BLASTX nr result

ID: Atractylodes22_contig00015107 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00015107
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprot...   300   6e-80
ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein...   287   7e-76
ref|XP_002330956.1| predicted protein [Populus trichocarpa] gi|1...   286   9e-76
gb|ABK93026.1| unknown [Populus trichocarpa]                          286   2e-75
ref|XP_002331278.1| predicted protein [Populus trichocarpa] gi|2...   285   4e-75

>ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3 [Vitis
           vinifera] gi|298204446|emb|CBI16926.3| unnamed protein
           product [Vitis vinifera]
          Length = 182

 Score =  300 bits (769), Expect = 6e-80
 Identities = 143/155 (92%), Positives = 152/155 (98%)
 Frame = +1

Query: 1   KKVNFLEWKREGGHREAHVMHRYHVTGRDDYKKYSSLCRMTQKLVNILKQMDPRDPYRIE 180
           KKVNFLEWKREGGHREAHVMHRYHVTGRDDYKKYS LCRM QKLVNILKQMDPRDP+RIE
Sbjct: 13  KKVNFLEWKREGGHREAHVMHRYHVTGRDDYKKYSGLCRMVQKLVNILKQMDPRDPFRIE 72

Query: 181 MTDALLEKLYNMGVIPSQKSLALCDRLSVSSFCRRRLATLLVRLKFAEHLKEAVTYIEQG 360
           MTD LLEKLYN+GVIP++KSLALCDRL+VSSFCRRRL+T+LVRLKFAEHLKEAVTYIEQG
Sbjct: 73  MTDMLLEKLYNIGVIPTRKSLALCDRLAVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQG 132

Query: 361 HIRVGPDTVTDPAFLVTRNMEDFVTWVDTSKIKRK 465
           HIRVGPDTVTDPAFLVTRN+EDFVTWVD+SKIKRK
Sbjct: 133 HIRVGPDTVTDPAFLVTRNLEDFVTWVDSSKIKRK 167


>ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis] gi|223534772|gb|EEF36463.1| U3 small
           nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis]
          Length = 182

 Score =  287 bits (734), Expect = 7e-76
 Identities = 137/155 (88%), Positives = 146/155 (94%)
 Frame = +1

Query: 1   KKVNFLEWKREGGHREAHVMHRYHVTGRDDYKKYSSLCRMTQKLVNILKQMDPRDPYRIE 180
           KKVNFL WKREG HREA VM RYH+  RDDYKKYS +CRM QKLVNILKQMDPRDPYR+E
Sbjct: 13  KKVNFLLWKREGDHREAKVMQRYHIVDRDDYKKYSGICRMVQKLVNILKQMDPRDPYRVE 72

Query: 181 MTDALLEKLYNMGVIPSQKSLALCDRLSVSSFCRRRLATLLVRLKFAEHLKEAVTYIEQG 360
           MTD LLEKLYNMGVIPS+KSLALCDRLSVSSFCRRRL+T+L+RLKFAEHLKEA+TYIEQG
Sbjct: 73  MTDILLEKLYNMGVIPSRKSLALCDRLSVSSFCRRRLSTVLMRLKFAEHLKEAITYIEQG 132

Query: 361 HIRVGPDTVTDPAFLVTRNMEDFVTWVDTSKIKRK 465
           HIRVGP+TVTDPAFLVTRNMEDFVTWVDTSKIKRK
Sbjct: 133 HIRVGPETVTDPAFLVTRNMEDFVTWVDTSKIKRK 167


>ref|XP_002330956.1| predicted protein [Populus trichocarpa] gi|118485533|gb|ABK94619.1|
           unknown [Populus trichocarpa]
           gi|222873150|gb|EEF10281.1| predicted protein [Populus
           trichocarpa]
          Length = 182

 Score =  286 bits (733), Expect = 9e-76
 Identities = 136/155 (87%), Positives = 146/155 (94%)
 Frame = +1

Query: 1   KKVNFLEWKREGGHREAHVMHRYHVTGRDDYKKYSSLCRMTQKLVNILKQMDPRDPYRIE 180
           KKVNFL+WKRE  HREAHVM RYH+  RDDYKKYSS+CRM QKL NILKQMDPRDP+R+E
Sbjct: 13  KKVNFLDWKRENNHREAHVMQRYHIVERDDYKKYSSVCRMVQKLTNILKQMDPRDPFRVE 72

Query: 181 MTDALLEKLYNMGVIPSQKSLALCDRLSVSSFCRRRLATLLVRLKFAEHLKEAVTYIEQG 360
           MTD LLEKLYNMGVIPS+KSLALCDRLSVSSFCRRRL+T+L+RLKFAEHLKEAVTYIEQG
Sbjct: 73  MTDVLLEKLYNMGVIPSRKSLALCDRLSVSSFCRRRLSTVLMRLKFAEHLKEAVTYIEQG 132

Query: 361 HIRVGPDTVTDPAFLVTRNMEDFVTWVDTSKIKRK 465
           HIRVGP+TVTDPAFLVTRN EDFVTWVDTSKIKRK
Sbjct: 133 HIRVGPETVTDPAFLVTRNTEDFVTWVDTSKIKRK 167


>gb|ABK93026.1| unknown [Populus trichocarpa]
          Length = 182

 Score =  286 bits (731), Expect = 2e-75
 Identities = 135/155 (87%), Positives = 146/155 (94%)
 Frame = +1

Query: 1   KKVNFLEWKREGGHREAHVMHRYHVTGRDDYKKYSSLCRMTQKLVNILKQMDPRDPYRIE 180
           KKVNFL+WKRE  HREAHVM RYH+  RDDYKKYSS+CRM QKL NILKQMDPRDPYR+E
Sbjct: 13  KKVNFLDWKREQNHREAHVMQRYHIVERDDYKKYSSVCRMVQKLTNILKQMDPRDPYRVE 72

Query: 181 MTDALLEKLYNMGVIPSQKSLALCDRLSVSSFCRRRLATLLVRLKFAEHLKEAVTYIEQG 360
           MTD LLEKLYNMGVIPS+KSLALCDRLSVSSFCRRRL+T+L+RLKFAEHLKEA+TYIEQG
Sbjct: 73  MTDVLLEKLYNMGVIPSRKSLALCDRLSVSSFCRRRLSTVLMRLKFAEHLKEAITYIEQG 132

Query: 361 HIRVGPDTVTDPAFLVTRNMEDFVTWVDTSKIKRK 465
           HIR GP+TVTDPAFLVTR+MEDFVTWVDTSKIKRK
Sbjct: 133 HIRAGPETVTDPAFLVTRSMEDFVTWVDTSKIKRK 167


>ref|XP_002331278.1| predicted protein [Populus trichocarpa] gi|222873703|gb|EEF10834.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  285 bits (728), Expect = 4e-75
 Identities = 134/155 (86%), Positives = 146/155 (94%)
 Frame = +1

Query: 1   KKVNFLEWKREGGHREAHVMHRYHVTGRDDYKKYSSLCRMTQKLVNILKQMDPRDPYRIE 180
           KKVNFL+WKRE  HREAHVM RYH+  RDDYKKYSS+CRM QKL NILKQMDPRDPYR+E
Sbjct: 13  KKVNFLDWKREQNHREAHVMQRYHIVERDDYKKYSSVCRMVQKLTNILKQMDPRDPYRVE 72

Query: 181 MTDALLEKLYNMGVIPSQKSLALCDRLSVSSFCRRRLATLLVRLKFAEHLKEAVTYIEQG 360
           MTD LLEKLYNMGVIPS+KSLALCDRLSVSSFCRRRL+T+L+RLKF+EHLKEA+TYIEQG
Sbjct: 73  MTDVLLEKLYNMGVIPSRKSLALCDRLSVSSFCRRRLSTVLMRLKFSEHLKEAITYIEQG 132

Query: 361 HIRVGPDTVTDPAFLVTRNMEDFVTWVDTSKIKRK 465
           HIR GP+TVTDPAFLVTR+MEDFVTWVDTSKIKRK
Sbjct: 133 HIRAGPETVTDPAFLVTRSMEDFVTWVDTSKIKRK 167


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