BLASTX nr result

ID: Atractylodes22_contig00015056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00015056
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...    97   1e-18
ref|XP_003609690.1| Pre-mRNA-splicing factor ATP-dependent RNA h...    91   1e-16
ref|XP_002523130.1| ATP-dependent RNA helicase, putative [Ricinu...    91   1e-16
ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA h...    91   1e-16
ref|XP_002302733.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16

>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
           vinifera]
          Length = 1414

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/67 (71%), Positives = 57/67 (85%), Gaps = 2/67 (2%)
 Frame = +3

Query: 3   DIVDYIGQAYKKILSIHKRLPSGGILVFVTGQREVEYLCRKLRKASLE--MTKMKSNVNS 176
           +IVDYIGQAYKKILSIHK+LP GGILVFVTGQREVEYLC+KLRKAS E  +   K N+ +
Sbjct: 579 EIVDYIGQAYKKILSIHKKLPQGGILVFVTGQREVEYLCQKLRKASRELMLNSSKQNIGN 638

Query: 177 EVSVVTD 197
           EV+ V++
Sbjct: 639 EVTAVSE 645


>ref|XP_003609690.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 [Medicago
           truncatula] gi|355510745|gb|AES91887.1|
           Pre-mRNA-splicing factor ATP-dependent RNA helicase
           prp16 [Medicago truncatula]
          Length = 1256

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 2/67 (2%)
 Frame = +3

Query: 3   DIVDYIGQAYKKILSIHKRLPSGGILVFVTGQREVEYLCRKLRKASLE--MTKMKSNVNS 176
           +I DY+G AYKKIL+IHK+LPSGGILVFVTGQREVE LCRKLRKAS E  M K+K +V +
Sbjct: 418 EITDYVGAAYKKILAIHKKLPSGGILVFVTGQREVEDLCRKLRKASKEFIMKKVKGSVEN 477

Query: 177 EVSVVTD 197
           + +VV +
Sbjct: 478 DSNVVNE 484


>ref|XP_002523130.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223537692|gb|EEF39315.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 868

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/50 (84%), Positives = 47/50 (94%)
 Frame = +3

Query: 3   DIVDYIGQAYKKILSIHKRLPSGGILVFVTGQREVEYLCRKLRKASLEMT 152
           DIVDYIGQAYKK++SIHKRLP GGILVFVTGQREVEYLC+KL KAS ++T
Sbjct: 51  DIVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCQKLHKASKQLT 100


>ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
           truncatula] gi|355506130|gb|AES87272.1|
           Pre-mRNA-splicing factor ATP-dependent RNA helicase
           PRP16 [Medicago truncatula]
          Length = 1331

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 46/67 (68%), Positives = 56/67 (83%), Gaps = 2/67 (2%)
 Frame = +3

Query: 3   DIVDYIGQAYKKILSIHKRLPSGGILVFVTGQREVEYLCRKLRKASLE--MTKMKSNVNS 176
           +I DY+G AYKKIL+IHK+LPSGGILVFVTGQREVE LCRKLRKAS E  M K+K +V +
Sbjct: 492 EITDYVGAAYKKILAIHKKLPSGGILVFVTGQREVEDLCRKLRKASKEFIMKKVKGSVEN 551

Query: 177 EVSVVTD 197
           + +VV +
Sbjct: 552 DSNVVNE 558


>ref|XP_002302733.1| predicted protein [Populus trichocarpa] gi|222844459|gb|EEE82006.1|
           predicted protein [Populus trichocarpa]
          Length = 1130

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/67 (65%), Positives = 52/67 (77%), Gaps = 2/67 (2%)
 Frame = +3

Query: 3   DIVDYIGQAYKKILSIHKRLPSGGILVFVTGQREVEYLCRKLRKASLEM--TKMKSNVNS 176
           + VDYIGQAYKK++SIHKRLP GGILVFVTGQREVEYLC+KLRKAS E+     K     
Sbjct: 391 ETVDYIGQAYKKVMSIHKRLPQGGILVFVTGQREVEYLCQKLRKASTELIANTAKGRAGD 450

Query: 177 EVSVVTD 197
           EV  +++
Sbjct: 451 EVPAMSE 457


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