BLASTX nr result

ID: Atractylodes22_contig00014824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00014824
         (1588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote...   530   e-148
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote...   519   e-144
ref|XP_002510266.1| nuclear acid binding protein, putative [Rici...   512   e-142
ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional ...   506   e-141
ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding prote...   506   e-141

>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            2 [Vitis vinifera]
          Length = 418

 Score =  530 bits (1364), Expect = e-148
 Identities = 274/394 (69%), Positives = 299/394 (75%), Gaps = 6/394 (1%)
 Frame = -1

Query: 1390 WVAMQYPXXXXXXXXXXXAPSPANYPVTPHYMSYXXXXXXXXXXXXXXXQXXXXXXGENR 1211
            W+AMQYP            P   +YP   H+++Y               Q       +NR
Sbjct: 29   WMAMQYPAAAMVMQHQMMPPQ--HYP--QHFVAYHHQPHQYQHQHQQQHQQQQGSNADNR 84

Query: 1210 AIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAAEKVLQT 1031
             IWVGDLHNWMDE+YL SCFA+TGE+AS+KVIRNKQTG SEGYGFVEFFSHAAAEKVLQ 
Sbjct: 85   TIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQG 144

Query: 1030 YTCVVMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHETFANKYPSV 851
            Y  V+MPNT+QPFRLNWATFSMGDKRS+NG DLSIFVGDLA+DV+D+LLHETFA KYPSV
Sbjct: 145  YAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSV 204

Query: 850  KAAKVVVDINTGRSKGYGFVRFGDDNERTQAMSEMNGSYCSSRPMRIGAATPRKSSAYQQ 671
            KAAKVV D NTGRSKGYGFVRFGD+NER+QAM+EMNG YCSSRPMRIGAATPRKSS YQQ
Sbjct: 205  KAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQ 264

Query: 670  -----GGYMSNGGS-QSEGDFNNTTIFVGGLDPTVSDEDLRQPFTQYGEILSVKIPVGKG 509
                 GGY SNG S QS+GD  NTTIFVGGLDP VSDEDLRQPF+QYGEI+SVKIPVGKG
Sbjct: 265  QYSSHGGYASNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKG 324

Query: 508  CGFVQFANRNNAEEALQNLNGTPIGKQTVRLSWGRNPANKQLRNDFGNQWPVAXXXXXXX 329
            CGFVQFANRNNAE+ALQ LNGT IGKQTVRLSWGRNPANKQ+R DFGNQW  A       
Sbjct: 325  CGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQVY 384

Query: 328  XXXXYALQSPHDPSXXXXXXXXXXXXXTHQQQVS 227
                YAL  PHDP+              HQQQVS
Sbjct: 385  DGYGYALPPPHDPTMYAAAYGAYPVYGNHQQQVS 418


>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            1 [Vitis vinifera]
          Length = 409

 Score =  519 bits (1336), Expect = e-144
 Identities = 269/388 (69%), Positives = 295/388 (76%)
 Frame = -1

Query: 1390 WVAMQYPXXXXXXXXXXXAPSPANYPVTPHYMSYXXXXXXXXXXXXXXXQXXXXXXGENR 1211
            W+AMQYP            P   +YP   H+++Y               Q       +NR
Sbjct: 29   WMAMQYPAAAMVMQHQMMPPQ--HYP--QHFVAYHHQPHQYQHQHQQQHQQQQGSNADNR 84

Query: 1210 AIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAAEKVLQT 1031
             IWVGDLHNWMDE+YL SCFA+TGE+AS+KVIRNKQTG SEGYGFVEFFSHAAAEKVLQ 
Sbjct: 85   TIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQG 144

Query: 1030 YTCVVMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHETFANKYPSV 851
            Y  V+MPNT+QPFRLNWATFSMGDKRS+NG DLSIFVGDLA+DV+D+LLHETFA KYPSV
Sbjct: 145  YAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSV 204

Query: 850  KAAKVVVDINTGRSKGYGFVRFGDDNERTQAMSEMNGSYCSSRPMRIGAATPRKSSAYQQ 671
            KAAKVV D NTGRSKGYGFVRFGD+NER+QAM+EMNG YCSSRPMRIGAATPRKSS YQQ
Sbjct: 205  KAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQ 264

Query: 670  GGYMSNGGSQSEGDFNNTTIFVGGLDPTVSDEDLRQPFTQYGEILSVKIPVGKGCGFVQF 491
              Y S+   QS+GD  NTTIFVGGLDP VSDEDLRQPF+QYGEI+SVKIPVGKGCGFVQF
Sbjct: 265  -QYSSH--VQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQF 321

Query: 490  ANRNNAEEALQNLNGTPIGKQTVRLSWGRNPANKQLRNDFGNQWPVAXXXXXXXXXXXYA 311
            ANRNNAE+ALQ LNGT IGKQTVRLSWGRNPANKQ+R DFGNQW  A           YA
Sbjct: 322  ANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYA 381

Query: 310  LQSPHDPSXXXXXXXXXXXXXTHQQQVS 227
            L  PHDP+              HQQQVS
Sbjct: 382  LPPPHDPTMYAAAYGAYPVYGNHQQQVS 409


>ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
            gi|223550967|gb|EEF52453.1| nuclear acid binding protein,
            putative [Ricinus communis]
          Length = 443

 Score =  512 bits (1318), Expect = e-142
 Identities = 265/401 (66%), Positives = 295/401 (73%), Gaps = 13/401 (3%)
 Frame = -1

Query: 1390 WVAMQYPXXXXXXXXXXXAPSPANYPVTPHYMS-------YXXXXXXXXXXXXXXXQXXX 1232
            W+AMQYP            P     P   HYM+       +                   
Sbjct: 43   WMAMQYPAAAMVMQHQMLPPQHYAPPPPQHYMTAYHQYHHHHPHPHQPQQHHQNQGSSGG 102

Query: 1231 XXXGENRAIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAA 1052
               GENR +W+GDLH+WMDE+YL +CFASTGE+ SIKVIRNKQTG SEGYGFVEF++HA 
Sbjct: 103  GGGGENRTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTHAT 162

Query: 1051 AEKVLQTYTCVVMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHETF 872
            AEKVLQ Y  ++MPNTEQPFRLNWATFS GDKRS+N  DLSIFVGDLAADVTD+LLHETF
Sbjct: 163  AEKVLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHETF 222

Query: 871  ANKYPSVKAAKVVVDINTGRSKGYGFVRFGDDNERTQAMSEMNGSYCSSRPMRIGAATPR 692
             ++YPSVKAAKVV D NTGRSKGYGFVRFGDDNERTQAM+EMNG YCSSR MRIGAATPR
Sbjct: 223  VSRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRAMRIGAATPR 282

Query: 691  KSSAYQ-QGGYMSNGGS----QSEGDFNNTTIFVGGLDPTVSDEDLRQPFTQYGEILSVK 527
            KS+ YQ QGGY+SNG S    Q++GD  NTTIFVGGLDP V+DEDL+QPF+QYGEI+SVK
Sbjct: 283  KSTGYQHQGGYVSNGASGQAFQADGDSTNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVK 342

Query: 526  IPVGKGCGFVQFANRNNAEEALQNLNGTPIGKQTVRLSWGRNPANK-QLRNDFGNQWPVA 350
            IPVGKGCGFVQFA+R+NAEEALQ LNGT IGKQTVRLSWGRNPANK QLR+DFGNQW  A
Sbjct: 343  IPVGKGCGFVQFASRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQQLRSDFGNQWGGA 402

Query: 349  XXXXXXXXXXXYALQSPHDPSXXXXXXXXXXXXXTHQQQVS 227
                       YAL  PHDPS             +HQQQVS
Sbjct: 403  YYGGQIYDGYGYALPPPHDPSMYAAPYGAYPVYGSHQQQVS 443


>ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
            [Glycine max]
          Length = 401

 Score =  506 bits (1304), Expect = e-141
 Identities = 261/391 (66%), Positives = 284/391 (72%), Gaps = 3/391 (0%)
 Frame = -1

Query: 1390 WVAMQYPXXXXXXXXXXXAPSPANY---PVTPHYMSYXXXXXXXXXXXXXXXQXXXXXXG 1220
            WV MQYP            P P +Y   P  P++  Y                       
Sbjct: 21   WVPMQYPAAAAMVMPHHMLP-PQHYAPPPYVPYHHQYAAQPQHQHQNGSGG--------- 70

Query: 1219 ENRAIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAAEKV 1040
            EN+ IW+GDLH+WMDE+YL  CFASTGE++SIKVIRNKQTG SEGYGFVEF+SHA AEKV
Sbjct: 71   ENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKV 130

Query: 1039 LQTYTCVVMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHETFANKY 860
            LQ Y  ++MPN EQPFRLNWATFS GDK S+N  DLSIFVGDLAADVTD+LLHETFA+ Y
Sbjct: 131  LQNYAGILMPNAEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVY 190

Query: 859  PSVKAAKVVVDINTGRSKGYGFVRFGDDNERTQAMSEMNGSYCSSRPMRIGAATPRKSSA 680
            PSVKAAKVV D NTGRSKGYGFVRFGDDNERTQAM++MNG YCSSRPMRIGAATPRKSS 
Sbjct: 191  PSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPMRIGAATPRKSSG 250

Query: 679  YQQGGYMSNGGSQSEGDFNNTTIFVGGLDPTVSDEDLRQPFTQYGEILSVKIPVGKGCGF 500
            +QQGG  +   +QSE D  NTTIFVGGLDP VSDEDLRQPF+QYGEI+SVKIPVGKGCGF
Sbjct: 251  HQQGGLSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGF 310

Query: 499  VQFANRNNAEEALQNLNGTPIGKQTVRLSWGRNPANKQLRNDFGNQWPVAXXXXXXXXXX 320
            VQFANRNNAEEALQ LNGT IGKQTVRLSWGRNPANKQ R DFG+ W  A          
Sbjct: 311  VQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGSPWTGAYYGAPMYDGY 370

Query: 319  XYALQSPHDPSXXXXXXXXXXXXXTHQQQVS 227
             YAL   HDPS              HQQQVS
Sbjct: 371  GYALPPRHDPSIYAAAYGAYPLYGGHQQQVS 401


>ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
            [Glycine max]
          Length = 425

 Score =  506 bits (1302), Expect = e-141
 Identities = 250/331 (75%), Positives = 270/331 (81%)
 Frame = -1

Query: 1219 ENRAIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFSEGYGFVEFFSHAAAEKV 1040
            EN+ IW+GDLH+WMDE+YL  CFASTGE++SIKVIRNKQTG SEGYGFVEF+SHA AEKV
Sbjct: 95   ENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKV 154

Query: 1039 LQTYTCVVMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHETFANKY 860
            LQ Y  ++MPNTEQPFRLNWATFS GDK S+N  DLSIFVGDLAADVTD+LLHETFA+ Y
Sbjct: 155  LQNYAGILMPNTEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVY 214

Query: 859  PSVKAAKVVVDINTGRSKGYGFVRFGDDNERTQAMSEMNGSYCSSRPMRIGAATPRKSSA 680
            PSVKAAKVV D NTGRSKGYGFVRFGDDN+RTQAM++MNG YCSSRPMRIGAATPRKSS 
Sbjct: 215  PSVKAAKVVFDANTGRSKGYGFVRFGDDNQRTQAMTQMNGVYCSSRPMRIGAATPRKSSG 274

Query: 679  YQQGGYMSNGGSQSEGDFNNTTIFVGGLDPTVSDEDLRQPFTQYGEILSVKIPVGKGCGF 500
            +QQGG  +   +QSE D  NTTIFVGGLDP VSDEDLRQPF+QYGEI+SVKIPVGKGCGF
Sbjct: 275  HQQGGQSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGF 334

Query: 499  VQFANRNNAEEALQNLNGTPIGKQTVRLSWGRNPANKQLRNDFGNQWPVAXXXXXXXXXX 320
            VQFANRNNAEEALQ LNGT IGKQTVRLSWGRNPANKQ R DFGN W  A          
Sbjct: 335  VQFANRNNAEEALQKLNGTSIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPMYDGY 394

Query: 319  XYALQSPHDPSXXXXXXXXXXXXXTHQQQVS 227
             YAL   HDPS              HQQQVS
Sbjct: 395  GYALTPRHDPSIYAAAYGAYPLYGGHQQQVS 425



 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 9/190 (4%)
 Frame = -1

Query: 958 KRSNNGSDLSIFVGDLAADVTDTLLHETFANKYPSVKAAKVVVDINTGRSKGYGFVRFGD 779
           +  + G + +I++GDL   + +  LH  FA+    + + KV+ +  TG S+GYGFV F  
Sbjct: 89  QNGSGGENKTIWIGDLHHWMDENYLHRCFAST-GEISSIKVIRNKQTGLSEGYGFVEFYS 147

Query: 778 DNERTQAMSEMNGSYC--SSRPMRIGAATPRKSSAYQQGGYMSNGGSQSEGDFNNTTIFV 605
                + +    G     + +P R+  AT              + G +   +  + +IFV
Sbjct: 148 HATAEKVLQNYAGILMPNTEQPFRLNWAT-------------FSTGDKGSDNVPDLSIFV 194

Query: 604 GGLDPTVSDEDLRQPFTQ-YGEILSVKIPV------GKGCGFVQFANRNNAEEALQNLNG 446
           G L   V+D  L + F   Y  + + K+         KG GFV+F + N   +A+  +NG
Sbjct: 195 GDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNQRTQAMTQMNG 254

Query: 445 TPIGKQTVRL 416
                + +R+
Sbjct: 255 VYCSSRPMRI 264


Top