BLASTX nr result

ID: Atractylodes22_contig00015134 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00015134
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19930.3| unnamed protein product [Vitis vinifera]              234   2e-73
ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis v...   234   2e-73
ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus ...   218   2e-70
ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|2...   219   2e-69
ref|XP_004144256.1| PREDICTED: F-box protein SKP2A-like [Cucumis...   219   4e-68

>emb|CBI19930.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  234 bits (598), Expect(2) = 2e-73
 Identities = 119/149 (79%), Positives = 128/149 (85%), Gaps = 10/149 (6%)
 Frame = -1

Query: 563 AGVMSLAYGCPDLRALDLCGCVLITDESVIALANNCLHLRSLGLYYCQNITDSAMYALAH 384
           AGVMSLAYGCPDLRALDLCGCV ITDESVIALAN CLHLRSLGLY+CQNITD AMY+LA 
Sbjct: 281 AGVMSLAYGCPDLRALDLCGCVHITDESVIALANRCLHLRSLGLYFCQNITDKAMYSLAQ 340

Query: 383 SR-----DVWSS--SRYEEDDGLRSLNISQCTALTPPAVQALCDSCPALHTCPGRHSLII 225
           SR     ++W S  SRY E +GL +LNISQCTALTPPAVQA+CDS PALHTCPGRHSLII
Sbjct: 341 SRVKNKHEMWESMKSRYSE-EGLMNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLII 399

Query: 224 SGCLNLTSVHCACAFQSHR---QLSHPAH 147
           SGCL+LTSVHCAC  Q+HR   QLSHPAH
Sbjct: 400 SGCLSLTSVHCACGVQAHRTASQLSHPAH 428



 Score = 68.2 bits (165), Expect(2) = 2e-73
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = -3

Query: 753 GCVKAASDKALKAIGCNCSELQSLNLGWCENVGDAGVMS 637
           GC KAAS++AL+AIG NCS+LQSLNLGWCE+V DAGVMS
Sbjct: 247 GCGKAASNRALQAIGRNCSQLQSLNLGWCEDVSDAGVMS 285


>ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis vinifera]
          Length = 370

 Score =  234 bits (598), Expect(2) = 2e-73
 Identities = 119/149 (79%), Positives = 128/149 (85%), Gaps = 10/149 (6%)
 Frame = -1

Query: 563 AGVMSLAYGCPDLRALDLCGCVLITDESVIALANNCLHLRSLGLYYCQNITDSAMYALAH 384
           AGVMSLAYGCPDLRALDLCGCV ITDESVIALAN CLHLRSLGLY+CQNITD AMY+LA 
Sbjct: 223 AGVMSLAYGCPDLRALDLCGCVHITDESVIALANRCLHLRSLGLYFCQNITDKAMYSLAQ 282

Query: 383 SR-----DVWSS--SRYEEDDGLRSLNISQCTALTPPAVQALCDSCPALHTCPGRHSLII 225
           SR     ++W S  SRY E +GL +LNISQCTALTPPAVQA+CDS PALHTCPGRHSLII
Sbjct: 283 SRVKNKHEMWESMKSRYSE-EGLMNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLII 341

Query: 224 SGCLNLTSVHCACAFQSHR---QLSHPAH 147
           SGCL+LTSVHCAC  Q+HR   QLSHPAH
Sbjct: 342 SGCLSLTSVHCACGVQAHRTASQLSHPAH 370



 Score = 68.2 bits (165), Expect(2) = 2e-73
 Identities = 31/39 (79%), Positives = 36/39 (92%)
 Frame = -3

Query: 753 GCVKAASDKALKAIGCNCSELQSLNLGWCENVGDAGVMS 637
           GC KAAS++AL+AIG NCS+LQSLNLGWCE+V DAGVMS
Sbjct: 189 GCGKAASNRALQAIGRNCSQLQSLNLGWCEDVSDAGVMS 227


>ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus communis]
           gi|223540477|gb|EEF42044.1| F-box/LRR-repeat protein,
           putative [Ricinus communis]
          Length = 373

 Score =  218 bits (555), Expect(2) = 2e-70
 Identities = 108/147 (73%), Positives = 121/147 (82%), Gaps = 9/147 (6%)
 Frame = -1

Query: 560 GVMSLAYGCPDLRALDLCGCVLITDESVIALANNCLHLRSLGLYYCQNITDSAMYALAHS 381
           GVMSLAYGCPDLR LDLCGCV ITD+SVIALA  CLHLRSLGLYYC+NITD AMY+L HS
Sbjct: 227 GVMSLAYGCPDLRTLDLCGCVNITDDSVIALAYRCLHLRSLGLYYCRNITDRAMYSLVHS 286

Query: 380 R-----DVWSSSRYE-EDDGLRSLNISQCTALTPPAVQALCDSCPALHTCPGRHSLIISG 219
           R      +W S +   +++GLRSLNISQCTALTPPAVQALCD  PALHTC GRHSL++SG
Sbjct: 287 RVKNKPAMWESVKGRCDEEGLRSLNISQCTALTPPAVQALCDCFPALHTCSGRHSLVMSG 346

Query: 218 CLNLTSVHCACAFQSHRQ---LSHPAH 147
           CLNLTSVHCACA Q+HR    + +PAH
Sbjct: 347 CLNLTSVHCACAVQAHRTFRFIPNPAH 373



 Score = 74.3 bits (181), Expect(2) = 2e-70
 Identities = 33/39 (84%), Positives = 37/39 (94%)
 Frame = -3

Query: 753 GCVKAASDKALKAIGCNCSELQSLNLGWCENVGDAGVMS 637
           GCVKAA+D+AL+AIG NCS+LQSLNLGWCENVGD GVMS
Sbjct: 192 GCVKAATDRALQAIGRNCSQLQSLNLGWCENVGDVGVMS 230


>ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|222856121|gb|EEE93668.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score =  219 bits (558), Expect(2) = 2e-69
 Identities = 107/147 (72%), Positives = 119/147 (80%), Gaps = 9/147 (6%)
 Frame = -1

Query: 560 GVMSLAYGCPDLRALDLCGCVLITDESVIALANNCLHLRSLGLYYCQNITDSAMYALAHS 381
           GVMSLAYGCPDLR LDLCGCV ITD+SVIALAN C HLRSLGLYYC+NITD AMY+L H+
Sbjct: 217 GVMSLAYGCPDLRTLDLCGCVCITDDSVIALANRCPHLRSLGLYYCRNITDRAMYSLVHN 276

Query: 380 R-----DVWSSSRYE-EDDGLRSLNISQCTALTPPAVQALCDSCPALHTCPGRHSLIISG 219
           R      +W S +   +++GL  LNISQCTALTPPAVQALCDS PALHTC GRHSL++SG
Sbjct: 277 RVKNKLSMWESMKGRCDEEGLSRLNISQCTALTPPAVQALCDSFPALHTCSGRHSLVMSG 336

Query: 218 CLNLTSVHCACAFQSHRQLS---HPAH 147
           CLNLTSVHC CA Q+HR  S   HPAH
Sbjct: 337 CLNLTSVHCVCAVQAHRSASSFPHPAH 363



 Score = 70.1 bits (170), Expect(2) = 2e-69
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = -3

Query: 753 GCVKAASDKALKAIGCNCSELQSLNLGWCENVGDAGVMS 637
           GCVK A+D+AL+ IG NCS+LQ+LNLGWCENVGD GVMS
Sbjct: 182 GCVKGATDRALQGIGRNCSQLQTLNLGWCENVGDVGVMS 220


>ref|XP_004144256.1| PREDICTED: F-box protein SKP2A-like [Cucumis sativus]
           gi|449517068|ref|XP_004165568.1| PREDICTED: F-box
           protein SKP2A-like [Cucumis sativus]
          Length = 376

 Score =  219 bits (559), Expect(2) = 4e-68
 Identities = 110/147 (74%), Positives = 121/147 (82%), Gaps = 9/147 (6%)
 Frame = -1

Query: 560 GVMSLAYGCPDLRALDLCGCVLITDESVIALANNCLHLRSLGLYYCQNITDSAMYALAHS 381
           GVMSLAYGCPDLR LDLCGCVLITD+SVIALAN C HLRSLGLYYCQNITD AMY+LAHS
Sbjct: 230 GVMSLAYGCPDLRILDLCGCVLITDDSVIALANMCPHLRSLGLYYCQNITDRAMYSLAHS 289

Query: 380 -----RDVWSSSRYE-EDDGLRSLNISQCTALTPPAVQALCDSCPALHTCPGRHSLIISG 219
                   W + + + +DDGLR+LNISQCTALTPPAVQA+CDS PALHTC GRHSLI+SG
Sbjct: 290 CIKNKPTKWGTGKGKNDDDGLRTLNISQCTALTPPAVQAVCDSFPALHTCSGRHSLIMSG 349

Query: 218 CLNLTSVHCACAFQSHRQLS---HPAH 147
           CLNL SVHCACA Q+HR  +   H AH
Sbjct: 350 CLNLISVHCACAVQAHRAATAFLHSAH 376



 Score = 65.1 bits (157), Expect(2) = 4e-68
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = -3

Query: 753 GCVKAASDKALKAIGCNCSELQSLNLGWCENVGDAGVMS 637
           GCVKAASD AL+AIG  C+ LQS+NLGWCENV D GVMS
Sbjct: 195 GCVKAASDTALQAIGQYCNHLQSVNLGWCENVTDVGVMS 233


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