BLASTX nr result

ID: Atractylodes22_contig00014863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014863
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis v...    87   2e-15
emb|CBI19930.3| unnamed protein product [Vitis vinifera]               87   2e-15
ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus ...    85   1e-14
ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_004144256.1| PREDICTED: F-box protein SKP2A-like [Cucumis...    83   4e-14

>ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis vinifera]
          Length = 370

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 39/45 (86%), Positives = 43/45 (95%)
 Frame = -3

Query: 137 WKDIPMELLMRIVCLLDDRTVIVASGVCSGWRDAICWGLTHLSLS 3
           WKD+PMELL+RIV L+DDRTVI+ASGVCSGWRDAIC GLTHLSLS
Sbjct: 39  WKDVPMELLLRIVALVDDRTVIMASGVCSGWRDAICLGLTHLSLS 83


>emb|CBI19930.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 39/45 (86%), Positives = 43/45 (95%)
 Frame = -3

Query: 137 WKDIPMELLMRIVCLLDDRTVIVASGVCSGWRDAICWGLTHLSLS 3
           WKD+PMELL+RIV L+DDRTVI+ASGVCSGWRDAIC GLTHLSLS
Sbjct: 97  WKDVPMELLLRIVALVDDRTVIMASGVCSGWRDAICLGLTHLSLS 141


>ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus communis]
           gi|223540477|gb|EEF42044.1| F-box/LRR-repeat protein,
           putative [Ricinus communis]
          Length = 373

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 38/45 (84%), Positives = 42/45 (93%)
 Frame = -3

Query: 137 WKDIPMELLMRIVCLLDDRTVIVASGVCSGWRDAICWGLTHLSLS 3
           WKDIPMELL+RIV L+DDRT+I+ASGVCSGWRDAIC GLTHL LS
Sbjct: 42  WKDIPMELLLRIVSLVDDRTIIMASGVCSGWRDAICLGLTHLCLS 86


>ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|222856121|gb|EEE93668.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 38/45 (84%), Positives = 42/45 (93%)
 Frame = -3

Query: 137 WKDIPMELLMRIVCLLDDRTVIVASGVCSGWRDAICWGLTHLSLS 3
           WKDIP+ELL+RIV L+DDRTVI+ASGVCSGWRDAIC GLTHL LS
Sbjct: 32  WKDIPVELLLRIVSLVDDRTVIMASGVCSGWRDAICMGLTHLCLS 76


>ref|XP_004144256.1| PREDICTED: F-box protein SKP2A-like [Cucumis sativus]
           gi|449517068|ref|XP_004165568.1| PREDICTED: F-box
           protein SKP2A-like [Cucumis sativus]
          Length = 376

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 37/45 (82%), Positives = 42/45 (93%)
 Frame = -3

Query: 137 WKDIPMELLMRIVCLLDDRTVIVASGVCSGWRDAICWGLTHLSLS 3
           WKDIPMELL++I+ L+DDRTVIVASGVC GWRDAIC+GL HLSLS
Sbjct: 45  WKDIPMELLLQILSLVDDRTVIVASGVCRGWRDAICFGLAHLSLS 89


Top