BLASTX nr result

ID: Atractylodes22_contig00015323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00015323
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC24710.1| ribulose-phosphate 3-epimerase mature form [Expre...    59   4e-07
gb|AAC24709.1| ribulose-phosphate 3-epimerase transit form [Expr...    59   4e-07
sp|Q43157.1|RPE_SPIOL RecName: Full=Ribulose-phosphate 3-epimera...    59   4e-07
ref|XP_003524706.1| PREDICTED: ribulose-phosphate 3-epimerase, c...    58   7e-07
gb|ABK22378.1| unknown [Picea sitchensis]                              58   7e-07

>gb|AAC24710.1| ribulose-phosphate 3-epimerase mature form [Expression vector
           pFL506]
          Length = 237

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 9/54 (16%)
 Frame = -1

Query: 195 KLSDLSTNKVVCVVQGVNPWIEVDGGVDPNNAYK---------VASSAIFGAKD 61
           K+SDL   + +CV +GVNPWIEVDGGV P NAYK         VA SA+FGAKD
Sbjct: 168 KISDL---RKMCVEKGVNPWIEVDGGVTPANAYKVIEAGANALVAGSAVFGAKD 218


>gb|AAC24709.1| ribulose-phosphate 3-epimerase transit form [Expression vector
           pFL505]
          Length = 285

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 9/54 (16%)
 Frame = -1

Query: 195 KLSDLSTNKVVCVVQGVNPWIEVDGGVDPNNAYK---------VASSAIFGAKD 61
           K+SDL   + +CV +GVNPWIEVDGGV P NAYK         VA SA+FGAKD
Sbjct: 216 KISDL---RKMCVEKGVNPWIEVDGGVTPANAYKVIEAGANALVAGSAVFGAKD 266


>sp|Q43157.1|RPE_SPIOL RecName: Full=Ribulose-phosphate 3-epimerase, chloroplastic;
           AltName: Full=Pentose-5-phosphate 3-epimerase;
           Short=PPE; AltName: Full=R5P3E; Short=RPE; Flags:
           Precursor gi|1162980|gb|AAC41677.1| ribulose-5-phosphate
           3-epimerase [Spinacia oleracea]
           gi|3264788|gb|AAC24708.1| ribulose-phosphate 3-epimerase
           [Spinacia oleracea] gi|1587969|prf||2207382A
           D-ribulose-5-phosphate 3-epimerase
          Length = 285

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 9/54 (16%)
 Frame = -1

Query: 195 KLSDLSTNKVVCVVQGVNPWIEVDGGVDPNNAYK---------VASSAIFGAKD 61
           K+SDL   + +CV +GVNPWIEVDGGV P NAYK         VA SA+FGAKD
Sbjct: 216 KISDL---RKMCVEKGVNPWIEVDGGVTPANAYKVIEAGANALVAGSAVFGAKD 266


>ref|XP_003524706.1| PREDICTED: ribulose-phosphate 3-epimerase, chloroplastic-like
           [Glycine max]
          Length = 280

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/54 (59%), Positives = 36/54 (66%), Gaps = 9/54 (16%)
 Frame = -1

Query: 195 KLSDLSTNKVVCVVQGVNPWIEVDGGVDPNNAYK---------VASSAIFGAKD 61
           K+SDL   + VC  +GVNPWIEVDGGV P NAYK         VA SA+FGAKD
Sbjct: 211 KISDL---RRVCAEKGVNPWIEVDGGVGPANAYKVIEAGANALVAGSAVFGAKD 261


>gb|ABK22378.1| unknown [Picea sitchensis]
          Length = 292

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/54 (57%), Positives = 37/54 (68%), Gaps = 9/54 (16%)
 Frame = -1

Query: 195 KLSDLSTNKVVCVVQGVNPWIEVDGGVDPNNAYK---------VASSAIFGAKD 61
           K+SDL   + +C  +GVNPWIEVDGGV P+NAYK         VA SA+FGAKD
Sbjct: 223 KISDL---RRMCAERGVNPWIEVDGGVTPSNAYKVIEAGANALVAGSAVFGAKD 273


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