BLASTX nr result

ID: Atractylodes22_contig00015283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00015283
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g...   111   2e-26
ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g...   108   4e-26
ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g...   110   1e-25
ref|XP_002321989.1| predicted protein [Populus trichocarpa] gi|2...   108   2e-25
ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatul...   103   9e-25

>ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
           sativus] gi|449517605|ref|XP_004165836.1| PREDICTED: KH
           domain-containing protein At4g18375-like [Cucumis
           sativus]
          Length = 666

 Score =  111 bits (278), Expect(2) = 2e-26
 Identities = 58/77 (75%), Positives = 65/77 (84%)
 Frame = -3

Query: 643 DAPSSVNRVAVPLVTRSILEVVIPEYAVPKLITKSRNKLAQISELSGANVKLLDTSTEAI 464
           D PS +NR+ VPLVTRS LEVVIPE AVPKLITKS+NKLAQISELSGANV L++   +  
Sbjct: 575 DLPSGLNRIPVPLVTRSTLEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVT 634

Query: 463 EHIIQISGTPEQAERAQ 413
           + IIQISGTPEQAERAQ
Sbjct: 635 QKIIQISGTPEQAERAQ 651



 Score = 33.1 bits (74), Expect(2) = 2e-26
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = -2

Query: 353 QSLLQGFILSTQEDGP 306
           QSLLQGFILS QEDGP
Sbjct: 651 QSLLQGFILSLQEDGP 666


>ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 644

 Score =  108 bits (270), Expect(2) = 4e-26
 Identities = 55/77 (71%), Positives = 65/77 (84%)
 Frame = -3

Query: 643 DAPSSVNRVAVPLVTRSILEVVIPEYAVPKLITKSRNKLAQISELSGANVKLLDTSTEAI 464
           D  S +NR+AVPLVTRS LEVV+PEYAVPKL+ KS++KLAQISELSGANV L++   +  
Sbjct: 553 DLLSGLNRIAVPLVTRSTLEVVLPEYAVPKLVAKSKSKLAQISELSGANVTLVEDRPDVT 612

Query: 463 EHIIQISGTPEQAERAQ 413
           + IIQISGTPEQAERAQ
Sbjct: 613 QKIIQISGTPEQAERAQ 629



 Score = 35.4 bits (80), Expect(2) = 4e-26
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -2

Query: 353 QSLLQGFILSTQEDGP 306
           QSLLQGFILSTQEDGP
Sbjct: 629 QSLLQGFILSTQEDGP 644


>ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 647

 Score =  110 bits (274), Expect(2) = 1e-25
 Identities = 57/77 (74%), Positives = 65/77 (84%)
 Frame = -3

Query: 643 DAPSSVNRVAVPLVTRSILEVVIPEYAVPKLITKSRNKLAQISELSGANVKLLDTSTEAI 464
           D  S +NR+AVPLVTRS LEVVIPEYAVPKLI KS++KLAQISELSGANV L++   +  
Sbjct: 556 DVLSGLNRIAVPLVTRSTLEVVIPEYAVPKLIAKSKSKLAQISELSGANVTLVEDRPDVT 615

Query: 463 EHIIQISGTPEQAERAQ 413
           + IIQISGTPEQAERAQ
Sbjct: 616 QKIIQISGTPEQAERAQ 632



 Score = 32.0 bits (71), Expect(2) = 1e-25
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = -2

Query: 353 QSLLQGFILSTQEDGP 306
           QSLLQGFILSTQED P
Sbjct: 632 QSLLQGFILSTQEDVP 647


>ref|XP_002321989.1| predicted protein [Populus trichocarpa] gi|222868985|gb|EEF06116.1|
           predicted protein [Populus trichocarpa]
          Length = 685

 Score =  108 bits (269), Expect(2) = 2e-25
 Identities = 57/75 (76%), Positives = 64/75 (85%)
 Frame = -3

Query: 637 PSSVNRVAVPLVTRSILEVVIPEYAVPKLITKSRNKLAQISELSGANVKLLDTSTEAIEH 458
           P ++NR+ V LVTRSILEVVIPE AVPKLITKS+NKLAQISELSGANV L++   +  E 
Sbjct: 596 PPTMNRIPVTLVTRSILEVVIPEPAVPKLITKSKNKLAQISELSGANVTLVEDRPDVTEK 655

Query: 457 IIQISGTPEQAERAQ 413
           IIQISGTPEQAERAQ
Sbjct: 656 IIQISGTPEQAERAQ 670



 Score = 33.1 bits (74), Expect(2) = 2e-25
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = -2

Query: 353 QSLLQGFILSTQEDGP 306
           QSLLQGFILS QEDGP
Sbjct: 670 QSLLQGFILSIQEDGP 685


>ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatula]
           gi|355491329|gb|AES72532.1| Poly(rC)-binding protein
           [Medicago truncatula]
          Length = 646

 Score =  103 bits (258), Expect(2) = 9e-25
 Identities = 56/77 (72%), Positives = 64/77 (83%)
 Frame = -3

Query: 643 DAPSSVNRVAVPLVTRSILEVVIPEYAVPKLITKSRNKLAQISELSGANVKLLDTSTEAI 464
           D P+ +NR  V LVTRSILEVVIPEYAVPKL+ KS++KLAQISELSGANVKL++   +  
Sbjct: 556 DLPTGLNRT-VSLVTRSILEVVIPEYAVPKLLAKSKSKLAQISELSGANVKLVEDRPDEK 614

Query: 463 EHIIQISGTPEQAERAQ 413
           E IIQISGTPEQAER Q
Sbjct: 615 EKIIQISGTPEQAERGQ 631



 Score = 35.4 bits (80), Expect(2) = 9e-25
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = -2

Query: 353 QSLLQGFILSTQEDGP 306
           QSLLQGFILSTQEDGP
Sbjct: 631 QSLLQGFILSTQEDGP 646