BLASTX nr result

ID: Atractylodes22_contig00014961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014961
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL47480.1| cyclin D3 [Helianthus tuberosus]                       118   4e-25
dbj|BAA76478.1| NtcycD3-1 [Nicotiana tabacum]                          99   3e-19
emb|CAQ03484.1| cyclin D3 [Actinidia deliciosa var. deliciosa]         91   1e-16
dbj|BAE80324.1| cyclin D3-1 [Camellia sinensis]                        89   5e-16
ref|XP_002298743.1| predicted protein [Populus trichocarpa] gi|2...    89   5e-16

>gb|AAL47480.1| cyclin D3 [Helianthus tuberosus]
          Length = 357

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/87 (66%), Positives = 69/87 (79%)
 Frame = +2

Query: 227 ITETTHLHLPPLNHQDFFWEDEELVSLFTKEQQQLQTPPSTFSSDQTDPSLLLARKEAVD 406
           +T+++ LHLPPL+  D  WE EELVSLFTKEQ+Q +  P T S  +T PS+  ARKEAVD
Sbjct: 39  LTDSSDLHLPPLDQLDLSWEHEELVSLFTKEQEQQKQTPCTLSFGKTSPSVFAARKEAVD 98

Query: 407 WILKVKSHFGFTHLTAILSINYLDRFL 487
           WILKVKS +GFT LTAIL+INYLDRFL
Sbjct: 99  WILKVKSCYGFTPLTAILAINYLDRFL 125


>dbj|BAA76478.1| NtcycD3-1 [Nicotiana tabacum]
          Length = 368

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 55/106 (51%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
 Frame = +2

Query: 173 YCEEQXXXXXXXXXXXXXITETTHLHLP-PLNHQDFFWEDEELVSLFTKEQQQLQTPPST 349
           YCEE+             + +   L LP PL  QD FWEDEEL+SLFTKE++ +    S 
Sbjct: 22  YCEEERWEETIEDEI---LEKEATLPLPLPLLEQDLFWEDEELLSLFTKEKETI----SN 74

Query: 350 FSSDQTDPSLLLARKEAVDWILKVKSHFGFTHLTAILSINYLDRFL 487
           F + +TDP L L+RKEAV WILKV +H+GF+  TAIL+INY DRFL
Sbjct: 75  FETIKTDPLLCLSRKEAVKWILKVNAHYGFSTFTAILAINYFDRFL 120


>emb|CAQ03484.1| cyclin D3 [Actinidia deliciosa var. deliciosa]
          Length = 139

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/75 (60%), Positives = 57/75 (76%)
 Frame = +2

Query: 260 LNHQDFFWEDEELVSLFTKEQQQLQTPPSTFSSDQTDPSLLLARKEAVDWILKVKSHFGF 439
           L H D FWEDEEL+SLF+KEQ+      +  + D TD +L +ARKEAV+WIL+V + +GF
Sbjct: 38  LEHHDLFWEDEELLSLFSKEQET----HTHLNLDNTDSALSVARKEAVEWILRVNACYGF 93

Query: 440 THLTAILSINYLDRF 484
           T LTAIL+INYLDRF
Sbjct: 94  TPLTAILAINYLDRF 108


>dbj|BAE80324.1| cyclin D3-1 [Camellia sinensis]
          Length = 371

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/78 (56%), Positives = 56/78 (71%)
 Frame = +2

Query: 254 PPLNHQDFFWEDEELVSLFTKEQQQLQTPPSTFSSDQTDPSLLLARKEAVDWILKVKSHF 433
           P L  QD FWEDEEL SL +KEQ+        F S +TDPSL  AR+ AV+W+LKV +H+
Sbjct: 61  PQLLEQDLFWEDEELTSLLSKEQEN-----PLFHSLETDPSLGGARRAAVEWLLKVNAHY 115

Query: 434 GFTHLTAILSINYLDRFL 487
            F+ LTA+L++NYLDRFL
Sbjct: 116 SFSALTAVLAVNYLDRFL 133


>ref|XP_002298743.1| predicted protein [Populus trichocarpa] gi|222846001|gb|EEE83548.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 50/105 (47%), Positives = 63/105 (60%)
 Frame = +2

Query: 173 YCEEQXXXXXXXXXXXXXITETTHLHLPPLNHQDFFWEDEELVSLFTKEQQQLQTPPSTF 352
           YCEE               T    L    L  QD FWEDEEL+SLF+KEQ+Q  +     
Sbjct: 30  YCEEGRWEDESEEEVLQESTFVNDLFPLSLLEQDLFWEDEELLSLFSKEQEQQASVSVNN 89

Query: 353 SSDQTDPSLLLARKEAVDWILKVKSHFGFTHLTAILSINYLDRFL 487
            +D  DP L  AR+EAV+W+LKV +H+GF+ LT+IL+ NYLDRFL
Sbjct: 90  VAD--DPFLSRARQEAVEWMLKVIAHYGFSALTSILAFNYLDRFL 132


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