BLASTX nr result

ID: Atractylodes22_contig00015266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00015266
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   117   1e-24
gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H...   112   3e-23
gb|ABA94261.1| retrotransposon protein, putative, unclassified [...   110   2e-22
gb|ABA99961.1| retrotransposon protein, putative, unclassified [...   104   6e-21
gb|AAS55774.2| putative polyprotein [Oryza sativa Japonica Group]     103   1e-20

>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score =  117 bits (293), Expect = 1e-24
 Identities = 53/80 (66%), Positives = 67/80 (83%)
 Frame = +3

Query: 3   FDLLKQALVTAPVLNLPDFSLPFTIECDASGRGLGAVLMQNHKPIAFFSKALGHHSLAKS 182
           FD LK+ L T+PVL LPDF+  F IECDASG G+GA+LMQ+ KP+A++SKALG  +L KS
Sbjct: 655 FDQLKRRLTTSPVLALPDFNKEFVIECDASGGGIGAILMQDRKPVAYYSKALGVRNLTKS 714

Query: 183 AYEREMMALALAVQHWRPYL 242
           AYE+E+MA+ LA+QHWRPYL
Sbjct: 715 AYEKELMAVVLAIQHWRPYL 734


>gb|ABD33394.2| FAR1; Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 657

 Score =  112 bits (280), Expect = 3e-23
 Identities = 53/80 (66%), Positives = 66/80 (82%)
 Frame = +3

Query: 3   FDLLKQALVTAPVLNLPDFSLPFTIECDASGRGLGAVLMQNHKPIAFFSKALGHHSLAKS 182
           F++LK  + TAPVL LPDFS  F IE DASG GLGA+L+QN + IA+FSKALG  +L KS
Sbjct: 140 FEVLKHRVTTAPVLALPDFSKEFYIESDASGNGLGAILLQNGRLIAYFSKALGDRNLTKS 199

Query: 183 AYEREMMALALAVQHWRPYL 242
           AYE+E+MA+AL++QHWRPYL
Sbjct: 200 AYEKELMAVALSIQHWRPYL 219


>gb|ABA94261.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1369

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/80 (63%), Positives = 62/80 (77%)
 Frame = +3

Query: 3    FDLLKQALVTAPVLNLPDFSLPFTIECDASGRGLGAVLMQNHKPIAFFSKALGHHSLAKS 182
            F  +K ALVTAPVL +PDFS+PF +E DAS +G+GAVLMQN+ PIAF SKALG   L  S
Sbjct: 813  FQAIKHALVTAPVLAMPDFSIPFVVETDASDKGMGAVLMQNNHPIAFLSKALGPRHLGLS 872

Query: 183  AYEREMMALALAVQHWRPYL 242
             YE+E +A+ +AV HWRPYL
Sbjct: 873  TYEKESLAIMMAVDHWRPYL 892


>gb|ABA99961.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1619

 Score =  104 bits (260), Expect = 6e-21
 Identities = 49/80 (61%), Positives = 60/80 (75%)
 Frame = +3

Query: 3    FDLLKQALVTAPVLNLPDFSLPFTIECDASGRGLGAVLMQNHKPIAFFSKALGHHSLAKS 182
            F  LK  LV+APVL LPDFS+PF +E DAS +G+GAVLMQ + P+AF SKALG   L  S
Sbjct: 934  FLTLKHTLVSAPVLALPDFSIPFVVETDASDKGIGAVLMQRNHPVAFLSKALGPRHLGLS 993

Query: 183  AYEREMMALALAVQHWRPYL 242
             YE+E +A+ LA+ HWRPYL
Sbjct: 994  TYEKESLAIMLAIDHWRPYL 1013


>gb|AAS55774.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 2108

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/80 (60%), Positives = 60/80 (75%)
 Frame = +3

Query: 3    FDLLKQALVTAPVLNLPDFSLPFTIECDASGRGLGAVLMQNHKPIAFFSKALGHHSLAKS 182
            FD LKQ+L++APVL +PDF   F +E DAS RG+GAVLMQ+   +AF SKALGH +   S
Sbjct: 1565 FDTLKQSLISAPVLVMPDFQKMFVVETDASDRGIGAVLMQDQHSVAFLSKALGHRTQVLS 1624

Query: 183  AYEREMMALALAVQHWRPYL 242
             YE+E +A+ LAV HWRPYL
Sbjct: 1625 TYEKESLAIILAVDHWRPYL 1644


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