BLASTX nr result

ID: Atractylodes22_contig00015218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00015218
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABO61383.1| plastid serine hydroxymethyltransferase [Populus ...    94   9e-18
ref|XP_002309513.1| serine hydroxymethyltransferase 8 [Populus t...    93   3e-17
ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, ...    92   6e-17
ref|XP_004147741.1| PREDICTED: serine hydroxymethyltransferase, ...    90   2e-16
ref|NP_001238335.1| serine hydroxymethyltransferase 4 [Glycine m...    90   2e-16

>gb|ABO61383.1| plastid serine hydroxymethyltransferase [Populus tremuloides]
          Length = 529

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/60 (75%), Positives = 53/60 (88%)
 Frame = -3

Query: 437 ADFIHEGVQLTREVKQAVSGSKLQDFMKFVASSDFSFTDQVSELRKRVEALTTQFPIPGL 258
           AD IHEGVQ++ E K++VSGSKLQDF+KFV S DF  TD+VS+LR+RVEALTTQFPIPGL
Sbjct: 470 ADLIHEGVQISLEAKKSVSGSKLQDFLKFVKSPDFPLTDKVSDLRRRVEALTTQFPIPGL 529


>ref|XP_002309513.1| serine hydroxymethyltransferase 8 [Populus trichocarpa]
           gi|222855489|gb|EEE93036.1| serine
           hydroxymethyltransferase 8 [Populus trichocarpa]
          Length = 529

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/60 (73%), Positives = 53/60 (88%)
 Frame = -3

Query: 437 ADFIHEGVQLTREVKQAVSGSKLQDFMKFVASSDFSFTDQVSELRKRVEALTTQFPIPGL 258
           AD IHEGVQ++ E K++VSGSKLQDF+KFV S DF  TD+VS+L++RVEALTTQFPIPGL
Sbjct: 470 ADLIHEGVQISLEAKKSVSGSKLQDFLKFVKSPDFPLTDKVSDLQRRVEALTTQFPIPGL 529


>ref|XP_002277146.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial [Vitis
           vinifera] gi|296081614|emb|CBI20619.3| unnamed protein
           product [Vitis vinifera]
          Length = 528

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/60 (73%), Positives = 52/60 (86%)
 Frame = -3

Query: 437 ADFIHEGVQLTREVKQAVSGSKLQDFMKFVASSDFSFTDQVSELRKRVEALTTQFPIPGL 258
           ADFIHEGVQL+ E K++VSGSKL DFMKFV S DFS  D+VS+L++RVE LTTQFP+PGL
Sbjct: 469 ADFIHEGVQLSLEAKKSVSGSKLLDFMKFVTSPDFSLIDRVSDLQRRVETLTTQFPMPGL 528


>ref|XP_004147741.1| PREDICTED: serine hydroxymethyltransferase, mitochondrial-like
           [Cucumis sativus] gi|449519543|ref|XP_004166794.1|
           PREDICTED: serine hydroxymethyltransferase,
           mitochondrial-like [Cucumis sativus]
          Length = 528

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/61 (67%), Positives = 51/61 (83%)
 Frame = -3

Query: 440 IADFIHEGVQLTREVKQAVSGSKLQDFMKFVASSDFSFTDQVSELRKRVEALTTQFPIPG 261
           +ADFIHEGV++T + K    GSKLQ+F+KFV +SDF  TD++S+LR RVEALTTQFPIPG
Sbjct: 468 VADFIHEGVKITLDAKPLAPGSKLQEFLKFVTTSDFPLTDRISDLRSRVEALTTQFPIPG 527

Query: 260 L 258
           L
Sbjct: 528 L 528


>ref|NP_001238335.1| serine hydroxymethyltransferase 4 [Glycine max]
           gi|222142535|gb|ACM45954.1| serine
           hydroxymethyltransferase 4 [Glycine max]
          Length = 536

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 42/61 (68%), Positives = 53/61 (86%)
 Frame = -3

Query: 440 IADFIHEGVQLTREVKQAVSGSKLQDFMKFVASSDFSFTDQVSELRKRVEALTTQFPIPG 261
           IADFIHEGVQ++ E K  VSG+KLQDF+KFV SS+F   ++VSELR++VEALTTQ+PIPG
Sbjct: 476 IADFIHEGVQISLEAKSLVSGTKLQDFLKFVTSSEFPLGEKVSELRRKVEALTTQYPIPG 535

Query: 260 L 258
           +
Sbjct: 536 V 536


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