BLASTX nr result

ID: Atractylodes22_contig00015219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00015219
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316463.1| predicted protein [Populus trichocarpa] gi|2...   151   8e-43
emb|CBI18267.3| unnamed protein product [Vitis vinifera]              149   4e-42
ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica...   149   4e-42
ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinu...   147   4e-42
ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...   147   5e-42

>ref|XP_002316463.1| predicted protein [Populus trichocarpa] gi|222865503|gb|EEF02634.1|
           predicted protein [Populus trichocarpa]
          Length = 1077

 Score =  151 bits (381), Expect(2) = 8e-43
 Identities = 74/92 (80%), Positives = 82/92 (89%)
 Frame = -2

Query: 378 EKLWKTQRQLVPCKRKNQITVLVEDALSQSSFENYSSKARDSLSCWTPDSIVFNLIEAVL 199
           EK+WKTQRQLVP KRKNQIT LVEDAL++SSFENYSS+ARDSL+CW PD I FNLIEAVL
Sbjct: 390 EKMWKTQRQLVPRKRKNQITTLVEDALNKSSFENYSSRARDSLACWMPDCIGFNLIEAVL 449

Query: 198 CHIFRKERPGTILVFIMTGWDDISCLKGQLKA 103
           CHI RKERPG +LVF MTGW+DIS L+ QLKA
Sbjct: 450 CHICRKERPGAVLVF-MTGWEDISSLRDQLKA 480



 Score = 47.8 bits (112), Expect(2) = 8e-43
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = -3

Query: 110 LKPHPLLGDPNRVQQLTGHGSMATSEQR 27
           LK HPLLGDPNRV  +T HGSMATSEQ+
Sbjct: 478 LKAHPLLGDPNRVLLVTCHGSMATSEQK 505


>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score =  149 bits (377), Expect(2) = 4e-42
 Identities = 71/92 (77%), Positives = 82/92 (89%)
 Frame = -2

Query: 378 EKLWKTQRQLVPCKRKNQITVLVEDALSQSSFENYSSKARDSLSCWTPDSIVFNLIEAVL 199
           EK+WKTQ+QLVP KRKN+IT LVEDAL++SSFENYSS  RDSLSCWTPD + FNLIEAVL
Sbjct: 449 EKMWKTQKQLVPRKRKNKITALVEDALTKSSFENYSSGVRDSLSCWTPDCMGFNLIEAVL 508

Query: 198 CHIFRKERPGTILVFIMTGWDDISCLKGQLKA 103
           CHI RKERPG +LVF MTGW+DISCL+ Q++A
Sbjct: 509 CHICRKERPGAVLVF-MTGWEDISCLRDQIRA 539



 Score = 47.0 bits (110), Expect(2) = 4e-42
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -3

Query: 110 LKPHPLLGDPNRVQQLTGHGSMATSEQR 27
           ++ HPLLGDPNRV  LT HGSMATSEQ+
Sbjct: 537 IRAHPLLGDPNRVLLLTCHGSMATSEQK 564


>ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis
           vinifera]
          Length = 1136

 Score =  149 bits (377), Expect(2) = 4e-42
 Identities = 71/92 (77%), Positives = 82/92 (89%)
 Frame = -2

Query: 378 EKLWKTQRQLVPCKRKNQITVLVEDALSQSSFENYSSKARDSLSCWTPDSIVFNLIEAVL 199
           EK+WKTQ+QLVP KRKN+IT LVEDAL++SSFENYSS  RDSLSCWTPD + FNLIEAVL
Sbjct: 449 EKMWKTQKQLVPRKRKNKITALVEDALTKSSFENYSSGVRDSLSCWTPDCMGFNLIEAVL 508

Query: 198 CHIFRKERPGTILVFIMTGWDDISCLKGQLKA 103
           CHI RKERPG +LVF MTGW+DISCL+ Q++A
Sbjct: 509 CHICRKERPGAVLVF-MTGWEDISCLRDQIRA 539



 Score = 47.0 bits (110), Expect(2) = 4e-42
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -3

Query: 110 LKPHPLLGDPNRVQQLTGHGSMATSEQR 27
           ++ HPLLGDPNRV  LT HGSMATSEQ+
Sbjct: 537 IRAHPLLGDPNRVLLLTCHGSMATSEQK 564


>ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223546447|gb|EEF47947.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1129

 Score =  147 bits (372), Expect(2) = 4e-42
 Identities = 71/92 (77%), Positives = 81/92 (88%)
 Frame = -2

Query: 378 EKLWKTQRQLVPCKRKNQITVLVEDALSQSSFENYSSKARDSLSCWTPDSIVFNLIEAVL 199
           +K+WKTQRQL P KRKNQI  LVEDAL++SSFE+YSS+ARDSL+CW PD I FNLIEAVL
Sbjct: 443 DKMWKTQRQLAPRKRKNQIATLVEDALNKSSFESYSSRARDSLACWMPDCIGFNLIEAVL 502

Query: 198 CHIFRKERPGTILVFIMTGWDDISCLKGQLKA 103
           CHI RKERPG +LVF MTGW+DISCL+ QLKA
Sbjct: 503 CHICRKERPGGVLVF-MTGWEDISCLRDQLKA 533



 Score = 48.9 bits (115), Expect(2) = 4e-42
 Identities = 23/28 (82%), Positives = 24/28 (85%)
 Frame = -3

Query: 110 LKPHPLLGDPNRVQQLTGHGSMATSEQR 27
           LK HPLLGDPNRV  LT HGSMATSEQ+
Sbjct: 531 LKAHPLLGDPNRVLLLTCHGSMATSEQK 558


>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1161

 Score =  147 bits (372), Expect(2) = 5e-42
 Identities = 74/92 (80%), Positives = 79/92 (85%)
 Frame = -2

Query: 378 EKLWKTQRQLVPCKRKNQITVLVEDALSQSSFENYSSKARDSLSCWTPDSIVFNLIEAVL 199
           EKLWKTQ+QL P KRKNQIT LVEDALS SSFENYSS+ARDSL+ W PD I FNLIEAVL
Sbjct: 474 EKLWKTQKQLAPRKRKNQITALVEDALSNSSFENYSSRARDSLTSWAPDCIGFNLIEAVL 533

Query: 198 CHIFRKERPGTILVFIMTGWDDISCLKGQLKA 103
           CHI RKERPG +LVF MTGW+DIS LK QLKA
Sbjct: 534 CHICRKERPGAVLVF-MTGWEDISSLKDQLKA 564



 Score = 48.5 bits (114), Expect(2) = 5e-42
 Identities = 23/31 (74%), Positives = 25/31 (80%)
 Frame = -3

Query: 119 KVNLKPHPLLGDPNRVQQLTGHGSMATSEQR 27
           K  LK HPL+GDPNRV  LT HGSMATSEQ+
Sbjct: 559 KDQLKAHPLVGDPNRVLLLTCHGSMATSEQK 589


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