BLASTX nr result

ID: Atractylodes22_contig00015226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00015226
         (932 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266038.1| PREDICTED: E3 ubiquitin-protein ligase arkad...   183   6e-44
emb|CAN73727.1| hypothetical protein VITISV_034074 [Vitis vinifera]   179   8e-43
ref|XP_002324572.1| predicted protein [Populus trichocarpa] gi|2...   177   3e-42
ref|XP_002309314.1| predicted protein [Populus trichocarpa] gi|2...   167   4e-39
ref|XP_004139268.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   157   3e-36

>ref|XP_002266038.1| PREDICTED: E3 ubiquitin-protein ligase arkadia-like isoform 1
           [Vitis vinifera]
          Length = 193

 Score =  183 bits (464), Expect = 6e-44
 Identities = 102/203 (50%), Positives = 130/203 (64%), Gaps = 8/203 (3%)
 Frame = -1

Query: 731 MAGTIPGVETARRRRFRGSSVWSDSSFIINSAFGSTRRLSY--------DTHFNSTSYLH 576
           MAG +PGVE ARRRRF  S   SDS  +  +  G TRR S+        + H  S+S + 
Sbjct: 1   MAGMLPGVECARRRRFHQSGGCSDSPTV--AVHGCTRRSSFCLYTSNHENHHATSSSSMQ 58

Query: 575 RSMASQSDEDGKLGGVARKAKERLDGRLRGHWKSETNSQERLRGANLVEEIGRKPTTSMV 396
           RS+ +Q+  D KLGGVAR+AKERLD RLR   KSE    +      +V+  GR    +MV
Sbjct: 59  RSVLNQAYSDEKLGGVAREAKERLDERLRTQRKSEPTRNKSKESLRIVD--GR----AMV 112

Query: 395 MEDLQMEVFGLKKSGSKRFNWGKMASNLKSSDQDECVVCLDKFKVGEKLARLSCTHRFHS 216
           + +LQ EVFG K+SGSKRF+WGK++   K+SDQ EC +CL+ FK GE L  L C HRFHS
Sbjct: 113 VGELQTEVFGSKRSGSKRFSWGKLS--WKASDQVECAICLEGFKAGESLVHLPCAHRFHS 170

Query: 215 VCVLPWLEDHAHCPCCRTPVLGS 147
            C++PWLE +AHCPCCR  +  S
Sbjct: 171 RCLMPWLETNAHCPCCRMGIFVS 193


>emb|CAN73727.1| hypothetical protein VITISV_034074 [Vitis vinifera]
          Length = 193

 Score =  179 bits (454), Expect = 8e-43
 Identities = 101/203 (49%), Positives = 129/203 (63%), Gaps = 8/203 (3%)
 Frame = -1

Query: 731 MAGTIPGVETARRRRFRGSSVWSDSSFIINSAFGSTRRLSY--------DTHFNSTSYLH 576
           MAG +PGVE ARRRRF  S   SDS  +  +  G TRR S+        + H  S+S + 
Sbjct: 1   MAGMLPGVECARRRRFHQSGGCSDSPTV--AVHGCTRRSSFCLYTSNHENHHATSSSSMQ 58

Query: 575 RSMASQSDEDGKLGGVARKAKERLDGRLRGHWKSETNSQERLRGANLVEEIGRKPTTSMV 396
           RS+ +Q+  D KLGGVAR+AKERLD RLR   KSE    +      +V+  GR    +MV
Sbjct: 59  RSVLNQAYSDEKLGGVAREAKERLDERLRTQRKSEPTRNKSKESLRIVD--GR----AMV 112

Query: 395 MEDLQMEVFGLKKSGSKRFNWGKMASNLKSSDQDECVVCLDKFKVGEKLARLSCTHRFHS 216
           + +LQ EVFG K+SGSKRF+WGK++   K+SDQ EC +CL+ FK GE L  L C HRFHS
Sbjct: 113 VGELQTEVFGSKRSGSKRFSWGKLS--WKASDQVECAICLEGFKAGESLVHLPCAHRFHS 170

Query: 215 VCVLPWLEDHAHCPCCRTPVLGS 147
            C++PWLE +AHCPC R  +  S
Sbjct: 171 RCLMPWLETNAHCPCXRMGIFVS 193


>ref|XP_002324572.1| predicted protein [Populus trichocarpa] gi|222866006|gb|EEF03137.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  177 bits (449), Expect = 3e-42
 Identities = 98/196 (50%), Positives = 128/196 (65%), Gaps = 4/196 (2%)
 Frame = -1

Query: 731 MAGTIPGVETARRRRFR--GSSVWSDSSFIINSAFGSTRRLSYDTHFNSTSYLHRSMASQ 558
           MAG +PGVE ARRRRF   G S+ + +              S++++  S S L RS++SQ
Sbjct: 1   MAGMLPGVECARRRRFHQSGDSLGAPAHGWSRKPSFCLYTSSHESYHGSVSSLQRSVSSQ 60

Query: 557 SDEDGKLGGVARKAKERLDGRLRGHWK--SETNSQERLRGANLVEEIGRKPTTSMVMEDL 384
           + ED KLGGVAR+AKERLD RLR   K  +ET S   LR  +     GR    SMV+ +L
Sbjct: 61  AYEDEKLGGVAREAKERLDERLRLQKKKTAETTSTGNLRDVD-----GR----SMVLGEL 111

Query: 383 QMEVFGLKKSGSKRFNWGKMASNLKSSDQDECVVCLDKFKVGEKLARLSCTHRFHSVCVL 204
           QMEV+G K+SGSKRFNW K++   K++DQDEC +CLD+FK GE L  L C HR+H  C++
Sbjct: 112 QMEVYGTKRSGSKRFNWAKLS--WKAADQDECTICLDRFKSGETLVHLPCAHRYHPRCLV 169

Query: 203 PWLEDHAHCPCCRTPV 156
           PWLE++ HCPCCR  +
Sbjct: 170 PWLENNGHCPCCRMEI 185


>ref|XP_002309314.1| predicted protein [Populus trichocarpa] gi|222855290|gb|EEE92837.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  167 bits (422), Expect = 4e-39
 Identities = 94/204 (46%), Positives = 125/204 (61%), Gaps = 12/204 (5%)
 Frame = -1

Query: 731 MAGTIPGVETARRRRFRGSSVWSDSSFIINSAFGSTRRLSY-------DTHFNSTSYLHR 573
           MAG +PGVE ARRRRF  S    DS  +   A G TRR S+       + H  S S L R
Sbjct: 1   MAGVLPGVECARRRRFHRSG---DS--LGAPAHGWTRRPSFCLYTSSHENHHGSISSLQR 55

Query: 572 SMASQSDEDGKLGGVARKAKERLDGRLRGHWKSETNSQERLRGANLV-----EEIGRKPT 408
           S+ +Q+ ED KLGGVA++AKERLD RLR   K    +++ +  A  +       +     
Sbjct: 56  SILNQAYEDEKLGGVAKEAKERLDERLRMQKKKPEITRKTMASAQFIWHKSTGNLRGVDG 115

Query: 407 TSMVMEDLQMEVFGLKKSGSKRFNWGKMASNLKSSDQDECVVCLDKFKVGEKLARLSCTH 228
            SMV  +LQMEV+G K+SGSKR+ W K++   K++DQDEC +CLD+FK GE L  L C H
Sbjct: 116 RSMVPGELQMEVYGPKRSGSKRYKWAKLS--WKAADQDECTICLDRFKSGETLVHLPCAH 173

Query: 227 RFHSVCVLPWLEDHAHCPCCRTPV 156
           R+H  C++PWLE++  CPCCR  +
Sbjct: 174 RYHPKCLVPWLENNGQCPCCRMEI 197


>ref|XP_004139268.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
           gi|449493673|ref|XP_004159405.1| PREDICTED: E3
           ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 201

 Score =  157 bits (397), Expect = 3e-36
 Identities = 88/201 (43%), Positives = 124/201 (61%), Gaps = 9/201 (4%)
 Frame = -1

Query: 731 MAGTIPGVETARRRRFRGSSVWSDSSFIINSAFGSTRRLSY-------DTHF-NSTSYLH 576
           MAG +PGVE ARRRRF  S   SDS F    + GSTRR S+       D H  +S+S   
Sbjct: 1   MAGMLPGVECARRRRFHQSINSSDSPFTAGKS-GSTRRPSFCLYTSNRDFHLISSSSSQQ 59

Query: 575 RSMASQSDEDGKLGGVARKAKERLDGRLRGHWKSETNSQERLRGANLVEEIGRKPTTSMV 396
           RS+ +Q+ ++ KLG +AR+AKERLD RLR H K E + ++     N  E  G++      
Sbjct: 60  RSLTNQAYQNDKLGEIAREAKERLDERLRTHRKPENSRKKN----NNEEVKGKESREKNN 115

Query: 395 MEDLQME-VFGLKKSGSKRFNWGKMASNLKSSDQDECVVCLDKFKVGEKLARLSCTHRFH 219
            E  +M+   G ++   KRF+WG+     K+S+Q+EC VCL++F++ E L  L C H+FH
Sbjct: 116 GEKKEMKNTKGKEEETKKRFSWGRKLMKWKASEQEECSVCLERFRLSEPLLHLPCAHKFH 175

Query: 218 SVCVLPWLEDHAHCPCCRTPV 156
           S C++PWL+ +AHCPCCR P+
Sbjct: 176 STCLVPWLQANAHCPCCRFPI 196


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