BLASTX nr result

ID: Atractylodes22_contig00015195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00015195
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283025.1| PREDICTED: 60S acidic ribosomal protein P2B ...    73   3e-11
gb|ABK93470.1| unknown [Populus trichocarpa]                           72   4e-11
ref|XP_002328062.1| predicted protein [Populus trichocarpa] gi|1...    72   4e-11
gb|AAS20966.1| 60s acidic ribosomal protein [Hyacinthus orientalis]    70   2e-10
ref|XP_002313663.1| predicted protein [Populus trichocarpa] gi|1...    68   7e-10

>ref|XP_002283025.1| PREDICTED: 60S acidic ribosomal protein P2B [Vitis vinifera]
           gi|297740089|emb|CBI30271.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 45/88 (51%), Positives = 47/88 (53%)
 Frame = -2

Query: 508 LGSVGADADEDRIELLLSEVKGKDITELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXX 329
           LGSVGA+AD+DRIELLLSEVKGKDITELIASGREKL                        
Sbjct: 27  LGSVGAEADDDRIELLLSEVKGKDITELIASGREKLASVPSGGGVAVAATAVGGASGGGA 86

Query: 328 XXXXXXXXXXXXXXXXXSDDDMGFSLFD 245
                            SDDDMGFSLFD
Sbjct: 87  PAAPEPKKEEKVEEKEESDDDMGFSLFD 114


>gb|ABK93470.1| unknown [Populus trichocarpa]
          Length = 114

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 45/88 (51%), Positives = 46/88 (52%)
 Frame = -2

Query: 508 LGSVGADADEDRIELLLSEVKGKDITELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXX 329
           LGSVGADAD+DRIELLLS VKGKDITELIASGREKL                        
Sbjct: 27  LGSVGADADDDRIELLLSSVKGKDITELIASGREKLASVPSGGGVAVASGGAPAAASGGA 86

Query: 328 XXXXXXXXXXXXXXXXXSDDDMGFSLFD 245
                            SDDDMGFSLFD
Sbjct: 87  APAAEAKKEEKVEEKEESDDDMGFSLFD 114


>ref|XP_002328062.1| predicted protein [Populus trichocarpa] gi|118481307|gb|ABK92597.1|
           unknown [Populus trichocarpa]
           gi|118485702|gb|ABK94701.1| unknown [Populus
           trichocarpa] gi|222837577|gb|EEE75942.1| predicted
           protein [Populus trichocarpa]
          Length = 114

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 45/88 (51%), Positives = 46/88 (52%)
 Frame = -2

Query: 508 LGSVGADADEDRIELLLSEVKGKDITELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXX 329
           LGSVGADAD+DRIELLLS VKGKDITELIASGREKL                        
Sbjct: 27  LGSVGADADDDRIELLLSSVKGKDITELIASGREKLASVPSGGGVAVAAGGAPAAASGGA 86

Query: 328 XXXXXXXXXXXXXXXXXSDDDMGFSLFD 245
                            SDDDMGFSLFD
Sbjct: 87  APAAEAKKEEKVEEKEESDDDMGFSLFD 114


>gb|AAS20966.1| 60s acidic ribosomal protein [Hyacinthus orientalis]
          Length = 114

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 43/88 (48%), Positives = 46/88 (52%)
 Frame = -2

Query: 508 LGSVGADADEDRIELLLSEVKGKDITELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXX 329
           LGSVGADA++DRIELLLSEVKGKDITELIASGREK                         
Sbjct: 27  LGSVGADAEDDRIELLLSEVKGKDITELIASGREKFASVPSGGAAIAVSAPAAGGGAAPA 86

Query: 328 XXXXXXXXXXXXXXXXXSDDDMGFSLFD 245
                            SD+DMGFSLFD
Sbjct: 87  AAAAETKKEEKVEEKEESDEDMGFSLFD 114


>ref|XP_002313663.1| predicted protein [Populus trichocarpa] gi|118484510|gb|ABK94130.1|
           unknown [Populus trichocarpa]
           gi|118485202|gb|ABK94462.1| unknown [Populus
           trichocarpa] gi|118487376|gb|ABK95516.1| unknown
           [Populus trichocarpa] gi|118488119|gb|ABK95879.1|
           unknown [Populus trichocarpa]
           gi|222850071|gb|EEE87618.1| predicted protein [Populus
           trichocarpa]
          Length = 113

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 45/88 (51%), Positives = 46/88 (52%)
 Frame = -2

Query: 508 LGSVGADADEDRIELLLSEVKGKDITELIASGREKLXXXXXXXXXXXXXXXXXXXXXXXX 329
           LGSVGADAD+DRIELLLS VKGKDITELIASGREKL                        
Sbjct: 27  LGSVGADADDDRIELLLSSVKGKDITELIASGREKL-ASVPSGGGVAVSAGAAPAAAGGA 85

Query: 328 XXXXXXXXXXXXXXXXXSDDDMGFSLFD 245
                            SDDDMGFSLFD
Sbjct: 86  APAAEAKKEEKVEEKEESDDDMGFSLFD 113


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