BLASTX nr result

ID: Atractylodes22_contig00015299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00015299
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE66401.1| S phase protein [Striga asiatica]                       79   3e-19
sp|P33444.4|RS3A_CATRO RecName: Full=40S ribosomal protein S3a; ...    79   3e-19
dbj|BAA00860.1| cyc07 [Catharanthus roseus]                            79   3e-19
dbj|BAA05057.1| cyc07 [Catharanthus roseus]                            79   3e-19
gb|ABB72801.1| 40S ribosomal protein S3a-like protein [Solanum t...    79   4e-19

>gb|ABE66401.1| S phase protein [Striga asiatica]
          Length = 190

 Score = 79.0 bits (193), Expect(2) = 3e-19
 Identities = 37/53 (69%), Positives = 43/53 (81%)
 Frame = +2

Query: 77  RDFVKKLLSLIEVHVDVTTTNNYTLKMFYIGFTKKHINHQKRTCYAQSSQIRK 235
           R  V+K  SLIE HVDV TT+NYTL++F I FTKK +N QKRTCYAQSSQIR+
Sbjct: 58  RSLVRKWQSLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQQKRTCYAQSSQIRQ 110



 Score = 41.2 bits (95), Expect(2) = 3e-19
 Identities = 21/26 (80%), Positives = 21/26 (80%)
 Frame = +1

Query: 1   IPLIAEDVQWKNVLTNF*GMDLTTDK 78
           I L AEDVQ KNVLTNF GMD TTDK
Sbjct: 31  IRLRAEDVQGKNVLTNFWGMDFTTDK 56


>sp|P33444.4|RS3A_CATRO RecName: Full=40S ribosomal protein S3a; AltName: Full=CYC07
           protein
          Length = 261

 Score = 79.0 bits (193), Expect(2) = 3e-19
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = +2

Query: 77  RDFVKKLLSLIEVHVDVTTTNNYTLKMFYIGFTKKHINHQKRTCYAQSSQIRK 235
           R  V+K  SLIE HVDV TT++YTL+MF IGFTKK  N QKRTCYAQSSQIR+
Sbjct: 111 RSLVRKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQ 163



 Score = 40.8 bits (94), Expect(2) = 3e-19
 Identities = 20/26 (76%), Positives = 21/26 (80%)
 Frame = +1

Query: 1   IPLIAEDVQWKNVLTNF*GMDLTTDK 78
           I L AED+Q KNVLTNF GMD TTDK
Sbjct: 84  IRLRAEDIQGKNVLTNFWGMDFTTDK 109


>dbj|BAA00860.1| cyc07 [Catharanthus roseus]
          Length = 245

 Score = 79.0 bits (193), Expect(2) = 3e-19
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = +2

Query: 77  RDFVKKLLSLIEVHVDVTTTNNYTLKMFYIGFTKKHINHQKRTCYAQSSQIRK 235
           R  V+K  SLIE HVDV TT++YTL+MF IGFTKK  N QKRTCYAQSSQIR+
Sbjct: 111 RSLVRKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQ 163



 Score = 40.8 bits (94), Expect(2) = 3e-19
 Identities = 20/26 (76%), Positives = 21/26 (80%)
 Frame = +1

Query: 1   IPLIAEDVQWKNVLTNF*GMDLTTDK 78
           I L AED+Q KNVLTNF GMD TTDK
Sbjct: 84  IRLRAEDIQGKNVLTNFWGMDFTTDK 109


>dbj|BAA05057.1| cyc07 [Catharanthus roseus]
          Length = 245

 Score = 79.0 bits (193), Expect(2) = 3e-19
 Identities = 38/53 (71%), Positives = 43/53 (81%)
 Frame = +2

Query: 77  RDFVKKLLSLIEVHVDVTTTNNYTLKMFYIGFTKKHINHQKRTCYAQSSQIRK 235
           R  V+K  SLIE HVDV TT++YTL+MF IGFTKK  N QKRTCYAQSSQIR+
Sbjct: 111 RSLVRKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRANQQKRTCYAQSSQIRQ 163



 Score = 40.8 bits (94), Expect(2) = 3e-19
 Identities = 20/26 (76%), Positives = 21/26 (80%)
 Frame = +1

Query: 1   IPLIAEDVQWKNVLTNF*GMDLTTDK 78
           I L AED+Q KNVLTNF GMD TTDK
Sbjct: 84  IRLRAEDIQGKNVLTNFWGMDFTTDK 109


>gb|ABB72801.1| 40S ribosomal protein S3a-like protein [Solanum tuberosum]
          Length = 260

 Score = 79.3 bits (194), Expect(2) = 4e-19
 Identities = 39/53 (73%), Positives = 43/53 (81%)
 Frame = +2

Query: 77  RDFVKKLLSLIEVHVDVTTTNNYTLKMFYIGFTKKHINHQKRTCYAQSSQIRK 235
           R  VKK  SLIE HVDV TT++YTL+MF IGFTKK  N QKRTCYAQSSQIR+
Sbjct: 111 RSLVKKWQSLIEAHVDVKTTDSYTLRMFCIGFTKKRPNQQKRTCYAQSSQIRQ 163



 Score = 40.0 bits (92), Expect(2) = 4e-19
 Identities = 20/26 (76%), Positives = 21/26 (80%)
 Frame = +1

Query: 1   IPLIAEDVQWKNVLTNF*GMDLTTDK 78
           I L AEDVQ +NVLTNF GMD TTDK
Sbjct: 84  IRLRAEDVQGRNVLTNFHGMDFTTDK 109


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