BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014829
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACD63086.1| RNA polymerase II largest subunit [Liriodendron t...   231   6e-59
emb|CBI18915.3| unnamed protein product [Vitis vinifera]              230   1e-58
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su...   230   1e-58
gb|ACD63085.1| RNA polymerase II largest subunit [Illicium parvi...   229   2e-58
gb|ACD63083.1| RNA polymerase II largest subunit [Ceratophyllum ...   228   4e-58

>gb|ACD63086.1| RNA polymerase II largest subunit [Liriodendron tulipifera]
          Length = 1010

 Score =  231 bits (588), Expect = 6e-59
 Identities = 110/122 (90%), Positives = 117/122 (95%)
 Frame = -3

Query: 367 KQINLIRTAAWHSETETGYLTPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVG 188
           KQINLIRT+AWHSE ETG++TPGDTQVRIE+GE++ GTLCKKTLG STGSLIHVIWEEVG
Sbjct: 516 KQINLIRTSAWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGSLIHVIWEEVG 575

Query: 187 PDAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQ 8
           PDAARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATME INETISKAKNEVKELI+AAQ
Sbjct: 576 PDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQ 635

Query: 7   DK 2
           DK
Sbjct: 636 DK 637


>emb|CBI18915.3| unnamed protein product [Vitis vinifera]
          Length = 1565

 Score =  230 bits (586), Expect = 1e-58
 Identities = 109/122 (89%), Positives = 118/122 (96%)
 Frame = -3

Query: 367  KQINLIRTAAWHSETETGYLTPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVG 188
            KQINL+RT+AWHSE+ETG++TPGDTQVRIEKGE++ GTLCKKTLG STGSLIHVIWEEVG
Sbjct: 645  KQINLLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVG 704

Query: 187  PDAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQ 8
            PDAARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATME INETISKAKNEVKELIRAAQ
Sbjct: 705  PDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQ 764

Query: 7    DK 2
            ++
Sbjct: 765  ER 766


>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
           vinifera]
          Length = 1848

 Score =  230 bits (586), Expect = 1e-58
 Identities = 109/122 (89%), Positives = 118/122 (96%)
 Frame = -3

Query: 367 KQINLIRTAAWHSETETGYLTPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVG 188
           KQINL+RT+AWHSE+ETG++TPGDTQVRIEKGE++ GTLCKKTLG STGSLIHVIWEEVG
Sbjct: 597 KQINLLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVG 656

Query: 187 PDAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQ 8
           PDAARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATME INETISKAKNEVKELIRAAQ
Sbjct: 657 PDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQ 716

Query: 7   DK 2
           ++
Sbjct: 717 ER 718


>gb|ACD63085.1| RNA polymerase II largest subunit [Illicium parviflorum]
          Length = 1013

 Score =  229 bits (584), Expect = 2e-58
 Identities = 109/122 (89%), Positives = 118/122 (96%)
 Frame = -3

Query: 367 KQINLIRTAAWHSETETGYLTPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVG 188
           KQINLIRT+AWHSE+ETG++TPGDT VRIEKGE+++GTLCKKTLG STGSLIHVIWEEVG
Sbjct: 519 KQINLIRTSAWHSESETGFITPGDTHVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVG 578

Query: 187 PDAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQ 8
           PDAARKFLGHTQWLVNYWLLQ GFSIGIGDTIADAATME INETISKAKNEVKELI+AAQ
Sbjct: 579 PDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQ 638

Query: 7   DK 2
           +K
Sbjct: 639 EK 640


>gb|ACD63083.1| RNA polymerase II largest subunit [Ceratophyllum demersum]
          Length = 1010

 Score =  228 bits (581), Expect = 4e-58
 Identities = 108/122 (88%), Positives = 117/122 (95%)
 Frame = -3

Query: 367 KQINLIRTAAWHSETETGYLTPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVG 188
           KQINLIRT+AWHSE ETG++TPGDTQVRIE+GE++ GTLCKKTLG STGSLIHVIWEEVG
Sbjct: 516 KQINLIRTSAWHSEAETGFITPGDTQVRIERGELLAGTLCKKTLGTSTGSLIHVIWEEVG 575

Query: 187 PDAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMETINETISKAKNEVKELIRAAQ 8
           PDAARKFLGHTQWLVNYWLLQ GFSIGIGDTIADA+TME INETISKAKNEVKELI+AAQ
Sbjct: 576 PDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINETISKAKNEVKELIKAAQ 635

Query: 7   DK 2
           +K
Sbjct: 636 EK 637