVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCI 231
Query: 307 HLQALIFGFHNDLFVSSALIDMYSKCGHLDDARNLFD 417
H Q + G +++FV +++IDMY KCG ++ AR FD
Sbjct: 232 HDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFD 268
>ref|XP_002300144.1| predicted protein [Populus trichocarpa] gi|222847402|gb|EEE84949.1|
predicted protein [Populus trichocarpa]
Length = 666
Score = 177 bits (448), Expect = 1e-42
Identities = 89/135 (65%), Positives = 106/135 (78%), Gaps = 4/135 (2%)
Frame = +1
Query: 28 TIKAAAASSELTINHFSRS----NPNLATFFNKYVDTTNVWSWNSVIADLARAGDSVDSL 195
+++ S ++ NHFS + N NL T FNKY D T+V+SWNS+IA+LAR GDS +SL
Sbjct: 8 SLQLLTISFKIHKNHFSTTAAATNTNLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESL 67
Query: 196 LAFAAMRKLSLTPNRSTFPCTIKSCSALFDLHSGKQAHLQALIFGFHNDLFVSSALIDMY 375
AF+ MRKL + PNRSTFPC IKSCSALFDL+SGKQAH QAL+FGF +DLFVSSALIDMY
Sbjct: 68 RAFSWMRKLDIKPNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMY 127
Query: 376 SKCGHLDDARNLFDE 420
SKCG L +AR LFDE
Sbjct: 128 SKCGKLSNARVLFDE 142
Score = 58.5 bits (140), Expect = 5e-07
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +1
Query: 130 NVWSWNSVIADLARAGDSVDSLLAFAAMRKLSLTP-NRSTFPCTIKSCSALFDLHSGKQA 306
+V SWNS+IA A+ G S D+ F M K N T + +C+ L G
Sbjct: 257 DVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCL 316
Query: 307 HLQALIFGFHNDLFVSSALIDMYSKCGHLDDARNLFD 417
H Q + G+ N++ +++++IDMY KCG + ARN FD
Sbjct: 317 HDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFD 353
>ref|XP_002512857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547868|gb|EEF49360.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 454
Score = 172 bits (435), Expect = 3e-41
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +1
Query: 91 NLATFFNKYVDTTNVWSWNSVIADLARAGDSVDSLLAFAAMRKLSLTPNRSTFPCTIKSC 270
NL T+FNKY + TNV+SWNS+IADLAR+GDS++SL AF +MRKL+L PNRSTFPC IK+C
Sbjct: 33 NLRTWFNKYFEKTNVFSWNSLIADLARSGDSIESLRAFYSMRKLNLKPNRSTFPCAIKAC 92
Query: 271 SALFDLHSGKQAHLQALIFGFHNDLFVSSALIDMYSKCGHLDDARNLFDE 420
S+L DLH GKQ H QAL+FGF +DLFVSSAL+DMYSKCG L DAR LFDE
Sbjct: 93 SSLLDLHWGKQTHQQALVFGFESDLFVSSALVDMYSKCGRLSDARILFDE 142
Score = 57.4 bits (137), Expect = 1e-06
Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Frame = +1
Query: 139 SWNSVIADLARAGDSVDSLLAFAAMRKLSLTP-NRSTFPCTIKSCSALFDLHSGKQAHLQ 315
SWNS+IA A+ G S ++ F M K N T + +C+ L +GK H Q
Sbjct: 260 SWNSMIAVYAQNGLSSEAFEVFHGMIKYGYVKYNAVTLSTLLLACAHSGALQTGKCIHDQ 319
Query: 316 ALIFGFHNDLFVSSALIDMYSKCGHLDDARNLFD 417
+ G +++ V ++LIDMY KCG + AR FD
Sbjct: 320 VIRMGLDDNVIVGTSLIDMYCKCGRVQMARKTFD 353
>ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 672
Score = 167 bits (422), Expect = 1e-39
Identities = 77/110 (70%), Positives = 96/110 (87%)
Frame = +1
Query: 91 NLATFFNKYVDTTNVWSWNSVIADLARAGDSVDSLLAFAAMRKLSLTPNRSTFPCTIKSC 270
NL + F KYVD T+V+SWNS+IAD AR+GDS+ +L AF++MRKLSL PNRSTFPCTIKSC
Sbjct: 37 NLRSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSC 96
Query: 271 SALFDLHSGKQAHLQALIFGFHNDLFVSSALIDMYSKCGHLDDARNLFDE 420
S+L+DL +GKQ H QA +FG+ +D+FV+SALIDMYSKCG+L+DAR LFDE
Sbjct: 97 SSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDE 146
Score = 60.1 bits (144), Expect = 2e-07
Identities = 35/101 (34%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Frame = +1
Query: 118 VDTTNVWSWNSVIADLARAGDSVDSLLAFAAMRKLS-LTPNRSTFPCTIKSCSALFDLHS 294
++ T+V SWNS+IA A+ G SV++ F+ M K + N T + +C+ L
Sbjct: 259 MEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQI 318
Query: 295 GKQAHLQALIFGFHNDLFVSSALIDMYSKCGHLDDARNLFD 417
GK H Q + ++L V ++++DMY KCG ++ AR FD
Sbjct: 319 GKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFD 359