BLASTX nr result

ID: Atractylodes22_contig00014902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014902
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524303.1| polypyrimidine tract binding protein, putati...   287   1e-75
ref|XP_003548101.1| PREDICTED: polypyrimidine tract-binding prot...   278   6e-73
ref|XP_003518587.1| PREDICTED: polypyrimidine tract-binding prot...   278   6e-73
ref|XP_002893943.1| predicted protein [Arabidopsis lyrata subsp....   275   5e-72
ref|XP_002306709.1| predicted protein [Populus trichocarpa] gi|2...   275   5e-72

>ref|XP_002524303.1| polypyrimidine tract binding protein, putative [Ricinus communis]
           gi|223536394|gb|EEF38043.1| polypyrimidine tract binding
           protein, putative [Ricinus communis]
          Length = 437

 Score =  287 bits (735), Expect = 1e-75
 Identities = 140/154 (90%), Positives = 148/154 (96%)
 Frame = +3

Query: 3   RNKPDHALVQMGDGFQAELAVHFLKGAEVFGKRLEVNFSKHANITMGAETHEYLNSNLNR 182
           RNKPDHALVQMGDGFQAELAVHFLKGA +FGKRLEVNFSKH NIT GA+THEY+NSNLNR
Sbjct: 280 RNKPDHALVQMGDGFQAELAVHFLKGAVLFGKRLEVNFSKHPNITQGADTHEYVNSNLNR 339

Query: 183 FNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEIVSHLEEHGSIVNTKLFEMNGKKQALVL 362
           FNRNAAKNYRYCCSPTKMIHLSTLPQD+TEEEIVSHLEEHG+IVNTKLFEMNGKKQALVL
Sbjct: 340 FNRNAAKNYRYCCSPTKMIHLSTLPQDITEEEIVSHLEEHGTIVNTKLFEMNGKKQALVL 399

Query: 363 FETEEQATEALVCKHASSLGDSMIRISFSQLQTI 464
           FETEEQATEALVCKHA S+  S+IRISFSQLQ+I
Sbjct: 400 FETEEQATEALVCKHAISVAGSIIRISFSQLQSI 433


>ref|XP_003548101.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
           [Glycine max]
          Length = 439

 Score =  278 bits (712), Expect = 6e-73
 Identities = 133/154 (86%), Positives = 146/154 (94%)
 Frame = +3

Query: 3   RNKPDHALVQMGDGFQAELAVHFLKGAEVFGKRLEVNFSKHANITMGAETHEYLNSNLNR 182
           RNKPDHAL+QMGDGFQAELAVHFLKGA +FGKRLEVN+SKHANIT GA+THEY+NSNLNR
Sbjct: 286 RNKPDHALIQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHANITQGADTHEYVNSNLNR 345

Query: 183 FNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEIVSHLEEHGSIVNTKLFEMNGKKQALVL 362
           FNRNAAKNYRYCCSPTKM+HLSTLPQD+TEEE+VS LEEHG+IVN+K+FEMNGKKQALV 
Sbjct: 346 FNRNAAKNYRYCCSPTKMVHLSTLPQDITEEEVVSLLEEHGTIVNSKVFEMNGKKQALVQ 405

Query: 363 FETEEQATEALVCKHASSLGDSMIRISFSQLQTI 464
           FETEEQATEALVCKHAS L  S++RISFSQLQ I
Sbjct: 406 FETEEQATEALVCKHASPLSGSVVRISFSQLQNI 439


>ref|XP_003518587.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
           [Glycine max]
          Length = 439

 Score =  278 bits (712), Expect = 6e-73
 Identities = 135/154 (87%), Positives = 145/154 (94%)
 Frame = +3

Query: 3   RNKPDHALVQMGDGFQAELAVHFLKGAEVFGKRLEVNFSKHANITMGAETHEYLNSNLNR 182
           RNKPDHAL+QMGDGFQAELAVHFLKGA +FGKRLEVN+SKHANIT GA+THEY NSNLNR
Sbjct: 286 RNKPDHALIQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHANITQGADTHEYANSNLNR 345

Query: 183 FNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEIVSHLEEHGSIVNTKLFEMNGKKQALVL 362
           FNRNAAKNYRYCCSPTKMIHLSTLPQD+TEEEIVS LEEHG+IVN+K+FEMNGKKQALV 
Sbjct: 346 FNRNAAKNYRYCCSPTKMIHLSTLPQDITEEEIVSLLEEHGTIVNSKVFEMNGKKQALVQ 405

Query: 363 FETEEQATEALVCKHASSLGDSMIRISFSQLQTI 464
           FETEEQATEALVCKHAS L  S++RISFSQLQ I
Sbjct: 406 FETEEQATEALVCKHASPLSGSVVRISFSQLQNI 439


>ref|XP_002893943.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339785|gb|EFH70202.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 432

 Score =  275 bits (704), Expect = 5e-72
 Identities = 131/154 (85%), Positives = 146/154 (94%)
 Frame = +3

Query: 3   RNKPDHALVQMGDGFQAELAVHFLKGAEVFGKRLEVNFSKHANITMGAETHEYLNSNLNR 182
           RNKPDHALVQMGDGFQAELAVHFLKGA +FGKRLEVNFSKH NIT G ++H+Y+NSNLNR
Sbjct: 279 RNKPDHALVQMGDGFQAELAVHFLKGAVLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNR 338

Query: 183 FNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEIVSHLEEHGSIVNTKLFEMNGKKQALVL 362
           FNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEE+++H++EHG+IVNTK+FEMNGKKQALV 
Sbjct: 339 FNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAIVNTKVFEMNGKKQALVQ 398

Query: 363 FETEEQATEALVCKHASSLGDSMIRISFSQLQTI 464
           FE EE+A EALVCKHA+SLG S+IRISFSQLQTI
Sbjct: 399 FENEEEAAEALVCKHATSLGGSIIRISFSQLQTI 432


>ref|XP_002306709.1| predicted protein [Populus trichocarpa] gi|222856158|gb|EEE93705.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  275 bits (704), Expect = 5e-72
 Identities = 132/154 (85%), Positives = 147/154 (95%)
 Frame = +3

Query: 3   RNKPDHALVQMGDGFQAELAVHFLKGAEVFGKRLEVNFSKHANITMGAETHEYLNSNLNR 182
           RNKPDHALVQMGDGFQAELAVHFLKGA +FGKR+EVNFSKH NIT GA+THEY++SNLNR
Sbjct: 277 RNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRMEVNFSKHPNITQGADTHEYMHSNLNR 336

Query: 183 FNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEIVSHLEEHGSIVNTKLFEMNGKKQALVL 362
           FNRNAAKNYRYCCSPTKMIHLSTLPQ +TE+EIVS +EEHG++VNTKLFEMNGKKQALVL
Sbjct: 337 FNRNAAKNYRYCCSPTKMIHLSTLPQVITEDEIVSLVEEHGTVVNTKLFEMNGKKQALVL 396

Query: 363 FETEEQATEALVCKHASSLGDSMIRISFSQLQTI 464
           FETEE+ATEALVCKHA+SL  S++RISFSQLQ+I
Sbjct: 397 FETEEEATEALVCKHATSLAGSIVRISFSQLQSI 430


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